Genomic map of Mycobacterium phage Coog (MH051250)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
MH051250
Definition
Mycobacterium phage Coog, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Fromanvirus; unclassified Fromanvirus.
DB of origin
NUCCORE
Length
51215
Host Name
Mycobacterium smegmatis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
84
%GC
60.98
Number of singletons
0
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
AVR76598.1 MH051250_p11 scaffolding protein phrog_233 head scaffolding protein head and packaging 1 10231 10740
AVR76647.1 MH051250_p64 hypothetical protein phrog_5957 unknown function unknown function -1 42727 43017
AVR76639.1 MH051250_p53 hypothetical protein phrog_5993 unknown function unknown function -1 38788 39045
AVR76615.1 MH051250_p28 hypothetical protein phrog_2235 minor tail protein tail 1 23997 24281
AVR76652.1 MH051250_p69 hypothetical protein phrog_6322 unknown function unknown function -1 44613 44765
AVR76669.1 MH051250_p58 hypothetical protein phrog_1498 unknown function unknown function -1 40030 40182
AVR76623.1 MH051250_p36 hypothetical protein phrog_14871 unknown function unknown function -1 28201 28530
AVR76592.1 MH051250_p5 hypothetical protein phrog_356 minor tail protein tail 1 3571 4233
AVR76642.1 MH051250_p59 hypothetical protein phrog_478 site-specific recombination directionality factor RDF integration and excision -1 40179 40568
AVR76663.1 MH051250_p80 hypothetical protein phrog_6093 unknown function unknown function -1 48582 48728
AVR76628.1 MH051250_p41 hypothetical protein phrog_364 ribonucleoside reductase class II DNA, RNA and nucleotide metabolism -1 31872 32408
AVR76645.1 MH051250_p62 hypothetical protein phrog_642 unknown function unknown function -1 41609 41911
AVR76622.1 MH051250_p35 hypothetical protein phrog_15233 unknown function unknown function -1 27887 28201
AVR76597.1 MH051250_p10 capsid maturation protease phrog_193 head maturation protease head and packaging 1 9337 10176
AVR76638.1 MH051250_p51 DNA primase phrog_47 DNA primase DNA, RNA and nucleotide metabolism -1 37907 38566
AVR76617.1 MH051250_p30 hypothetical protein phrog_733 excisionase integration and excision 1 26050 26412
AVR76627.1 MH051250_p40 ThyX-like thymidylate synthase phrog_85 thymidylate synthase DNA, RNA and nucleotide metabolism -1 31097 31816
AVR76589.1 MH051250_p2 hypothetical protein phrog_226 minor tail protein tail 1 840 1289
AVR76668.1 MH051250_p52 DNA primase phrog_360 DNA primase DNA, RNA and nucleotide metabolism -1 38376 38786
AVR76601.1 MH051250_p14 hypothetical protein phrog_2348 unknown function unknown function 1 12139 12282
AVR76636.1 MH051250_p49 hypothetical protein phrog_5242 unknown function unknown function -1 37354 37623
AVR76629.1 MH051250_p42 ribonucleotide reductase phrog_367 ribonucleotide reductase DNA, RNA and nucleotide metabolism -1 32434 34563
AVR76631.1 MH051250_p44 hypothetical protein phrog_1454 unknown function unknown function -1 34730 35035
AVR76634.1 MH051250_p47 hypothetical protein phrog_1167 phosphofructokinase other -1 36441 36935
AVR76602.1 MH051250_p15 hypothetical protein phrog_320 head closure Hc1 connector 1 12279 12641
AVR76593.1 MH051250_p6 lysin A phrog_1512 endolysin lysis 1 4409 5326
AVR76664.1 MH051250_p81 hypothetical protein phrog_6340 unknown function unknown function -1 48731 49144
AVR76608.1 MH051250_p21 tape measure protein phrog_305 tail length tape measure protein tail 1 15213 18551
AVR76650.1 MH051250_p67 hypothetical protein phrog_1178 unknown function unknown function -1 44123 44365
AVR76667.1 MH051250_p84 hypothetical protein phrog_8568 unknown function unknown function -1 50482 50715
AVR76632.1 MH051250_p45 hypothetical protein phrog_354 sigma-K factor transcription regulation -1 35054 35677
AVR76661.1 MH051250_p78 hypothetical protein phrog_5927 unknown function unknown function -1 47325 47540
AVR76657.1 MH051250_p74 hypothetical protein phrog_6186 unknown function unknown function -1 45663 46289
AVR76665.1 MH051250_p82 hypothetical protein phrog_21886 unknown function unknown function -1 49249 49407
AVR76648.1 MH051250_p65 immunity repressor phrog_357 transcriptional repressor transcription regulation -1 43030 43560
AVR76612.1 MH051250_p25 hypothetical protein phrog_981 minor tail protein tail 1 21974 22276
AVR76616.1 MH051250_p29 integrase phrog_95 integrase integration and excision -1 24333 25790
AVR76618.1 MH051250_p31 cytidine deaminase phrog_174 dCMP deaminase DNA, RNA and nucleotide metabolism -1 26512 27021
AVR76655.1 MH051250_p72 hypothetical protein phrog_5476 unknown function unknown function -1 45138 45449
