Genomic map of Microbacterium phage PaoPu (MH045561)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
MH045561
Definition
Microbacterium phage PaoPu, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
DB of origin
NUCCORE
Length
17362
Host Name
Microbacterium foliorum
Host domain
Bacteria
Is prophage?
undef
Number of proteins
25
%GC
68.52
Number of singletons
0
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
AVR56403.1 MH045561_p10 tail assembly chaperone phrog_15555 tail assembly chaperone tail 1 6986 7422
AVR56412.1 MH045561_p20 DNA bridging protein phrog_6509 Lsr2-like DNA bridging protein DNA, RNA and nucleotide metabolism -1 14769 14981
AVR56400.1 MH045561_p8 major tail protein phrog_4574 major tail protein tail 1 6142 6576
AVR56393.1 MH045561_p1 hypothetical protein phrog_24516 unknown function unknown function 1 41 379
AVR56411.1 MH045561_p19 membrane protein phrog_6116 holin lysis 1 14476 14700
AVR56417.1 MH045561_p25 HNH endonuclease phrog_5718 HNH endonuclease DNA, RNA and nucleotide metabolism 1 16989 17288
AVR56410.1 MH045561_p18 membrane protein phrog_26963 membrane protein moron, auxiliary metabolic gene and host takeover 1 14246 14479
AVR56416.1 MH045561_p24 Mer-like helix-turn-helix DNA binding protein phrog_66 excisionase and transcriptional regulator integration and excision 1 16774 16992
AVR56406.1 MH045561_p14 minor tail protein phrog_23968 minor tail protein tail 1 10601 12670
AVR56395.1 MH045561_p3 terminase phrog_9 terminase large subunit head and packaging 1 1074 2534
AVR56402.1 MH045561_p11 tail assembly chaperone phrog_15555 tail assembly chaperone tail 1 6986 7306
AVR56394.1 MH045561_p2 hypothetical protein phrog_29062 unknown function unknown function 1 376 1071
AVR56415.1 MH045561_p23 hypothetical protein phrog_38629 unknown function unknown function 1 16508 16690
AVR56413.1 MH045561_p21 DNA binding protein phrog_22141 DNA binding protein DNA, RNA and nucleotide metabolism -1 14984 15484
AVR56405.1 MH045561_p13 minor tail protein phrog_30740 minor tail protein tail 1 9642 10601
AVR56408.1 MH045561_p16 hypothetical protein phrog_28553 unknown function unknown function 1 13233 13544
AVR56399.1 MH045561_p7 minor tail protein phrog_22278 minor tail protein tail 1 5723 6103
AVR56409.1 MH045561_p17 lysin A phrog_14988 peptidase other 1 13563 14249
AVR56398.1 MH045561_p6 head-to-tail connector complex protein phrog_5938 head-tail connector protein connector 1 5373 5726
AVR56414.1 MH045561_p22 helix-turn-helix DNA binding protein phrog_3 transcriptional repressor transcription regulation -1 15564 15794
AVR56396.1 MH045561_p4 portal protein phrog_12 portal protein head and packaging 1 2659 3786
AVR56401.1 MH045561_p9 hypothetical protein phrog_5 tail completion or Neck1 protein connector 1 6589 6972
AVR56404.1 MH045561_p12 tape measure protein phrog_971 endolysin lysis 1 7540 9645
AVR56397.1 MH045561_p5 capsid & capsid maturation protease phrog_2263 major head protein head and packaging 1 3783 5369
AVR56407.1 MH045561_p15 minor tail protein phrog_8763 tail protein tail 1 12672 13220