| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
MH042230 |
Definition |
Acinetobacter phage vB_AbaP_D2, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Autographiviridae; Beijerinckvirinae; Friunavirus; Acinetobacter virus D2. |
DB of origin |
NUCCORE |
Length |
39964 |
Host Name |
Acinetobacter baumannii |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
47 |
%GC |
39.23 |
Number of singletons |
1 |
Number of paralogs |
2 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| AVP40482.1 | MH042230_p12 | hypothetical protein | phrog_11839 | membrane protein | moron, auxiliary metabolic gene and host takeover | 1 | 11376 | 11489 |
| AVP40471.1 | MH042230_p1 | internal virion protein | phrog_342 | internal virion protein with endolysin domain | head and packaging | 1 | 78 | 3176 |
| AVP40506.1 | MH042230_p36 | hypothetical protein | phrog_221 | metallo-phosphoesterase | other | 1 | 25165 | 26100 |
| AVP40512.1 | MH042230_p42 | capsid and scaffold protein | phrog_1018 | head scaffolding protein | head and packaging | 1 | 31295 | 32155 |
| AVP40477.1 | MH042230_p7 | hypothetical protein | phrog_8403 | DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 8665 | 8799 |
| AVP40516.1 | MH042230_p46 | tail tubular protein A | phrog_457 | tail protein | tail | 1 | 34169 | 36460 |
| AVP40474.1 | MH042230_p4 | endolysin | phrog_181 | endolysin | lysis | 1 | 5797 | 6354 |
| AVP40502.1 | MH042230_p32 | hypothetical protein | phrog_862 | unknown function | unknown function | 1 | 22249 | 23139 |
| AVP40498.1 | MH042230_p28 | ATP-dependent DNA ligase | phrog_114 | ATP-dependent DNA ligase | DNA, RNA and nucleotide metabolism | 1 | 17781 | 18740 |
| AVP40513.1 | MH042230_p43 | capsid protein | phrog_267 | major head protein | head and packaging | 1 | 32171 | 33202 |
| AVP40475.1 | MH042230_p5 | hypothetical protein | phrog_891 | terminase small subunit | head and packaging | 1 | 6413 | 6721 |
| AVP40479.1 | MH042230_p9 | hypothetical protein | singleton | unknown function | unknown function | 1 | 9897 | 10064 |
| AVP40487.1 | MH042230_p17 | hypothetical protein | phrog_6769 | unknown function | unknown function | 1 | 12641 | 13039 |
| AVP40483.1 | MH042230_p13 | hypothetical protein | phrog_4445 | unknown function | unknown function | 1 | 11476 | 11709 |
| AVP40472.1 | MH042230_p2 | tail fiber protein | phrog_3918 | tail fiber protein | tail | 1 | 3183 | 5282 |
| AVP40491.1 | MH042230_p21 | hypothetical protein | phrog_2827 | unknown function | unknown function | 1 | 14374 | 14592 |
| AVP40505.1 | MH042230_p35 | DNA endonuclease VII | phrog_423 | endonuclease VII | DNA, RNA and nucleotide metabolism | 1 | 24721 | 25161 |
| AVP40490.1 | MH042230_p20 | hypothetical protein | phrog_7079 | unknown function | unknown function | 1 | 14043 | 14210 |
| AVP40486.1 | MH042230_p16 | hypothetical protein | phrog_13611 | unknown function | unknown function | 1 | 12468 | 12632 |
| AVP40496.1 | MH042230_p26 | hypothetical protein | phrog_7038 | unknown function | unknown function | 1 | 16231 | 16467 |
| AVP40510.1 | MH042230_p40 | structural protein | phrog_4893 | unknown function | unknown function | 1 | 29470 | 29721 |
| AVP40473.1 | MH042230_p3 | holin | phrog_126 | holin/anti-holin | lysis | 1 | 5475 | 5810 |
| AVP40492.1 | MH042230_p22 | hypothetical protein | phrog_2827 | unknown function | unknown function | 1 | 14582 | 14806 |
| AVP40504.1 | MH042230_p34 | homing endonuclease | phrog_59 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 24287 | 24724 |
| AVP40511.1 | MH042230_p41 | head-tail connector protein | phrog_449 | head-tail adaptor | connector | 1 | 29730 | 31286 |
| AVP40484.1 | MH042230_p14 | hypothetical protein | phrog_7131 | unknown function | unknown function | 1 | 11784 | 12380 |
| AVP40517.1 | MH042230_p47 | internal virion protein B | phrog_6056 | internal virion protein | head and packaging | 1 | 36460 | 37134 |
| AVP40515.1 | MH042230_p45 | tail tubular protein A | phrog_446 | tail protein | tail | 1 | 33600 | 34160 |
| AVP40480.1 | MH042230_p10 | hypothetical protein | phrog_1448 | unknown function | unknown function | 1 | 10500 | 11009 |
| AVP40476.1 | MH042230_p6 | DNA maturase B | phrog_38 | terminase large subunit | head and packaging | 1 | 6731 | 8668 |
| AVP40488.1 | MH042230_p18 | hypothetical protein | phrog_6421 | unknown function | unknown function | 1 | 13117 | 13596 |
| AVP40493.1 | MH042230_p23 | DNA primase/helicase | phrog_47 | DNA primase | DNA, RNA and nucleotide metabolism | 1 | 14796 | 15596 |
| AVP40485.1 | MH042230_p15 | hypothetical protein | phrog_9054 | unknown function | unknown function | 1 | 12368 | 12481 |
| AVP40509.1 | MH042230_p39 | hypothetical protein | phrog_5394 | unknown function | unknown function | 1 | 29276 | 29473 |
| AVP40478.1 | MH042230_p8 | hypothetical protein | phrog_6687 | unknown function | unknown function | 1 | 8759 | 8962 |
| AVP40481.1 | MH042230_p11 | hypothetical protein | phrog_6323 | unknown function | unknown function | 1 | 11011 | 11385 |
| AVP40497.1 | MH042230_p27 | DNA helicase | phrog_19 | DnaB-like replicative helicase | DNA, RNA and nucleotide metabolism | 1 | 16480 | 17778 |
| AVP40514.1 | MH042230_p44 | hypothetical protein | phrog_6633 | tail protein | tail | 1 | 33259 | 33444 |
| AVP40494.1 | MH042230_p24 | hypothetical protein | phrog_17267 | unknown function | unknown function | 1 | 15741 | 15914 |
| AVP40499.1 | MH042230_p29 | HNH endonuclease | phrog_59 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 19000 | 19446 |
| AVP40507.1 | MH042230_p37 | dNMP kinase | phrog_139 | deoxynucleoside monophosphate kinase | other | 1 | 26100 | 26747 |
| AVP40503.1 | MH042230_p33 | DNA exonuclease | phrog_107 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 23350 | 24306 |
| AVP40489.1 | MH042230_p19 | hypothetical protein | phrog_7359 | unknown function | unknown function | 1 | 13598 | 14032 |
| AVP40508.1 | MH042230_p38 | RNA polymerase | phrog_414 | RNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 26756 | 29173 |
| AVP40495.1 | MH042230_p25 | hypothetical protein | phrog_7630 | unknown function | unknown function | 1 | 15914 | 16231 |
| AVP40501.1 | MH042230_p31 | HNH endonuclease | phrog_99 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 21752 | 22231 |
| AVP40500.1 | MH042230_p30 | DNA polymerase | phrog_17 | DNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 19443 | 21743 |