| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
MH045561 |
Definition |
Microbacterium phage PaoPu, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae. |
DB of origin |
NUCCORE |
Length |
17362 |
Host Name |
Microbacterium foliorum |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
25 |
%GC |
68.52 |
Number of singletons |
0 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| AVR56403.1 | MH045561_p10 | tail assembly chaperone | phrog_15555 | tail assembly chaperone | tail | 1 | 6986 | 7422 |
| AVR56412.1 | MH045561_p20 | DNA bridging protein | phrog_6509 | Lsr2-like DNA bridging protein | DNA, RNA and nucleotide metabolism | -1 | 14769 | 14981 |
| AVR56400.1 | MH045561_p8 | major tail protein | phrog_4574 | major tail protein | tail | 1 | 6142 | 6576 |
| AVR56393.1 | MH045561_p1 | hypothetical protein | phrog_24516 | unknown function | unknown function | 1 | 41 | 379 |
| AVR56411.1 | MH045561_p19 | membrane protein | phrog_6116 | holin | lysis | 1 | 14476 | 14700 |
| AVR56417.1 | MH045561_p25 | HNH endonuclease | phrog_5718 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 16989 | 17288 |
| AVR56410.1 | MH045561_p18 | membrane protein | phrog_26963 | membrane protein | moron, auxiliary metabolic gene and host takeover | 1 | 14246 | 14479 |
| AVR56416.1 | MH045561_p24 | Mer-like helix-turn-helix DNA binding protein | phrog_66 | excisionase and transcriptional regulator | integration and excision | 1 | 16774 | 16992 |
| AVR56406.1 | MH045561_p14 | minor tail protein | phrog_23968 | minor tail protein | tail | 1 | 10601 | 12670 |
| AVR56395.1 | MH045561_p3 | terminase | phrog_9 | terminase large subunit | head and packaging | 1 | 1074 | 2534 |
| AVR56402.1 | MH045561_p11 | tail assembly chaperone | phrog_15555 | tail assembly chaperone | tail | 1 | 6986 | 7306 |
| AVR56394.1 | MH045561_p2 | hypothetical protein | phrog_29062 | unknown function | unknown function | 1 | 376 | 1071 |
| AVR56415.1 | MH045561_p23 | hypothetical protein | phrog_38629 | unknown function | unknown function | 1 | 16508 | 16690 |
| AVR56413.1 | MH045561_p21 | DNA binding protein | phrog_22141 | DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 14984 | 15484 |
| AVR56405.1 | MH045561_p13 | minor tail protein | phrog_30740 | minor tail protein | tail | 1 | 9642 | 10601 |
| AVR56408.1 | MH045561_p16 | hypothetical protein | phrog_28553 | unknown function | unknown function | 1 | 13233 | 13544 |
| AVR56399.1 | MH045561_p7 | minor tail protein | phrog_22278 | minor tail protein | tail | 1 | 5723 | 6103 |
| AVR56409.1 | MH045561_p17 | lysin A | phrog_14988 | peptidase | other | 1 | 13563 | 14249 |
| AVR56398.1 | MH045561_p6 | head-to-tail connector complex protein | phrog_5938 | head-tail connector protein | connector | 1 | 5373 | 5726 |
| AVR56414.1 | MH045561_p22 | helix-turn-helix DNA binding protein | phrog_3 | transcriptional repressor | transcription regulation | -1 | 15564 | 15794 |
| AVR56396.1 | MH045561_p4 | portal protein | phrog_12 | portal protein | head and packaging | 1 | 2659 | 3786 |
| AVR56401.1 | MH045561_p9 | hypothetical protein | phrog_5 | tail completion or Neck1 protein | connector | 1 | 6589 | 6972 |
| AVR56404.1 | MH045561_p12 | tape measure protein | phrog_971 | endolysin | lysis | 1 | 7540 | 9645 |
| AVR56397.1 | MH045561_p5 | capsid & capsid maturation protease | phrog_2263 | major head protein | head and packaging | 1 | 3783 | 5369 |
| AVR56407.1 | MH045561_p15 | minor tail protein | phrog_8763 | tail protein | tail | 1 | 12672 | 13220 |