| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
MH045560 |
Definition |
Microbacterium phage Nagem, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Ilzatvirus; unclassified Ilzatvirus. |
DB of origin |
NUCCORE |
Length |
41846 |
Host Name |
Microbacterium foliorum |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
63 |
%GC |
63.48 |
Number of singletons |
0 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| AVR56387.1 | MH045560_p59 | hypothetical protein | phrog_421 | unknown function | unknown function | -1 | 38860 | 39591 |
| AVR56344.1 | MH045560_p15 | tail assembly chaperone | phrog_4129 | tail assembly chaperone | tail | 1 | 8378 | 8947 |
| AVR56351.1 | MH045560_p22 | hypothetical protein | phrog_4108 | unknown function | unknown function | 1 | 15602 | 16090 |
| AVR56330.1 | MH045560_p1 | hypothetical protein | phrog_3678 | unknown function | unknown function | 1 | 1 | 525 |
| AVR56338.1 | MH045560_p9 | hypothetical protein | phrog_4055 | unknown function | unknown function | 1 | 6099 | 6521 |
| AVR56368.1 | MH045560_p39 | DNA polymerase I | phrog_17 | DNA polymerase | DNA, RNA and nucleotide metabolism | -1 | 27065 | 28930 |
| AVR56374.1 | MH045560_p46 | hypothetical protein | phrog_4086 | unknown function | unknown function | -1 | 33081 | 33806 |
| AVR56334.1 | MH045560_p5 | scaffolding protein | phrog_4080 | scaffolding protein | head and packaging | 1 | 4108 | 4668 |
| AVR56385.1 | MH045560_p57 | hypothetical protein | phrog_4626 | unknown function | unknown function | -1 | 38370 | 38675 |
| AVR56372.1 | MH045560_p44 | hypothetical protein | phrog_4570 | unknown function | unknown function | -1 | 32000 | 32278 |
| AVR56343.1 | MH045560_p14 | major tail protein | phrog_2491 | major tail protein | tail | 1 | 7849 | 8349 |
| AVR56386.1 | MH045560_p58 | hypothetical protein | phrog_4304 | unknown function | unknown function | -1 | 38672 | 38863 |
| AVR56390.1 | MH045560_p62 | hypothetical protein | phrog_4674 | unknown function | unknown function | -1 | 40424 | 40657 |
| AVR56371.1 | MH045560_p43 | hypothetical protein | phrog_4283 | unknown function | unknown function | -1 | 31704 | 32000 |
| AVR56366.1 | MH045560_p37 | AAA-ATPase domain protein | phrog_124 | Sak4-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | -1 | 25238 | 25906 |
| AVR56389.1 | MH045560_p61 | hypothetical protein | phrog_4362 | unknown function | unknown function | -1 | 40068 | 40427 |
| AVR56335.1 | MH045560_p6 | major capsid protein | phrog_10 | major head protein | head and packaging | 1 | 4708 | 5634 |
| AVR56354.1 | MH045560_p25 | membrane protein | phrog_4153 | membrane protein | moron, auxiliary metabolic gene and host takeover | 1 | 19096 | 19485 |
| AVR56333.1 | MH045560_p4 | capsid maturation protease | phrog_1657 | head morphogenesis | head and packaging | 1 | 3356 | 4024 |
| AVR56363.1 | MH045560_p34 | DNA recombinase | phrog_3123 | unknown function | unknown function | -1 | 22423 | 24093 |
| AVR56350.1 | MH045560_p21 | hypothetical protein | phrog_4065 | unknown function | unknown function | 1 | 15006 | 15602 |
| AVR56369.1 | MH045560_p41 | DNA helicase | phrog_62 | DNA helicase | DNA, RNA and nucleotide metabolism | -1 | 29726 | 31114 |
| AVR56356.1 | MH045560_p27 | hypothetical protein | phrog_7870 | unknown function | unknown function | 1 | 19891 | 20301 |
| AVR56379.1 | MH045560_p51 | thymidylate synthase | phrog_160 | thymidylate synthase | DNA, RNA and nucleotide metabolism | -1 | 35895 | 36662 |
| AVR56376.1 | MH045560_p48 | hypothetical protein | phrog_4519 | glycosyltransferase | moron, auxiliary metabolic gene and host takeover | -1 | 34381 | 35313 |
| AVR56384.1 | MH045560_p56 | hypothetical protein | phrog_4816 | unknown function | unknown function | -1 | 38137 | 38331 |
| AVR56359.1 | MH045560_p30 | hypothetical protein | phrog_5430 | unknown function | unknown function | -1 | 20795 | 20953 |
| AVR56367.1 | MH045560_p38 | exonuclease | phrog_1218 | exonuclease | DNA, RNA and nucleotide metabolism | -1 | 25903 | 27078 |
| AVR56392.1 | MH045560_p40 | hypothetical protein | phrog_4077 | unknown function | unknown function | -1 | 29130 | 29555 |
