Genomic map of Gordonia phage Hail2Pitt (MH025889)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
MH025889
Definition
Gordonia phage Hail2Pitt, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Woesvirus; unclassified Woesvirus.
DB of origin
NUCCORE
Length
73659
Host Name
Gordonia terrae
Host domain
Bacteria
Is prophage?
undef
Number of proteins
91
%GC
59.11
Number of singletons
1
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
AVP43232.1 MH025889_p47 hypothetical protein phrog_1673 unknown function unknown function -1 47303 47530
AVP43210.1 MH025889_p25 minor tail protein phrog_5287 minor tail protein tail 1 31546 34077
AVP43188.1 MH025889_p2 DNA binding protein phrog_5311 helicase DNA, RNA and nucleotide metabolism -1 1106 3394
AVP43261.1 MH025889_p76 hypothetical protein phrog_9086 unknown function unknown function -1 62340 62579
AVP43205.1 MH025889_p19 hypothetical protein phrog_8128 neck protein connector 1 19061 19381
AVP43220.1 MH025889_p35 lysin A phrog_880 endolysin lysis 1 41009 41644
AVP43246.1 MH025889_p61 hypothetical protein phrog_7044 unknown function unknown function -1 55344 55703
AVP43197.1 MH025889_p11 capsid maturation proteasae phrog_976 head maturation protease head and packaging 1 14051 15265
AVP43230.1 MH025889_p45 DNA methylase phrog_67 DNA methyltransferase other -1 46189 46908
AVP43238.1 MH025889_p53 DNA polymerase III subunit phrog_192 DNA polymerase exonuclease subunit DNA, RNA and nucleotide metabolism -1 50303 50929
AVP43234.1 MH025889_p49 resolvase phrog_140 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism -1 48041 48610
AVP43214.1 MH025889_p29 membrane protein phrog_17340 membrane protein moron, auxiliary metabolic gene and host takeover 1 38428 38598
AVP43270.1 MH025889_p85 hypothetical protein phrog_14257 unknown function unknown function -1 69105 69236
AVP43213.1 MH025889_p28 membrane protein phrog_11737 minor tail protein tail 1 37843 38418
AVP43191.1 MH025889_p5 DNA primase phrog_5362 DNA primase DNA, RNA and nucleotide metabolism -1 3837 4751
AVP43204.1 MH025889_p18 hypothetical protein phrog_5299 unknown function unknown function 1 18561 19046
AVP43269.1 MH025889_p84 hypothetical protein phrog_6032 unknown function unknown function -1 68082 69080
AVP43207.1 MH025889_p22 tail assembly chaperone phrog_3096 tail assembly chaperone tail 1 20603 21196
AVP43235.1 MH025889_p50 hypothetical protein phrog_355 nucleoside 2-deoxyribosyltransferase DNA, RNA and nucleotide metabolism -1 48603 48968
AVP43277.1 MH025889_p21 tail assembly chaperone phrog_3096 tail assembly chaperone tail 1 20603 21471
AVP43199.1 MH025889_p13 major capsid protein phrog_29 major head protein head and packaging 1 15785 16984
AVP43194.1 MH025889_p8 portal protein phrog_113 portal protein head and packaging 1 8378 11167
AVP43265.1 MH025889_p80 AAA-ATPase phrog_5424 ATPase other -1 65017 66576
AVP43259.1 MH025889_p74 hypothetical protein phrog_6646 unknown function unknown function -1 61226 61651
AVP43253.1 MH025889_p68 hypothetical protein phrog_7963 unknown function unknown function -1 58868 59113
AVP43189.1 MH025889_p3 hypothetical protein phrog_7096 unknown function unknown function -1 3391 3588
AVP43264.1 MH025889_p79 cobalamin biosynthesis protein phrog_5298 cobalamin biosynthesis protein moron, auxiliary metabolic gene and host takeover -1 63104 65020
