| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
MH045566 |
Definition |
Microbacterium phage Didgeridoo, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Dismasvirus; unclassified Dismasvirus. |
DB of origin |
NUCCORE |
Length |
42655 |
Host Name |
Microbacterium foliorum |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
75 |
%GC |
66.06 |
Number of singletons |
13 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| AVR56690.1 | MH045566_p24 | membrane protein | phrog_35459 | unknown function | unknown function | 1 | 18917 | 19408 |
| AVR56722.1 | MH045566_p57 | hypothetical protein | phrog_19326 | unknown function | unknown function | 1 | 36261 | 36419 |
| AVR56695.1 | MH045566_p29 | hypothetical protein | phrog_18396 | unknown function | unknown function | 1 | 20811 | 21524 |
| AVR56679.1 | MH045566_p11 | hypothetical protein | phrog_387 | neck protein | connector | 1 | 7870 | 8133 |
| AVR56727.1 | MH045566_p62 | hypothetical protein | singleton | unknown function | unknown function | 1 | 38089 | 38403 |
| AVR56715.1 | MH045566_p50 | hypothetical protein | singleton | unknown function | unknown function | -1 | 33489 | 33719 |
| AVR56735.1 | MH045566_p70 | hypothetical protein | phrog_18789 | unknown function | unknown function | 1 | 40896 | 41078 |
| AVR56718.1 | MH045566_p53 | hypothetical protein | phrog_1106 | unknown function | unknown function | 1 | 34464 | 34898 |
| AVR56716.1 | MH045566_p51 | hypothetical protein | phrog_34373 | unknown function | unknown function | 1 | 33830 | 33991 |
| AVR56680.1 | MH045566_p12 | hypothetical protein | phrog_123 | tail terminator | connector | 1 | 8135 | 8533 |
| AVR56708.1 | MH045566_p43 | hypothetical protein | phrog_25293 | unknown function | unknown function | 1 | 27434 | 27604 |
| AVR56721.1 | MH045566_p56 | hypothetical protein | phrog_19816 | unknown function | unknown function | 1 | 35947 | 36264 |
| AVR56734.1 | MH045566_p69 | hypothetical protein | phrog_21226 | unknown function | unknown function | 1 | 40684 | 40896 |
| AVR56713.1 | MH045566_p48 | helix-turn-helix DNA binding domain protein | phrog_351 | RNA polymerase sigma factor | transcription regulation | 1 | 32578 | 33297 |
| AVR56726.1 | MH045566_p61 | thymidylate synthase | phrog_316 | dihydrofolate reductase | DNA, RNA and nucleotide metabolism | 1 | 37517 | 38092 |
| AVR56710.1 | MH045566_p45 | DNA polymerase I | phrog_17 | DNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 30205 | 32079 |
| AVR56683.1 | MH045566_p17 | tape measure protein | phrog_971 | endolysin | lysis | 1 | 10509 | 13271 |
| AVR56705.1 | MH045566_p40 | hypothetical protein | phrog_21187 | unknown function | unknown function | 1 | 26449 | 26742 |
| AVR56701.1 | MH045566_p35 | hypothetical protein | phrog_9220 | unknown function | unknown function | 1 | 24478 | 25230 |
| AVR56728.1 | MH045566_p63 | hypothetical protein | singleton | unknown function | unknown function | 1 | 38403 | 38744 |
| AVR56669.1 | MH045566_p1 | hypothetical protein | singleton | unknown function | unknown function | 1 | 218 | 400 |
| AVR56741.1 | MH045566_p16 | hypothetical protein | singleton | unknown function | unknown function | 1 | 10191 | 10307 |
| AVR56723.1 | MH045566_p58 | hypothetical protein | phrog_19143 | unknown function | unknown function | 1 | 36475 | 36960 |
