| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
MH045567 |
Definition |
Microbacterium phage Elva, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Dismasvirus; unclassified Dismasvirus. |
DB of origin |
NUCCORE |
Length |
42139 |
Host Name |
Microbacterium foliorum |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
71 |
%GC |
68.16 |
Number of singletons |
9 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| AVR56789.1 | MH045567_p48 | hypothetical protein | singleton | unknown function | unknown function | -1 | 33619 | 33837 |
| AVR56801.1 | MH045567_p60 | hypothetical protein | singleton | unknown function | unknown function | 1 | 38140 | 38511 |
| AVR56774.1 | MH045567_p33 | dUTP pyrophosphatase | phrog_18650 | dUTPase | DNA, RNA and nucleotide metabolism | 1 | 23789 | 24370 |
| AVR56782.1 | MH045567_p41 | hypothetical protein | phrog_32055 | unknown function | unknown function | 1 | 27269 | 27622 |
| AVR56773.1 | MH045567_p32 | hypothetical protein | phrog_2089 | unknown function | unknown function | -1 | 23488 | 23679 |
| AVR56746.1 | MH045567_p3 | terminase small subunit | phrog_19969 | terminase small subunit | head and packaging | 1 | 688 | 1011 |
| AVR56803.1 | MH045567_p62 | hypothetical protein | phrog_1342 | unknown function | unknown function | 1 | 39454 | 39777 |
| AVR56802.1 | MH045567_p61 | thymidylate synthase | phrog_160 | thymidylate synthase | DNA, RNA and nucleotide metabolism | 1 | 38508 | 39437 |
| AVR56757.1 | MH045567_p15 | tail assembly chaperone | phrog_8595 | tail assembly chaperone | tail | 1 | 9524 | 9832 |
| AVR56756.1 | MH045567_p13 | major tail protein | phrog_117 | major tail protein | tail | 1 | 8634 | 9431 |
| AVR56796.1 | MH045567_p55 | hypothetical protein | phrog_19816 | unknown function | unknown function | 1 | 36253 | 36564 |
| AVR56763.1 | MH045567_p22 | minor tail protein | phrog_23582 | unknown function | unknown function | 1 | 17711 | 19414 |
| AVR56744.1 | MH045567_p1 | hypothetical protein | singleton | unknown function | unknown function | 1 | 70 | 258 |
| AVR56759.1 | MH045567_p18 | minor tail protein | phrog_33 | distal tail protein Dit | tail | 1 | 13053 | 13907 |
| AVR56781.1 | MH045567_p40 | hypothetical protein | phrog_21187 | unknown function | unknown function | 1 | 26895 | 27188 |
| AVR56793.1 | MH045567_p52 | hypothetical protein | phrog_26333 | unknown function | unknown function | 1 | 34735 | 35214 |
| AVR56812.1 | MH045567_p71 | hypothetical protein | singleton | unknown function | unknown function | 1 | 41950 | 42072 |
| AVR56797.1 | MH045567_p56 | hypothetical protein | phrog_19326 | unknown function | unknown function | 1 | 36561 | 36722 |
| AVR56760.1 | MH045567_p19 | minor tail protein | phrog_538 | minor tail protein | tail | 1 | 13907 | 16039 |
| AVR56768.1 | MH045567_p27 | hypothetical protein | singleton | unknown function | unknown function | 1 | 21437 | 21583 |
| AVR56794.1 | MH045567_p53 | hypothetical protein | phrog_572 | unknown function | unknown function | 1 | 35217 | 35639 |
| AVR56810.1 | MH045567_p69 | hypothetical protein | phrog_20067 | unknown function | unknown function | 1 | 40991 | 41338 |
| AVR56805.1 | MH045567_p64 | hypothetical protein | phrog_24284 | unknown function | unknown function | 1 | 40115 | 40252 |
| AVR56780.1 | MH045567_p39 | endonuclease | phrog_244 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 26539 | 26865 |
| AVR56811.1 | MH045567_p70 | HNH endonuclease | phrog_338 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 41675 | 41950 |
| AVR56808.1 | MH045567_p67 | hypothetical protein | phrog_18789 | unknown function | unknown function | 1 | 40561 | 40749 |
| AVR56765.1 | MH045567_p24 | hypothetical protein | phrog_37645 | unknown function | unknown function | 1 | 19907 | 20248 |
| AVR56790.1 | MH045567_p49 | hypothetical protein | phrog_21264 | unknown function | unknown function | -1 | 33840 | 34022 |
| AVR56749.1 | MH045567_p6 | capsid maturation protease | phrog_80 | head maturation protease | head and packaging | 1 | 4677 | 5432 |
| AVR56779.1 | MH045567_p38 | thioredoxin | phrog_22 | thioredoxin domain | DNA, RNA and nucleotide metabolism | 1 | 26309 | 26539 |
| AVR56806.1 | MH045567_p65 | hypothetical protein | singleton | unknown function | unknown function | 1 | 40249 | 40362 |
| AVR56745.1 | MH045567_p2 | hypothetical protein | phrog_21191 | unknown function | unknown function | 1 | 458 | 688 |
| AVR56791.1 | MH045567_p50 | hypothetical protein | phrog_34373 | unknown function | unknown function | 1 | 34135 | 34299 |
| AVR56799.1 | MH045567_p58 | hypothetical protein | phrog_19424 | unknown function | unknown function | 1 | 37321 | 37581 |
