| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
MH045558 |
Definition |
Microbacterium phage Dave, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Ilzatvirus; unclassified Ilzatvirus. |
DB of origin |
NUCCORE |
Length |
41858 |
Host Name |
Microbacterium foliorum |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
63 |
%GC |
63.41 |
Number of singletons |
0 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| AVR56204.1 | MH045558_p2 | terminase | phrog_38 | terminase large subunit | head and packaging | 1 | 522 | 1922 |
| AVR56235.1 | MH045558_p33 | hypothetical protein | phrog_4669 | unknown function | unknown function | -1 | 22176 | 22418 |
| AVR56227.1 | MH045558_p25 | membrane protein | phrog_4153 | membrane protein | moron, auxiliary metabolic gene and host takeover | 1 | 19088 | 19477 |
| AVR56225.1 | MH045558_p23 | minor tail protein | phrog_3432 | minor tail protein | tail | 1 | 16082 | 18217 |
| AVR56246.1 | MH045558_p44 | hypothetical protein | phrog_4570 | unknown function | unknown function | -1 | 31995 | 32273 |
| AVR56237.1 | MH045558_p35 | nuclease | phrog_93 | endonuclease | DNA, RNA and nucleotide metabolism | -1 | 24061 | 24354 |
| AVR56211.1 | MH045558_p9 | hypothetical protein | phrog_4055 | unknown function | unknown function | 1 | 6105 | 6518 |
| AVR56244.1 | MH045558_p42 | phosphoesterase | phrog_755 | RNA ligase | DNA, RNA and nucleotide metabolism | -1 | 31109 | 31702 |
| AVR56218.1 | MH045558_p16 | tail assembly chaperone | phrog_4537 | tail assembly chaperone | tail | 1 | 8957 | 9328 |
| AVR56221.1 | MH045558_p19 | minor tail protein | phrog_3475 | minor tail protein | tail | 1 | 12393 | 14816 |
| AVR56229.1 | MH045558_p27 | hypothetical protein | phrog_7870 | unknown function | unknown function | 1 | 19883 | 20293 |
| AVR56210.1 | MH045558_p8 | hypothetical protein | phrog_8662 | unknown function | unknown function | 1 | 5951 | 6076 |
| AVR56233.1 | MH045558_p31 | hypothetical protein | phrog_4265 | unknown function | unknown function | -1 | 20942 | 21784 |
| AVR56214.1 | MH045558_p12 | hypothetical protein | phrog_4076 | unknown function | unknown function | 1 | 7232 | 7597 |
| AVR56247.1 | MH045558_p45 | nucleotide pyrophosphohydrolase | phrog_4159 | nucleotide pyrophosphohydrolase | other | -1 | 32273 | 33079 |
| AVR56203.1 | MH045558_p1 | hypothetical protein | phrog_3678 | unknown function | unknown function | 1 | 1 | 525 |
| AVR56222.1 | MH045558_p20 | hypothetical protein | phrog_3473 | unknown function | unknown function | 1 | 14816 | 15001 |
| AVR56209.1 | MH045558_p7 | hypothetical protein | phrog_5501 | unknown function | unknown function | 1 | 5631 | 5879 |
| AVR56252.1 | MH045558_p50 | hypothetical protein | phrog_4198 | unknown function | unknown function | -1 | 35597 | 35893 |
| AVR56259.1 | MH045558_p57 | hypothetical protein | phrog_4626 | unknown function | unknown function | -1 | 38383 | 38688 |
| AVR56216.1 | MH045558_p14 | major tail protein | phrog_2491 | major tail protein | tail | 1 | 7845 | 8342 |
| AVR56240.1 | MH045558_p38 | exonuclease | phrog_1218 | exonuclease | DNA, RNA and nucleotide metabolism | -1 | 25895 | 27070 |
| AVR56228.1 | MH045558_p26 | holin | phrog_1299 | holin | lysis | 1 | 19482 | 19823 |
| AVR56230.1 | MH045558_p28 | hypothetical protein | phrog_4288 | unknown function | unknown function | -1 | 20361 | 20549 |
| AVR56263.1 | MH045558_p61 | hypothetical protein | phrog_4362 | unknown function | unknown function | -1 | 40081 | 40440 |
| AVR56223.1 | MH045558_p21 | hypothetical protein | phrog_4065 | unknown function | unknown function | 1 | 14998 | 15594 |
| AVR56206.1 | MH045558_p4 | capsid maturation protease | phrog_1657 | head morphogenesis | head and packaging | 1 | 3356 | 4024 |
| AVR56207.1 | MH045558_p5 | scaffolding protein | phrog_4080 | scaffolding protein | head and packaging | 1 | 4108 | 4668 |
| AVR56243.1 | MH045558_p41 | DNA helicase | phrog_62 | DNA helicase | DNA, RNA and nucleotide metabolism | -1 | 29721 | 31109 |
| AVR56245.1 | MH045558_p43 | hypothetical protein | phrog_4283 | unknown function | unknown function | -1 | 31699 | 31995 |