AVP43196.1 MH025889_p10 hypothetical protein phrog_6679 unknown function unknown function 1 13731 14036
AVP43227.1 MH025889_p42 endonuclease/helicase phrog_6890 endonuclease DNA, RNA and nucleotide metabolism -1 45415 45837
AVP43228.1 MH025889_p43 hypothetical protein phrog_10595 unknown function unknown function -1 45870 46031
AVP43267.1 MH025889_p82 hypothetical protein phrog_9936 unknown function unknown function -1 67295 67645
AVP43200.1 MH025889_p14 hypothetical protein phrog_7074 head-tail connector protein connector 1 16994 17188
AVP43243.1 MH025889_p58 hypothetical protein phrog_22138 unknown function unknown function -1 53448 53738
AVP43203.1 MH025889_p17 hypothetical protein phrog_26 tail completion or Neck1 protein connector 1 18070 18564
AVP43206.1 MH025889_p20 major tail protein phrog_290 minor tail protein tail 1 19385 20404
AVP43225.1 MH025889_p40 hypothetical protein phrog_10322 unknown function unknown function -1 43790 44035
AVP43257.1 MH025889_p72 hypothetical protein phrog_7690 unknown function unknown function -1 60347 60751
AVP43250.1 MH025889_p65 hypothetical protein phrog_6792 unknown function unknown function -1 56765 57280
AVP43217.1 MH025889_p32 hypothetical protein phrog_240 head protein head and packaging 1 39744 40109
AVP43254.1 MH025889_p69 hypothetical protein phrog_5406 unknown function unknown function -1 59174 59911
AVP43273.1 MH025889_p88 hypothetical protein phrog_9304 unknown function unknown function -1 70775 70933
AVP43193.1 MH025889_p7 terminase large subunit phrog_2 terminase large subunit head and packaging 1 6282 8258
AVP43192.1 MH025889_p6 terminase small subunit phrog_6902 terminase small subunit head and packaging 1 4892 6289
AVP43211.1 MH025889_p26 minor tail protein phrog_1887 tail protein tail 1 34077 35816
AVP43256.1 MH025889_p71 hypothetical protein phrog_18170 unknown function unknown function -1 60087 60314
AVP43223.1 MH025889_p38 hypothetical protein phrog_2344 unknown function unknown function 1 42929 43468
AVP43274.1 MH025889_p89 hypothetical protein phrog_12137 unknown function unknown function -1 71047 71367
AVP43263.1 MH025889_p78 hypothetical protein phrog_4480 unknown function unknown function -1 62817 63107
AVP43187.1 MH025889_p1 hypothetical protein phrog_7062 unknown function unknown function -1 840 1109
AVP43201.1 MH025889_p15 hypothetical protein phrog_6879 head-tail connector protein connector 1 17270 17557
AVP43198.1 MH025889_p12 scaffolding protein phrog_5455 head decoration head and packaging 1 15302 15772
AVP43224.1 MH025889_p39 membrane protein phrog_2525 unknown function unknown function 1 43461 43793
AVP43222.1 MH025889_p37 membrane protein phrog_2272 unknown function unknown function 1 42480 42932
AVP43239.1 MH025889_p54 helix-turn-helix DNA binding domain protein phrog_6401 DNA binding protein DNA, RNA and nucleotide metabolism -1 50926 51120
AVP43258.1 MH025889_p73 hypothetical protein phrog_16387 unknown function unknown function -1 60753 61076
AVP43236.1 MH025889_p51 DNA polymerase III sliding clamp beta phrog_947 DNA polymerase processivity factor DNA, RNA and nucleotide metabolism -1 48968 50101
AVP43271.1 MH025889_p86 hypothetical protein phrog_26788 unknown function unknown function -1 69233 69415
AVP43260.1 MH025889_p75 hypothetical protein phrog_1342 unknown function unknown function -1 61773 62336