| AVR56332.1 | MH045560_p3 | portal protein | phrog_4142 | portal protein | head and packaging | 1 | 1953 | 3350 |
| AVR56361.1 | MH045560_p32 | hypothetical protein | phrog_8629 | unknown function | unknown function | -1 | 21836 | 22174 |
| AVR56336.1 | MH045560_p7 | hypothetical protein | phrog_5501 | unknown function | unknown function | 1 | 5631 | 5873 |
| AVR56388.1 | MH045560_p60 | hypothetical protein | phrog_4158 | unknown function | unknown function | -1 | 39685 | 40071 |
| AVR56352.1 | MH045560_p23 | minor tail protein | phrog_3432 | minor tail protein | tail | 1 | 16087 | 18225 |
| AVR56370.1 | MH045560_p42 | phosphoesterase | phrog_755 | RNA ligase | DNA, RNA and nucleotide metabolism | -1 | 31114 | 31707 |
| AVR56347.1 | MH045560_p18 | minor tail protein | phrog_33 | distal tail protein Dit | tail | 1 | 11625 | 12398 |
| AVR56375.1 | MH045560_p47 | hypothetical protein | phrog_4121 | thymidylate kinase | other | -1 | 33784 | 34365 |
| AVR56383.1 | MH045560_p55 | hypothetical protein | phrog_3939 | unknown function | unknown function | -1 | 37743 | 38045 |
| AVR56355.1 | MH045560_p26 | holin | phrog_1299 | holin | lysis | 1 | 19490 | 19831 |
| AVR56353.1 | MH045560_p24 | lysin A | phrog_2649 | endolysin | lysis | 1 | 18255 | 19061 |
| AVR56339.1 | MH045560_p10 | hypothetical protein | phrog_4111 | unknown function | unknown function | 1 | 6487 | 6903 |
| AVR56349.1 | MH045560_p20 | hypothetical protein | phrog_3473 | unknown function | unknown function | 1 | 14821 | 15009 |
| AVR56391.1 | MH045560_p63 | hypothetical protein | phrog_4232 | unknown function | unknown function | 1 | 41033 | 41662 |
| AVR56377.1 | MH045560_p49 | hypothetical protein | phrog_5300 | unknown function | unknown function | -1 | 35306 | 35539 |
| AVR56380.1 | MH045560_p52 | hypothetical protein | phrog_4607 | unknown function | unknown function | -1 | 36782 | 37015 |
| AVR56357.1 | MH045560_p28 | hypothetical protein | phrog_4288 | unknown function | unknown function | -1 | 20369 | 20557 |
| AVR56360.1 | MH045560_p31 | hypothetical protein | phrog_4265 | unknown function | unknown function | -1 | 20950 | 21792 |
| AVR56362.1 | MH045560_p33 | hypothetical protein | phrog_4669 | unknown function | unknown function | -1 | 22184 | 22426 |
| AVR56378.1 | MH045560_p50 | hypothetical protein | phrog_4198 | unknown function | unknown function | -1 | 35602 | 35898 |
| AVR56337.1 | MH045560_p8 | hypothetical protein | phrog_8662 | unknown function | unknown function | 1 | 5945 | 6079 |
| AVR56382.1 | MH045560_p54 | hypothetical protein | phrog_4068 | unknown function | unknown function | -1 | 37404 | 37670 |
| AVR56341.1 | MH045560_p12 | hypothetical protein | phrog_4076 | unknown function | unknown function | 1 | 7244 | 7603 |
| AVR56340.1 | MH045560_p11 | hypothetical protein | phrog_5 | tail completion or Neck1 protein | connector | 1 | 6900 | 7241 |
| AVR56345.1 | MH045560_p16 | tail assembly chaperone | phrog_4537 | tail assembly chaperone | tail | 1 | 8962 | 9333 |
| AVR56342.1 | MH045560_p13 | hypothetical protein | phrog_4058 | unknown function | unknown function | 1 | 7600 | 7836 |
| AVR56373.1 | MH045560_p45 | nucleotide pyrophosphohydrolase | phrog_4159 | nucleotide pyrophosphohydrolase | other | -1 | 32278 | 33084 |
| AVR56365.1 | MH045560_p36 | hypothetical protein | phrog_3724 | unknown function | unknown function | -1 | 24366 | 25205 |
| AVR56348.1 | MH045560_p19 | minor tail protein | phrog_3475 | minor tail protein | tail | 1 | 12398 | 14824 |
| AVR56331.1 | MH045560_p2 | terminase | phrog_38 | terminase large subunit | head and packaging | 1 | 522 | 1922 |
| AVR56358.1 | MH045560_p29 | hypothetical protein | phrog_4552 | unknown function | unknown function | -1 | 20628 | 20798 |
| AVR56381.1 | MH045560_p53 | hypothetical protein | phrog_4634 | unknown function | unknown function | -1 | 37077 | 37310 |
| AVR56346.1 | MH045560_p17 | tape measure protein | phrog_58 | tail length tape measure protein | tail | 1 | 9358 | 11628 |
| AVR56364.1 | MH045560_p35 | nuclease | phrog_93 | endonuclease | DNA, RNA and nucleotide metabolism | -1 | 24069 | 24362 |