| AVR56724.1 | MH045566_p59 | hypothetical protein | singleton | unknown function | unknown function | 1 | 37026 | 37226 |
| AVR56720.1 | MH045566_p55 | HNH endonuclease | phrog_2214 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 35393 | 35785 |
| AVR56675.1 | MH045566_p7 | major capsid protein | phrog_10 | major head protein | head and packaging | 1 | 5391 | 6572 |
| AVR56732.1 | MH045566_p67 | hypothetical protein | phrog_20930 | unknown function | unknown function | 1 | 40207 | 40407 |
| AVR56707.1 | MH045566_p42 | hypothetical protein | singleton | unknown function | unknown function | 1 | 27154 | 27444 |
| AVR56684.1 | MH045566_p18 | minor tail protein | phrog_33 | distal tail protein Dit | tail | 1 | 13268 | 14122 |
| AVR56671.1 | MH045566_p3 | terminase small subunit | phrog_19969 | terminase small subunit | head and packaging | 1 | 618 | 941 |
| AVR56733.1 | MH045566_p68 | hypothetical protein | phrog_24284 | unknown function | unknown function | 1 | 40551 | 40691 |
| AVR56731.1 | MH045566_p66 | hypothetical protein | phrog_1342 | unknown function | unknown function | 1 | 39884 | 40207 |
| AVR56737.1 | MH045566_p72 | hypothetical protein | singleton | unknown function | unknown function | 1 | 41319 | 41639 |
| AVR56717.1 | MH045566_p52 | hypothetical protein | phrog_21912 | DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 33991 | 34467 |
| AVR56736.1 | MH045566_p71 | hypothetical protein | phrog_18769 | unknown function | unknown function | 1 | 41092 | 41319 |
| AVR56739.1 | MH045566_p74 | HNH endonuclease | phrog_338 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 42192 | 42467 |
| AVR56699.1 | MH045566_p33 | dUTP pyrophosphatase | phrog_18650 | dUTPase | DNA, RNA and nucleotide metabolism | 1 | 23183 | 23950 |
| AVR56698.1 | MH045566_p32 | hypothetical protein | phrog_21768 | unknown function | unknown function | 1 | 22806 | 23186 |
| AVR56729.1 | MH045566_p64 | thymidylate synthase | phrog_160 | thymidylate synthase | DNA, RNA and nucleotide metabolism | 1 | 38737 | 39648 |
| AVR56702.1 | MH045566_p37 | hypothetical protein | phrog_24743 | unknown function | unknown function | -1 | 25478 | 25777 |
| AVR56670.1 | MH045566_p2 | hypothetical protein | phrog_21191 | unknown function | unknown function | 1 | 403 | 618 |
| AVR56682.1 | MH045566_p15 | tail assembly chaperone | phrog_8595 | tail assembly chaperone | tail | 1 | 9466 | 9774 |
| AVR56711.1 | MH045566_p46 | hypothetical protein | phrog_6832 | unknown function | unknown function | 1 | 32079 | 32279 |
| AVR56673.1 | MH045566_p5 | portal protein | phrog_2662 | portal protein | head and packaging | 1 | 2584 | 4605 |
| AVR56676.1 | MH045566_p8 | hypothetical protein | phrog_20072 | unknown function | unknown function | 1 | 6638 | 6958 |
| AVR56688.1 | MH045566_p22 | minor tail protein | phrog_6977 | minor tail protein | tail | 1 | 17353 | 18159 |
| AVR56691.1 | MH045566_p25 | hypothetical protein | phrog_37645 | unknown function | unknown function | 1 | 19419 | 19760 |
| AVR56714.1 | MH045566_p49 | hypothetical protein | phrog_21264 | unknown function | unknown function | -1 | 33294 | 33476 |
| AVR56712.1 | MH045566_p47 | hypothetical protein | phrog_21236 | unknown function | unknown function | 1 | 32276 | 32578 |
