Genomic map of Microbacterium phage Didgeridoo (MH045566)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
MH045566
Definition
Microbacterium phage Didgeridoo, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Dismasvirus; unclassified Dismasvirus.
DB of origin
NUCCORE
Length
42655
Host Name
Microbacterium foliorum
Host domain
Bacteria
Is prophage?
undef
Number of proteins
75
%GC
66.06
Number of singletons
13
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
AVR56690.1 MH045566_p24 membrane protein phrog_35459 unknown function unknown function 1 18917 19408
AVR56722.1 MH045566_p57 hypothetical protein phrog_19326 unknown function unknown function 1 36261 36419
AVR56695.1 MH045566_p29 hypothetical protein phrog_18396 unknown function unknown function 1 20811 21524
AVR56679.1 MH045566_p11 hypothetical protein phrog_387 neck protein connector 1 7870 8133
AVR56727.1 MH045566_p62 hypothetical protein singleton unknown function unknown function 1 38089 38403
AVR56715.1 MH045566_p50 hypothetical protein singleton unknown function unknown function -1 33489 33719
AVR56735.1 MH045566_p70 hypothetical protein phrog_18789 unknown function unknown function 1 40896 41078
AVR56718.1 MH045566_p53 hypothetical protein phrog_1106 unknown function unknown function 1 34464 34898
AVR56716.1 MH045566_p51 hypothetical protein phrog_34373 unknown function unknown function 1 33830 33991
AVR56680.1 MH045566_p12 hypothetical protein phrog_123 tail terminator connector 1 8135 8533
AVR56708.1 MH045566_p43 hypothetical protein phrog_25293 unknown function unknown function 1 27434 27604
AVR56721.1 MH045566_p56 hypothetical protein phrog_19816 unknown function unknown function 1 35947 36264
AVR56734.1 MH045566_p69 hypothetical protein phrog_21226 unknown function unknown function 1 40684 40896
AVR56713.1 MH045566_p48 helix-turn-helix DNA binding domain protein phrog_351 RNA polymerase sigma factor transcription regulation 1 32578 33297
AVR56726.1 MH045566_p61 thymidylate synthase phrog_316 dihydrofolate reductase DNA, RNA and nucleotide metabolism 1 37517 38092
AVR56710.1 MH045566_p45 DNA polymerase I phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism 1 30205 32079
AVR56683.1 MH045566_p17 tape measure protein phrog_971 endolysin lysis 1 10509 13271
AVR56705.1 MH045566_p40 hypothetical protein phrog_21187 unknown function unknown function 1 26449 26742
AVR56701.1 MH045566_p35 hypothetical protein phrog_9220 unknown function unknown function 1 24478 25230
AVR56728.1 MH045566_p63 hypothetical protein singleton unknown function unknown function 1 38403 38744
AVR56669.1 MH045566_p1 hypothetical protein singleton unknown function unknown function 1 218 400
AVR56741.1 MH045566_p16 hypothetical protein singleton unknown function unknown function 1 10191 10307
AVR56723.1 MH045566_p58 hypothetical protein phrog_19143 unknown function unknown function 1 36475 36960
AVR56724.1 MH045566_p59 hypothetical protein singleton unknown function unknown function 1 37026 37226
AVR56720.1 MH045566_p55 HNH endonuclease phrog_2214 HNH endonuclease DNA, RNA and nucleotide metabolism 1 35393 35785
AVR56675.1 MH045566_p7 major capsid protein phrog_10 major head protein head and packaging 1 5391 6572
AVR56732.1 MH045566_p67 hypothetical protein phrog_20930 unknown function unknown function 1 40207 40407
AVR56707.1 MH045566_p42 hypothetical protein singleton unknown function unknown function 1 27154 27444
AVR56684.1 MH045566_p18 minor tail protein phrog_33 distal tail protein Dit tail 1 13268 14122
AVR56671.1 MH045566_p3 terminase small subunit phrog_19969 terminase small subunit head and packaging 1 618 941
AVR56733.1 MH045566_p68 hypothetical protein phrog_24284 unknown function unknown function 1 40551 40691
AVR56731.1 MH045566_p66 hypothetical protein phrog_1342 unknown function unknown function 1 39884 40207
AVR56737.1 MH045566_p72 hypothetical protein singleton unknown function unknown function 1 41319 41639
AVR56717.1 MH045566_p52 hypothetical protein phrog_21912 DNA binding protein DNA, RNA and nucleotide metabolism 1 33991 34467
AVR56736.1 MH045566_p71 hypothetical protein phrog_18769 unknown function unknown function 1 41092 41319
