Genomic map of Acinetobacter phage vB_AbaP_D2 (MH042230)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
MH042230
Definition
Acinetobacter phage vB_AbaP_D2, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Autographiviridae; Beijerinckvirinae; Friunavirus; Acinetobacter virus D2.
DB of origin
NUCCORE
Length
39964
Host Name
Acinetobacter baumannii
Host domain
Bacteria
Is prophage?
undef
Number of proteins
47
%GC
39.23
Number of singletons
1
Number of paralogs
2

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
AVP40482.1 MH042230_p12 hypothetical protein phrog_11839 membrane protein moron, auxiliary metabolic gene and host takeover 1 11376 11489
AVP40471.1 MH042230_p1 internal virion protein phrog_342 internal virion protein with endolysin domain head and packaging 1 78 3176
AVP40506.1 MH042230_p36 hypothetical protein phrog_221 metallo-phosphoesterase other 1 25165 26100
AVP40512.1 MH042230_p42 capsid and scaffold protein phrog_1018 head scaffolding protein head and packaging 1 31295 32155
AVP40477.1 MH042230_p7 hypothetical protein phrog_8403 DNA binding protein DNA, RNA and nucleotide metabolism 1 8665 8799
AVP40516.1 MH042230_p46 tail tubular protein A phrog_457 tail protein tail 1 34169 36460
AVP40474.1 MH042230_p4 endolysin phrog_181 endolysin lysis 1 5797 6354
AVP40502.1 MH042230_p32 hypothetical protein phrog_862 unknown function unknown function 1 22249 23139
AVP40498.1 MH042230_p28 ATP-dependent DNA ligase phrog_114 ATP-dependent DNA ligase DNA, RNA and nucleotide metabolism 1 17781 18740
AVP40513.1 MH042230_p43 capsid protein phrog_267 major head protein head and packaging 1 32171 33202
AVP40475.1 MH042230_p5 hypothetical protein phrog_891 terminase small subunit head and packaging 1 6413 6721
AVP40479.1 MH042230_p9 hypothetical protein singleton unknown function unknown function 1 9897 10064
AVP40487.1 MH042230_p17 hypothetical protein phrog_6769 unknown function unknown function 1 12641 13039
AVP40483.1 MH042230_p13 hypothetical protein phrog_4445 unknown function unknown function 1 11476 11709
AVP40472.1 MH042230_p2 tail fiber protein phrog_3918 tail fiber protein tail 1 3183 5282
AVP40491.1 MH042230_p21 hypothetical protein phrog_2827 unknown function unknown function 1 14374 14592
AVP40505.1 MH042230_p35 DNA endonuclease VII phrog_423 endonuclease VII DNA, RNA and nucleotide metabolism 1 24721 25161
AVP40490.1 MH042230_p20 hypothetical protein phrog_7079 unknown function unknown function 1 14043 14210
AVP40486.1 MH042230_p16 hypothetical protein phrog_13611 unknown function unknown function 1 12468 12632
AVP40496.1 MH042230_p26 hypothetical protein phrog_7038 unknown function unknown function 1 16231 16467
AVP40510.1 MH042230_p40 structural protein phrog_4893 unknown function unknown function 1 29470 29721
AVP40473.1 MH042230_p3 holin phrog_126 holin/anti-holin lysis 1 5475 5810
AVP40492.1 MH042230_p22 hypothetical protein phrog_2827 unknown function unknown function 1 14582 14806
AVP40504.1 MH042230_p34 homing endonuclease phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism 1 24287 24724
AVP40511.1 MH042230_p41 head-tail connector protein phrog_449 head-tail adaptor connector 1 29730 31286
AVP40484.1 MH042230_p14 hypothetical protein phrog_7131 unknown function unknown function 1 11784 12380
AVP40517.1 MH042230_p47 internal virion protein B phrog_6056 internal virion protein head and packaging 1 36460 37134
AVP40515.1 MH042230_p45 tail tubular protein A phrog_446 tail protein tail 1 33600 34160
AVP40480.1 MH042230_p10 hypothetical protein phrog_1448 unknown function unknown function 1 10500 11009
AVP40476.1 MH042230_p6 DNA maturase B phrog_38 terminase large subunit head and packaging 1 6731 8668
AVP40488.1 MH042230_p18 hypothetical protein phrog_6421 unknown function unknown function 1 13117 13596
AVP40493.1 MH042230_p23 DNA primase/helicase phrog_47 DNA primase DNA, RNA and nucleotide metabolism 1 14796 15596
AVP40485.1 MH042230_p15 hypothetical protein phrog_9054 unknown function unknown function 1 12368 12481
AVP40509.1 MH042230_p39 hypothetical protein phrog_5394 unknown function unknown function 1 29276 29473
AVP40478.1 MH042230_p8 hypothetical protein phrog_6687 unknown function unknown function 1 8759 8962
AVP40481.1 MH042230_p11 hypothetical protein phrog_6323 unknown function unknown function 1 11011 11385
AVP40497.1 MH042230_p27 DNA helicase phrog_19 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism 1 16480 17778
AVP40514.1 MH042230_p44 hypothetical protein phrog_6633 tail protein tail 1 33259 33444
AVP40494.1 MH042230_p24 hypothetical protein phrog_17267 unknown function unknown function 1 15741 15914
AVP40499.1 MH042230_p29 HNH endonuclease phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism 1 19000 19446
AVP40507.1 MH042230_p37 dNMP kinase phrog_139 deoxynucleoside monophosphate kinase other 1 26100 26747
AVP40503.1 MH042230_p33 DNA exonuclease phrog_107 exonuclease DNA, RNA and nucleotide metabolism 1 23350 24306
AVP40489.1 MH042230_p19 hypothetical protein phrog_7359 unknown function unknown function 1 13598 14032
AVP40508.1 MH042230_p38 RNA polymerase phrog_414 RNA polymerase DNA, RNA and nucleotide metabolism 1 26756 29173
AVP40495.1 MH042230_p25 hypothetical protein phrog_7630 unknown function unknown function 1 15914 16231
AVP40501.1 MH042230_p31 HNH endonuclease phrog_99 HNH endonuclease DNA, RNA and nucleotide metabolism 1 21752 22231
AVP40500.1 MH042230_p30 DNA polymerase phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism 1 19443 21743