AVR76620.1 MH051250_p33 hypothetical protein phrog_980 unknown function unknown function -1 27185 27403
AVR76671.1 MH051250_p56 hypothetical protein phrog_4539 unknown function unknown function -1 39859 39957
AVR76595.1 MH051250_p8 terminase phrog_9 terminase large subunit head and packaging 1 6156 7907
AVR76670.1 MH051250_p57 hypothetical protein phrog_6893 unknown function unknown function -1 39950 40033
AVR76606.1 MH051250_p20 tail assembly chaperone phrog_330 tail assembly chaperone tail 1 14325 14795
AVR76624.1 MH051250_p37 DNA polymerase I phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism -1 28579 30444
AVR76646.1 MH051250_p63 RecB-like nuclease phrog_69 exonuclease DNA, RNA and nucleotide metabolism -1 41915 42730
AVR76656.1 MH051250_p73 hypothetical protein phrog_6649 unknown function unknown function -1 45446 45652
AVR76666.1 MH051250_p83 hypothetical protein phrog_3471 unknown function unknown function -1 49410 49619
AVR76640.1 MH051250_p54 hypothetical protein phrog_10096 unknown function unknown function -1 39042 39254
AVR76649.1 MH051250_p66 hypothetical protein phrog_439 site-specific recombination directionality factor RDF integration and excision -1 43820 44122
AVR76609.1 MH051250_p22 minor tail protein phrog_106 minor tail protein tail 1 18617 19630
AVR76658.1 MH051250_p75 hypothetical protein phrog_9135 unknown function unknown function -1 46408 46626
AVR76644.1 MH051250_p61 hypothetical protein phrog_520 unknown function unknown function -1 41383 41634
AVR76603.1 MH051250_p16 hypothetical protein phrog_321 tail completion or Neck1 protein connector 1 12641 13054
AVR76600.1 MH051250_p13 hypothetical protein phrog_137 head-tail adaptor Ad1 connector 1 11768 12142
AVR76626.1 MH051250_p39 hypothetical protein phrog_517 HTH DNA binding protein DNA, RNA and nucleotide metabolism -1 30841 31053
AVR76635.1 MH051250_p48 hypothetical protein phrog_4195 unknown function unknown function -1 36932 37357
AVR76630.1 MH051250_p43 hypothetical protein phrog_499 unknown function unknown function -1 34560 34730
AVR76604.1 MH051250_p17 hypothetical protein phrog_123 tail terminator connector 1 13054 13461
AVR76659.1 MH051250_p76 hypothetical protein phrog_2124 unknown function unknown function -1 46626 46766
AVR76654.1 MH051250_p71 hypothetical protein phrog_2869 unknown function unknown function -1 44966 45118
AVR76599.1 MH051250_p12 major capsid protein phrog_10 major head protein head and packaging 1 10767 11699
AVR76643.1 MH051250_p60 DnaB-like helicase phrog_243 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism -1 40577 41383
AVR76625.1 MH051250_p38 hypothetical protein phrog_762 unknown function unknown function -1 30458 30844
AVR76588.1 MH051250_p1 HNH endonuclease phrog_333 HNH endonuclease DNA, RNA and nucleotide metabolism 1 503 802
AVR76641.1 MH051250_p55 hypothetical protein phrog_307 endonuclease VII DNA, RNA and nucleotide metabolism -1 39405 39869
AVR76591.1 MH051250_p4 hypothetical protein phrog_1197 tail protein tail 1 2354 3571
AVR76653.1 MH051250_p70 hypothetical protein phrog_5561 unknown function unknown function -1 44778 44957
AVR76637.1 MH051250_p50 hypothetical protein phrog_5270 unknown function unknown function -1 37620 37910
AVR76590.1 MH051250_p3 hypothetical protein phrog_1260 minor tail protein tail 1 1395 2357
AVR76651.1 MH051250_p68 hypothetical protein phrog_5066 unknown function unknown function -1 44362 44613
AVR76662.1 MH051250_p79 hypothetical protein phrog_3906 unknown function unknown function -1 47656 48489
AVR76619.1 MH051250_p32 hypothetical protein phrog_542 unknown function unknown function -1 27030 27188
AVR76660.1 MH051250_p77 hypothetical protein phrog_2059 anti-restriction protein moron, auxiliary metabolic gene and host takeover -1 46792 47307
AVR76614.1 MH051250_p27 minor tail protein phrog_2683 minor tail protein tail 1 22590 23987
AVR76621.1 MH051250_p34 hypothetical protein phrog_383 unknown function unknown function -1 27460 27900
AVR76613.1 MH051250_p26 hypothetical protein phrog_404 minor tail protein tail 1 22303 22593
AVR76605.1 MH051250_p18 major tail protein phrog_117 major tail protein tail 1 13476 14303
AVR76611.1 MH051250_p24 hypothetical protein phrog_352 minor tail protein tail 1 21517 21981
AVR76596.1 MH051250_p9 portal protein phrog_104 portal protein head and packaging 1 7907 9340
AVR76607.1 MH051250_p19 tail assembly chaperone phrog_393 tail assembly chaperone tail 1 14325 15208
AVR76594.1 MH051250_p7 lysin B phrog_102 endolysin lysis 1 5323 6132
AVR76633.1 MH051250_p46 hypothetical protein phrog_221 metallo-phosphoesterase other -1 35674 36444
AVR76610.1 MH051250_p23 minor tail protein phrog_110 minor tail protein tail 1 19707 21503