AVR56739.1 MH045566_p74 HNH endonuclease phrog_338 HNH endonuclease DNA, RNA and nucleotide metabolism 1 42192 42467
AVR56699.1 MH045566_p33 dUTP pyrophosphatase phrog_18650 dUTPase DNA, RNA and nucleotide metabolism 1 23183 23950
AVR56698.1 MH045566_p32 hypothetical protein phrog_21768 unknown function unknown function 1 22806 23186
AVR56729.1 MH045566_p64 thymidylate synthase phrog_160 thymidylate synthase DNA, RNA and nucleotide metabolism 1 38737 39648
AVR56702.1 MH045566_p37 hypothetical protein phrog_24743 unknown function unknown function -1 25478 25777
AVR56670.1 MH045566_p2 hypothetical protein phrog_21191 unknown function unknown function 1 403 618
AVR56682.1 MH045566_p15 tail assembly chaperone phrog_8595 tail assembly chaperone tail 1 9466 9774
AVR56711.1 MH045566_p46 hypothetical protein phrog_6832 unknown function unknown function 1 32079 32279
AVR56673.1 MH045566_p5 portal protein phrog_2662 portal protein head and packaging 1 2584 4605
AVR56676.1 MH045566_p8 hypothetical protein phrog_20072 unknown function unknown function 1 6638 6958
AVR56688.1 MH045566_p22 minor tail protein phrog_6977 minor tail protein tail 1 17353 18159
AVR56691.1 MH045566_p25 hypothetical protein phrog_37645 unknown function unknown function 1 19419 19760
AVR56714.1 MH045566_p49 hypothetical protein phrog_21264 unknown function unknown function -1 33294 33476
AVR56712.1 MH045566_p47 hypothetical protein phrog_21236 unknown function unknown function 1 32276 32578
AVR56694.1 MH045566_p28 hypothetical protein phrog_26845 unknown function unknown function 1 20192 20800
AVR56674.1 MH045566_p6 capsid maturation protease phrog_80 head maturation protease head and packaging 1 4605 5357
AVR56697.1 MH045566_p31 HNH endonuclease phrog_2914 endonuclease VII DNA, RNA and nucleotide metabolism 1 22465 22809
AVR56685.1 MH045566_p19 minor tail protein phrog_538 minor tail protein tail 1 14122 16092
AVR56742.1 MH045566_p14 tail assembly chaperone phrog_1326 tail assembly chaperone tail 1 9466 10157
AVR56738.1 MH045566_p73 hypothetical protein phrog_20067 unknown function unknown function 1 41636 41986
AVR56686.1 MH045566_p20 hypothetical protein singleton unknown function unknown function 1 16085 16255
AVR56678.1 MH045566_p10 hypothetical protein phrog_501 head closure Hc1 connector 1 7544 7873
AVR56672.1 MH045566_p4 terminase large subunit phrog_9 terminase large subunit head and packaging 1 944 2572
AVR56730.1 MH045566_p65 hypothetical protein singleton unknown function unknown function 1 39660 39884
AVR56696.1 MH045566_p30 exonuclease phrog_298 exonuclease DNA, RNA and nucleotide metabolism 1 21590 22465
AVR56704.1 MH045566_p39 endonuclease phrog_244 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 26093 26419
AVR56681.1 MH045566_p13 major tail protein phrog_117 major tail protein tail 1 8549 9343
AVR56689.1 MH045566_p23 lysin A singleton unknown function unknown function 1 18171 18920
AVR56687.1 MH045566_p21 minor tail protein phrog_6779 tail protein tail 1 16255 17343
AVR56700.1 MH045566_p34 hypothetical protein phrog_761 thymidylate kinase other 1 23947 24462
AVR56725.1 MH045566_p60 hypothetical protein phrog_19424 unknown function unknown function 1 37219 37527
AVR56693.1 MH045566_p27 hypothetical protein singleton unknown function unknown function -1 20025 20141
AVR56703.1 MH045566_p38 thioredoxin phrog_22 thioredoxin domain DNA, RNA and nucleotide metabolism 1 25851 26093
AVR56677.1 MH045566_p9 head-to-tail connector complex protein phrog_442 head-tail adaptor connector 1 6993 7544
AVR56743.1 MH045566_p36 hypothetical protein phrog_35452 unknown function unknown function -1 25389 25481
AVR56692.1 MH045566_p26 membrane protein phrog_17495 membrane protein moron, auxiliary metabolic gene and host takeover 1 19764 19994
AVR56719.1 MH045566_p54 hypothetical protein phrog_26333 unknown function unknown function 1 34903 35334
AVR56740.1 MH045566_p75 hypothetical protein singleton unknown function unknown function 1 42467 42595
AVR56706.1 MH045566_p41 hypothetical protein phrog_32055 unknown function unknown function 1 26825 27154
AVR56709.1 MH045566_p44 DNA primase phrog_6088 DNA primase DNA, RNA and nucleotide metabolism 1 27725 30208