Genomic map of Microbacterium phage Nagem (MH045560)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
MH045560
Definition
Microbacterium phage Nagem, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Ilzatvirus; unclassified Ilzatvirus.
DB of origin
NUCCORE
Length
41846
Host Name
Microbacterium foliorum
Host domain
Bacteria
Is prophage?
undef
Number of proteins
63
%GC
63.48
Number of singletons
0
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
AVR56387.1 MH045560_p59 hypothetical protein phrog_421 unknown function unknown function -1 38860 39591
AVR56344.1 MH045560_p15 tail assembly chaperone phrog_4129 tail assembly chaperone tail 1 8378 8947
AVR56351.1 MH045560_p22 hypothetical protein phrog_4108 unknown function unknown function 1 15602 16090
AVR56330.1 MH045560_p1 hypothetical protein phrog_3678 unknown function unknown function 1 1 525
AVR56338.1 MH045560_p9 hypothetical protein phrog_4055 unknown function unknown function 1 6099 6521
AVR56368.1 MH045560_p39 DNA polymerase I phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism -1 27065 28930
AVR56374.1 MH045560_p46 hypothetical protein phrog_4086 unknown function unknown function -1 33081 33806
AVR56334.1 MH045560_p5 scaffolding protein phrog_4080 scaffolding protein head and packaging 1 4108 4668
AVR56385.1 MH045560_p57 hypothetical protein phrog_4626 unknown function unknown function -1 38370 38675
AVR56372.1 MH045560_p44 hypothetical protein phrog_4570 unknown function unknown function -1 32000 32278
AVR56343.1 MH045560_p14 major tail protein phrog_2491 major tail protein tail 1 7849 8349
AVR56386.1 MH045560_p58 hypothetical protein phrog_4304 unknown function unknown function -1 38672 38863
AVR56390.1 MH045560_p62 hypothetical protein phrog_4674 unknown function unknown function -1 40424 40657
AVR56371.1 MH045560_p43 hypothetical protein phrog_4283 unknown function unknown function -1 31704 32000
AVR56366.1 MH045560_p37 AAA-ATPase domain protein phrog_124 Sak4-like ssDNA annealing protein DNA, RNA and nucleotide metabolism -1 25238 25906
AVR56389.1 MH045560_p61 hypothetical protein phrog_4362 unknown function unknown function -1 40068 40427
AVR56335.1 MH045560_p6 major capsid protein phrog_10 major head protein head and packaging 1 4708 5634
AVR56354.1 MH045560_p25 membrane protein phrog_4153 membrane protein moron, auxiliary metabolic gene and host takeover 1 19096 19485
AVR56333.1 MH045560_p4 capsid maturation protease phrog_1657 head morphogenesis head and packaging 1 3356 4024
AVR56363.1 MH045560_p34 DNA recombinase phrog_3123 unknown function unknown function -1 22423 24093
AVR56350.1 MH045560_p21 hypothetical protein phrog_4065 unknown function unknown function 1 15006 15602
AVR56369.1 MH045560_p41 DNA helicase phrog_62 DNA helicase DNA, RNA and nucleotide metabolism -1 29726 31114
AVR56356.1 MH045560_p27 hypothetical protein phrog_7870 unknown function unknown function 1 19891 20301
AVR56379.1 MH045560_p51 thymidylate synthase phrog_160 thymidylate synthase DNA, RNA and nucleotide metabolism -1 35895 36662
AVR56376.1 MH045560_p48 hypothetical protein phrog_4519 glycosyltransferase moron, auxiliary metabolic gene and host takeover -1 34381 35313
AVR56384.1 MH045560_p56 hypothetical protein phrog_4816 unknown function unknown function -1 38137 38331
AVR56359.1 MH045560_p30 hypothetical protein phrog_5430 unknown function unknown function -1 20795 20953
AVR56367.1 MH045560_p38 exonuclease phrog_1218 exonuclease DNA, RNA and nucleotide metabolism -1 25903 27078