AVP43249.1 MH025889_p64 hypothetical protein phrog_6622 unknown function unknown function -1 56127 56753
AVP43237.1 MH025889_p52 hypothetical protein phrog_16978 unknown function unknown function -1 50103 50300
AVP43215.1 MH025889_p30 minor tail protein phrog_416 minor tail protein tail 1 38595 39497
AVP43266.1 MH025889_p81 hypothetical protein phrog_7008 unknown function unknown function -1 66657 67298
AVP43272.1 MH025889_p87 hypothetical protein phrog_6708 unknown function unknown function -1 69624 70568
AVP43244.1 MH025889_p59 hypothetical protein phrog_5686 unknown function unknown function -1 53855 54919
AVP43212.1 MH025889_p27 minor tail protein phrog_746 minor tail protein tail 1 35816 37840
AVP43242.1 MH025889_p57 hypothetical protein phrog_8951 unknown function unknown function -1 53170 53451
AVP43276.1 MH025889_p91 hypothetical protein phrog_10038 unknown function unknown function -1 71672 72079
AVP43218.1 MH025889_p33 membrane protein phrog_565 holin lysis 1 40180 40617
AVP43209.1 MH025889_p24 tape measure protein phrog_5448 tail length tape measure protein tail 1 21581 31549
AVP43202.1 MH025889_p16 hypothetical protein phrog_195 head-tail adaptor connector 1 17564 18082
AVP43255.1 MH025889_p70 hypothetical protein phrog_10275 unknown function unknown function -1 59911 60087
AVP43195.1 MH025889_p9 structural protein phrog_23819 virion structural protein head and packaging 1 11154 13664
AVP43221.1 MH025889_p36 lysin A phrog_6985 endolysin lysis 1 41641 42474
AVP43240.1 MH025889_p55 hypothetical protein phrog_10671 unknown function unknown function -1 51388 51687
AVP43252.1 MH025889_p67 hypothetical protein phrog_10570 unknown function unknown function -1 57536 58429
AVP43233.1 MH025889_p48 nucleotide pyrophosphohydrolase phrog_3301 pyrophosphatase other -1 47527 48030
AVP43229.1 MH025889_p44 hypothetical protein phrog_10268 unknown function unknown function -1 46032 46166
AVP43241.1 MH025889_p56 DNA helicase phrog_62 DNA helicase DNA, RNA and nucleotide metabolism -1 51684 53096
AVP43190.1 MH025889_p4 hypothetical protein phrog_8352 unknown function unknown function -1 3593 3712
AVP43251.1 MH025889_p66 hypothetical protein phrog_6495 unknown function unknown function -1 57270 57494
AVP43208.1 MH025889_p23 hypothetical protein singleton unknown function unknown function 1 21437 21577
AVP43248.1 MH025889_p63 hypothetical protein phrog_8296 unknown function unknown function -1 55999 56127
AVP43216.1 MH025889_p31 hypothetical protein phrog_6030 unknown function unknown function 1 39518 39742
AVP43226.1 MH025889_p41 exonuclease phrog_69 exonuclease DNA, RNA and nucleotide metabolism -1 44037 45239
AVP43275.1 MH025889_p90 hypothetical protein phrog_15601 unknown function unknown function -1 71470 71661
AVP43245.1 MH025889_p60 helix-turn-helix DNA binding domain protein phrog_6746 unknown function unknown function -1 55024 55347
AVP43231.1 MH025889_p46 hypothetical protein phrog_8142 unknown function unknown function -1 47031 47300
AVP43247.1 MH025889_p62 hypothetical protein phrog_9303 unknown function unknown function -1 55706 56002
AVP43268.1 MH025889_p83 hypothetical protein phrog_7001 unknown function unknown function -1 67645 68082
AVP43262.1 MH025889_p77 hypothetical protein phrog_10697 unknown function unknown function -1 62572 62820
AVP43219.1 MH025889_p34 membrane protein phrog_6901 unknown function unknown function 1 40692 41012