| AVR56694.1 | MH045566_p28 | hypothetical protein | phrog_26845 | unknown function | unknown function | 1 | 20192 | 20800 |
| AVR56674.1 | MH045566_p6 | capsid maturation protease | phrog_80 | head maturation protease | head and packaging | 1 | 4605 | 5357 |
| AVR56697.1 | MH045566_p31 | HNH endonuclease | phrog_2914 | endonuclease VII | DNA, RNA and nucleotide metabolism | 1 | 22465 | 22809 |
| AVR56685.1 | MH045566_p19 | minor tail protein | phrog_538 | minor tail protein | tail | 1 | 14122 | 16092 |
| AVR56742.1 | MH045566_p14 | tail assembly chaperone | phrog_1326 | tail assembly chaperone | tail | 1 | 9466 | 10157 |
| AVR56738.1 | MH045566_p73 | hypothetical protein | phrog_20067 | unknown function | unknown function | 1 | 41636 | 41986 |
| AVR56686.1 | MH045566_p20 | hypothetical protein | singleton | unknown function | unknown function | 1 | 16085 | 16255 |
| AVR56678.1 | MH045566_p10 | hypothetical protein | phrog_501 | head closure Hc1 | connector | 1 | 7544 | 7873 |
| AVR56672.1 | MH045566_p4 | terminase large subunit | phrog_9 | terminase large subunit | head and packaging | 1 | 944 | 2572 |
| AVR56730.1 | MH045566_p65 | hypothetical protein | singleton | unknown function | unknown function | 1 | 39660 | 39884 |
| AVR56696.1 | MH045566_p30 | exonuclease | phrog_298 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 21590 | 22465 |
| AVR56704.1 | MH045566_p39 | endonuclease | phrog_244 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 26093 | 26419 |
| AVR56681.1 | MH045566_p13 | major tail protein | phrog_117 | major tail protein | tail | 1 | 8549 | 9343 |
| AVR56689.1 | MH045566_p23 | lysin A | singleton | unknown function | unknown function | 1 | 18171 | 18920 |
| AVR56687.1 | MH045566_p21 | minor tail protein | phrog_6779 | tail protein | tail | 1 | 16255 | 17343 |
| AVR56700.1 | MH045566_p34 | hypothetical protein | phrog_761 | thymidylate kinase | other | 1 | 23947 | 24462 |
| AVR56725.1 | MH045566_p60 | hypothetical protein | phrog_19424 | unknown function | unknown function | 1 | 37219 | 37527 |
| AVR56693.1 | MH045566_p27 | hypothetical protein | singleton | unknown function | unknown function | -1 | 20025 | 20141 |
| AVR56703.1 | MH045566_p38 | thioredoxin | phrog_22 | thioredoxin domain | DNA, RNA and nucleotide metabolism | 1 | 25851 | 26093 |
| AVR56677.1 | MH045566_p9 | head-to-tail connector complex protein | phrog_442 | head-tail adaptor | connector | 1 | 6993 | 7544 |
| AVR56743.1 | MH045566_p36 | hypothetical protein | phrog_35452 | unknown function | unknown function | -1 | 25389 | 25481 |
| AVR56692.1 | MH045566_p26 | membrane protein | phrog_17495 | membrane protein | moron, auxiliary metabolic gene and host takeover | 1 | 19764 | 19994 |
| AVR56719.1 | MH045566_p54 | hypothetical protein | phrog_26333 | unknown function | unknown function | 1 | 34903 | 35334 |
| AVR56740.1 | MH045566_p75 | hypothetical protein | singleton | unknown function | unknown function | 1 | 42467 | 42595 |
| AVR56706.1 | MH045566_p41 | hypothetical protein | phrog_32055 | unknown function | unknown function | 1 | 26825 | 27154 |
| AVR56709.1 | MH045566_p44 | DNA primase | phrog_6088 | DNA primase | DNA, RNA and nucleotide metabolism | 1 | 27725 | 30208 |