| AVR56249.1 | MH045558_p47 | hypothetical protein | phrog_4121 | thymidylate kinase | other | -1 | 33779 | 34360 |
| AVR56253.1 | MH045558_p51 | thymidylate synthase | phrog_160 | thymidylate synthase | DNA, RNA and nucleotide metabolism | -1 | 35890 | 36657 |
| AVR56258.1 | MH045558_p56 | hypothetical protein | phrog_4816 | unknown function | unknown function | -1 | 38150 | 38344 |
| AVR56219.1 | MH045558_p17 | tape measure protein | phrog_58 | tail length tape measure protein | tail | 1 | 9353 | 11623 |
| AVR56255.1 | MH045558_p53 | hypothetical protein | phrog_4634 | unknown function | unknown function | -1 | 37068 | 37292 |
| AVR56250.1 | MH045558_p48 | glycosyltransferase | phrog_4519 | glycosyltransferase | moron, auxiliary metabolic gene and host takeover | -1 | 34376 | 35308 |
| AVR56248.1 | MH045558_p46 | hypothetical protein | phrog_4086 | unknown function | unknown function | -1 | 33076 | 33801 |
| AVR56261.1 | MH045558_p59 | hypothetical protein | phrog_421 | unknown function | unknown function | -1 | 38873 | 39604 |
| AVR56231.1 | MH045558_p29 | hypothetical protein | phrog_4552 | unknown function | unknown function | -1 | 20620 | 20790 |
| AVR56262.1 | MH045558_p60 | hypothetical protein | phrog_4158 | unknown function | unknown function | -1 | 39698 | 40084 |
| AVR56257.1 | MH045558_p55 | hypothetical protein | phrog_3939 | unknown function | unknown function | -1 | 37762 | 38058 |
| AVR56232.1 | MH045558_p30 | hypothetical protein | phrog_5430 | unknown function | unknown function | -1 | 20787 | 20945 |
| AVR56224.1 | MH045558_p22 | hypothetical protein | phrog_4108 | unknown function | unknown function | 1 | 15594 | 16082 |
| AVR56205.1 | MH045558_p3 | portal protein | phrog_4142 | portal protein | head and packaging | 1 | 1953 | 3350 |
| AVR56239.1 | MH045558_p37 | AAA-ATPase | phrog_124 | Sak4-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | -1 | 25230 | 25898 |
| AVR56238.1 | MH045558_p36 | hypothetical protein | phrog_3724 | unknown function | unknown function | -1 | 24358 | 25197 |
| AVR56234.1 | MH045558_p32 | hypothetical protein | phrog_8629 | unknown function | unknown function | -1 | 21828 | 22166 |
| AVR56226.1 | MH045558_p24 | lysin A | phrog_2649 | endolysin | lysis | 1 | 18247 | 19053 |
| AVR56265.1 | MH045558_p63 | hypothetical protein | phrog_4232 | unknown function | unknown function | 1 | 41033 | 41674 |
| AVR56260.1 | MH045558_p58 | hypothetical protein | phrog_4304 | unknown function | unknown function | -1 | 38685 | 38870 |
| AVR56212.1 | MH045558_p10 | hypothetical protein | phrog_4111 | unknown function | unknown function | 1 | 6484 | 6897 |
| AVR56236.1 | MH045558_p34 | DNA recombinase | phrog_3123 | unknown function | unknown function | -1 | 22415 | 24085 |
| AVR56264.1 | MH045558_p62 | hypothetical protein | phrog_4674 | unknown function | unknown function | -1 | 40437 | 40670 |
| AVR56254.1 | MH045558_p52 | hypothetical protein | phrog_4607 | unknown function | unknown function | -1 | 36777 | 37007 |
| AVR56208.1 | MH045558_p6 | major capsid protein | phrog_10 | major head protein | head and packaging | 1 | 4708 | 5634 |
| AVR56213.1 | MH045558_p11 | hypothetical protein | phrog_5 | tail completion or Neck1 protein | connector | 1 | 6894 | 7235 |
| AVR56256.1 | MH045558_p54 | hypothetical protein | phrog_21301 | unknown function | unknown function | -1 | 37357 | 37713 |
| AVR56241.1 | MH045558_p39 | DNA polymerase I | phrog_17 | DNA polymerase | DNA, RNA and nucleotide metabolism | -1 | 27057 | 28922 |
| AVR56220.1 | MH045558_p18 | minor tail protein | phrog_33 | distal tail protein Dit | tail | 1 | 11620 | 12393 |
| AVR56217.1 | MH045558_p15 | tail assembly chaperone | phrog_4129 | tail assembly chaperone | tail | 1 | 8373 | 8942 |
| AVR56242.1 | MH045558_p40 | hypothetical protein | phrog_4077 | unknown function | unknown function | -1 | 29122 | 29550 |
| AVR56215.1 | MH045558_p13 | hypothetical protein | phrog_4058 | unknown function | unknown function | 1 | 7594 | 7830 |
| AVR56251.1 | MH045558_p49 | hypothetical protein | phrog_5300 | unknown function | unknown function | -1 | 35301 | 35534 |