AVR56392.1 MH045560_p40 hypothetical protein phrog_4077 unknown function unknown function -1 29130 29555
AVR56332.1 MH045560_p3 portal protein phrog_4142 portal protein head and packaging 1 1953 3350
AVR56361.1 MH045560_p32 hypothetical protein phrog_8629 unknown function unknown function -1 21836 22174
AVR56336.1 MH045560_p7 hypothetical protein phrog_5501 unknown function unknown function 1 5631 5873
AVR56388.1 MH045560_p60 hypothetical protein phrog_4158 unknown function unknown function -1 39685 40071
AVR56352.1 MH045560_p23 minor tail protein phrog_3432 minor tail protein tail 1 16087 18225
AVR56370.1 MH045560_p42 phosphoesterase phrog_755 RNA ligase DNA, RNA and nucleotide metabolism -1 31114 31707
AVR56347.1 MH045560_p18 minor tail protein phrog_33 distal tail protein Dit tail 1 11625 12398
AVR56375.1 MH045560_p47 hypothetical protein phrog_4121 thymidylate kinase other -1 33784 34365
AVR56383.1 MH045560_p55 hypothetical protein phrog_3939 unknown function unknown function -1 37743 38045
AVR56355.1 MH045560_p26 holin phrog_1299 holin lysis 1 19490 19831
AVR56353.1 MH045560_p24 lysin A phrog_2649 endolysin lysis 1 18255 19061
AVR56339.1 MH045560_p10 hypothetical protein phrog_4111 unknown function unknown function 1 6487 6903
AVR56349.1 MH045560_p20 hypothetical protein phrog_3473 unknown function unknown function 1 14821 15009
AVR56391.1 MH045560_p63 hypothetical protein phrog_4232 unknown function unknown function 1 41033 41662
AVR56377.1 MH045560_p49 hypothetical protein phrog_5300 unknown function unknown function -1 35306 35539
AVR56380.1 MH045560_p52 hypothetical protein phrog_4607 unknown function unknown function -1 36782 37015
AVR56357.1 MH045560_p28 hypothetical protein phrog_4288 unknown function unknown function -1 20369 20557
AVR56360.1 MH045560_p31 hypothetical protein phrog_4265 unknown function unknown function -1 20950 21792
AVR56362.1 MH045560_p33 hypothetical protein phrog_4669 unknown function unknown function -1 22184 22426
AVR56378.1 MH045560_p50 hypothetical protein phrog_4198 unknown function unknown function -1 35602 35898
AVR56337.1 MH045560_p8 hypothetical protein phrog_8662 unknown function unknown function 1 5945 6079
AVR56382.1 MH045560_p54 hypothetical protein phrog_4068 unknown function unknown function -1 37404 37670
AVR56341.1 MH045560_p12 hypothetical protein phrog_4076 unknown function unknown function 1 7244 7603
AVR56340.1 MH045560_p11 hypothetical protein phrog_5 tail completion or Neck1 protein connector 1 6900 7241
AVR56345.1 MH045560_p16 tail assembly chaperone phrog_4537 tail assembly chaperone tail 1 8962 9333
AVR56342.1 MH045560_p13 hypothetical protein phrog_4058 unknown function unknown function 1 7600 7836
AVR56373.1 MH045560_p45 nucleotide pyrophosphohydrolase phrog_4159 nucleotide pyrophosphohydrolase other -1 32278 33084
AVR56365.1 MH045560_p36 hypothetical protein phrog_3724 unknown function unknown function -1 24366 25205
AVR56348.1 MH045560_p19 minor tail protein phrog_3475 minor tail protein tail 1 12398 14824
AVR56331.1 MH045560_p2 terminase phrog_38 terminase large subunit head and packaging 1 522 1922
AVR56358.1 MH045560_p29 hypothetical protein phrog_4552 unknown function unknown function -1 20628 20798
AVR56381.1 MH045560_p53 hypothetical protein phrog_4634 unknown function unknown function -1 37077 37310
AVR56346.1 MH045560_p17 tape measure protein phrog_58 tail length tape measure protein tail 1 9358 11628
AVR56364.1 MH045560_p35 nuclease phrog_93 endonuclease DNA, RNA and nucleotide metabolism -1 24069 24362