| AVR56807.1 | MH045567_p66 | hypothetical protein | phrog_21226 | unknown function | unknown function | 1 | 40355 | 40561 |
| AVR56752.1 | MH045567_p9 | head-to-tail connector complex protein | phrog_442 | head-tail adaptor | connector | 1 | 7080 | 7631 |
| AVR56772.1 | MH045567_p31 | hypothetical protein | phrog_21768 | unknown function | unknown function | 1 | 23046 | 23429 |
| AVR56785.1 | MH045567_p44 | DNA polymerase I | phrog_17 | DNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 30530 | 32404 |
| AVR56813.1 | MH045567_p16 | hypothetical protein | singleton | unknown function | unknown function | 1 | 10255 | 10380 |
| AVR56786.1 | MH045567_p45 | hypothetical protein | phrog_6832 | unknown function | unknown function | 1 | 32404 | 32601 |
| AVR56766.1 | MH045567_p25 | membrane protein | phrog_17495 | membrane protein | moron, auxiliary metabolic gene and host takeover | 1 | 20251 | 20505 |
| AVR56771.1 | MH045567_p30 | hypothetical protein | phrog_6910 | unknown function | unknown function | 1 | 22711 | 23049 |
| AVR56792.1 | MH045567_p51 | helix-turn-helix DNA binding domain protein | phrog_21912 | DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 34299 | 34718 |
| AVR56777.1 | MH045567_p36 | hypothetical protein | phrog_35452 | unknown function | unknown function | -1 | 25844 | 25933 |
| AVR56754.1 | MH045567_p11 | hypothetical protein | phrog_387 | neck protein | connector | 1 | 7965 | 8225 |
| AVR56748.1 | MH045567_p5 | portal protein | phrog_2662 | portal protein | head and packaging | 1 | 2650 | 4677 |
| AVR56776.1 | MH045567_p35 | hypothetical protein | phrog_9220 | unknown function | unknown function | 1 | 24888 | 25637 |
| AVR56750.1 | MH045567_p7 | major capsid protein | phrog_10 | major head protein | head and packaging | 1 | 5469 | 6656 |
| AVR56778.1 | MH045567_p37 | hypothetical protein | phrog_24743 | unknown function | unknown function | -1 | 25933 | 26235 |
| AVR56814.1 | MH045567_p14 | tail assembly chaperone | phrog_1326 | tail assembly chaperone | tail | 1 | 9524 | 10215 |
| AVR56775.1 | MH045567_p34 | thymidylate synthase | phrog_761 | thymidylate kinase | other | 1 | 24367 | 24873 |
| AVR56755.1 | MH045567_p12 | hypothetical protein | phrog_123 | tail terminator | connector | 1 | 8225 | 8620 |
| AVR56751.1 | MH045567_p8 | hypothetical protein | phrog_20072 | unknown function | unknown function | 1 | 6719 | 7045 |
| AVR56784.1 | MH045567_p43 | DNA primase | phrog_6088 | DNA primase | DNA, RNA and nucleotide metabolism | 1 | 27927 | 30533 |
| AVR56769.1 | MH045567_p28 | hypothetical protein | singleton | unknown function | unknown function | 1 | 21583 | 21732 |
| AVR56747.1 | MH045567_p4 | terminase large subunit | phrog_9 | terminase large subunit | head and packaging | 1 | 1014 | 2639 |
| AVR56795.1 | MH045567_p54 | HNH endonuclease | phrog_2214 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 35701 | 36096 |
| AVR56798.1 | MH045567_p57 | hypothetical protein | phrog_19143 | unknown function | unknown function | 1 | 36778 | 37257 |
| AVR56788.1 | MH045567_p47 | helix-turn-helix DNA binding domain protein | phrog_351 | RNA polymerase sigma factor | transcription regulation | 1 | 32903 | 33622 |
| AVR56787.1 | MH045567_p46 | hypothetical protein | phrog_21236 | unknown function | unknown function | 1 | 32598 | 32900 |
| AVR56783.1 | MH045567_p42 | hypothetical protein | singleton | unknown function | unknown function | 1 | 27622 | 27810 |
| AVR56770.1 | MH045567_p29 | exonuclease | phrog_298 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 21782 | 22714 |
| AVR56809.1 | MH045567_p68 | hypothetical protein | phrog_18769 | unknown function | unknown function | 1 | 40764 | 40991 |
| AVR56753.1 | MH045567_p10 | hypothetical protein | phrog_501 | head closure Hc1 | connector | 1 | 7631 | 7960 |
| AVR56767.1 | MH045567_p26 | hypothetical protein | phrog_18396 | unknown function | unknown function | 1 | 20763 | 21440 |
| AVR56804.1 | MH045567_p63 | hypothetical protein | phrog_20930 | unknown function | unknown function | 1 | 39777 | 39971 |
| AVR56761.1 | MH045567_p20 | minor tail protein | phrog_6779 | tail protein | tail | 1 | 16052 | 16888 |
| AVR56758.1 | MH045567_p17 | tape measure protein | phrog_971 | endolysin | lysis | 1 | 10426 | 13056 |
| AVR56800.1 | MH045567_p59 | thymidylate synthase | phrog_316 | dihydrofolate reductase | DNA, RNA and nucleotide metabolism | 1 | 37571 | 38137 |
| AVR56762.1 | MH045567_p21 | minor tail protein | phrog_6977 | minor tail protein | tail | 1 | 16898 | 17701 |
| AVR56764.1 | MH045567_p23 | hypothetical protein | phrog_35459 | unknown function | unknown function | 1 | 19414 | 19896 |