Genomic map of Mycobacterium phage Fameo (MH051252)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
MH051252
Definition
Mycobacterium phage Fameo, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Fromanvirus; unclassified Fromanvirus.
DB of origin
NUCCORE
Length
52618
Host Name
Mycobacterium smegmatis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
94
%GC
63.4
Number of singletons
0
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
AVR76832.1 MH051252_p63 hypothetical protein phrog_2187 unknown function unknown function -1 40218 40337
AVR76792.1 MH051252_p22 head-to-tail connector complex protein phrog_123 tail terminator connector 1 14661 15080
AVR76830.1 MH051252_p61 hypothetical protein phrog_1370 unknown function unknown function -1 39616 39753
AVR76799.1 MH051252_p29 minor tail protein phrog_352 minor tail protein tail 1 22085 22531
AVR76835.1 MH051252_p66 hypothetical protein phrog_397 unknown function unknown function -1 41427 41657
AVR76809.1 MH051252_p39 hypothetical protein phrog_383 unknown function unknown function -1 28281 28664
AVR76782.1 MH051252_p12 terminase large subunit phrog_9 terminase large subunit head and packaging 1 7454 9241
AVR76858.1 MH051252_p90 hypothetical protein phrog_6255 unknown function unknown function -1 49669 49929
AVR76775.1 MH051252_p5 HNH endonuclease phrog_333 HNH endonuclease DNA, RNA and nucleotide metabolism 1 2671 2967
AVR76823.1 MH051252_p53 membrane protein phrog_499 unknown function unknown function -1 36226 36408
AVR76772.1 MH051252_p2 hypothetical protein phrog_940 nuclease DNA, RNA and nucleotide metabolism 1 667 1497
AVR76841.1 MH051252_p72 exonuclease phrog_69 exonuclease DNA, RNA and nucleotide metabolism -1 43487 44305
AVR76861.1 MH051252_p93 hypothetical protein phrog_1445 unknown function unknown function -1 51005 51082
AVR76839.1 MH051252_p70 hypothetical protein phrog_520 unknown function unknown function -1 42946 43185
AVR76853.1 MH051252_p84 membrane protein phrog_3718 unknown function unknown function -1 48280 48576
AVR76791.1 MH051252_p21 head-to-tail connector complex protein phrog_321 tail completion or Neck1 protein connector 1 14329 14664
AVR76826.1 MH051252_p56 MRE11 double-strand break endo/exonuclease phrog_221 metallo-phosphoesterase other -1 37244 38014
AVR76838.1 MH051252_p69 hypothetical protein phrog_2731 unknown function unknown function -1 42812 42949
AVR76812.1 MH051252_p42 hypothetical protein phrog_3283 unknown function unknown function -1 29208 29435
AVR76806.1 MH051252_p36 hypothetical protein phrog_549 unknown function unknown function 1 27420 27818
AVR76818.1 MH051252_p48 hypothetical protein phrog_690 unknown function unknown function -1 32423 32632
AVR76773.1 MH051252_p3 hypothetical protein phrog_5234 unknown function unknown function 1 1545 2357
AVR76771.1 MH051252_p1 hypothetical protein phrog_7736 unknown function unknown function 1 331 447
AVR76777.1 MH051252_p7 minor tail protein phrog_1260 minor tail protein tail 1 3563 4528
AVR76817.1 MH051252_p47 helix-turn-helix DNA binding domain protein phrog_517 HTH DNA binding protein DNA, RNA and nucleotide metabolism -1 32004 32426
AVR76842.1 MH051252_p73 hypothetical protein phrog_1562 unknown function unknown function -1 44302 44721
AVR76803.1 MH051252_p33 hypothetical protein phrog_13711 unknown function unknown function 1 25269 25433
AVR76828.1 MH051252_p58 glutaredoxin phrog_22 thioredoxin domain DNA, RNA and nucleotide metabolism -1 38502 38774
AVR76821.1 MH051252_p51 ribonucleotide reductase phrog_367 ribonucleotide reductase DNA, RNA and nucleotide metabolism -1 33966 36026
AVR76855.1 MH051252_p87 hypothetical protein phrog_586 unknown function unknown function -1 48955 49308
AVR76864.1 MH051252_p60 DNA primase phrog_360 DNA primase DNA, RNA and nucleotide metabolism -1 39234 39638
AVR76852.1 MH051252_p83 hypothetical protein phrog_855 unknown function unknown function -1 48132 48269
AVR76801.1 MH051252_p31 minor tail protein phrog_737 minor tail protein tail 1 22816 25014
AVR76814.1 MH051252_p44 DNA polymerase I phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism -1 29685 31472
AVR76845.1 MH051252_p76 hypothetical protein phrog_4569 unknown function unknown function -1 45917 46171
AVR76829.1 MH051252_p59 DNA primase phrog_47 DNA primase DNA, RNA and nucleotide metabolism -1 38774 39406
AVR76785.1 MH051252_p15 scaffolding protein phrog_233 head scaffolding protein head and packaging 1 11633 12145
AVR76833.1 MH051252_p64 hydrolase phrog_789 esterase/lipase other -1 40337 41173
AVR76787.1 MH051252_p17 hypothetical protein phrog_748 head-tail connector protein connector 1 13210 13392
AVR76844.1 MH051252_p75 hypothetical protein phrog_1173 unknown function unknown function -1 45606 45770
AVR76834.1 MH051252_p65 helix-turn-helix DNA binding domain protein phrog_1123 unknown function unknown function -1 41170 41427
AVR76793.1 MH051252_p23 major tail protein phrog_117 major tail protein tail 1 15099 15683
AVR76819.1 MH051252_p49 thymidylate synthase phrog_85 thymidylate synthase DNA, RNA and nucleotide metabolism -1 32634 33359
AVR76798.1 MH051252_p28 minor tail protein phrog_110 minor tail protein tail 1 20236 22008
AVR76822.1 MH051252_p52 hypothetical protein phrog_2046 unknown function unknown function -1 36026 36229
AVR76779.1 MH051252_p9 lysin A phrog_317 endolysin lysis 1 4800 6035
AVR76805.1 MH051252_p35 membrane protein phrog_733 excisionase integration and excision 1 26939 27373
AVR76850.1 MH051252_p81 hypothetical protein phrog_439 site-specific recombination directionality factor RDF integration and excision -1 47072 47377
AVR76827.1 MH051252_p57 hypothetical protein phrog_1167 phosphofructokinase other -1 38011 38505
AVR76831.1 MH051252_p62 endonuclease VII phrog_307 endonuclease VII DNA, RNA and nucleotide metabolism -1 39779 40252
AVR76776.1 MH051252_p6 terminase small subunit phrog_226 minor tail protein tail 1 3008 3478
AVR76815.1 MH051252_p45 hypothetical protein phrog_2094 unknown function unknown function -1 31481 31819
AVR76860.1 MH051252_p92 hypothetical protein phrog_2499 unknown function unknown function -1 50804 50977
AVR76810.1 MH051252_p40 hypothetical protein phrog_2099 unknown function unknown function -1 28661 28927
AVR76790.1 MH051252_p20 head-to-tail connector complex protein phrog_320 head closure Hc1 connector 1 13961 14329
AVR76789.1 MH051252_p19 hypothetical protein phrog_830 head-tail connector protein connector 1 13770 13964
AVR76794.1 MH051252_p25 tail assembly chaperone phrog_330 tail assembly chaperone tail 1 15843 16250
AVR76813.1 MH051252_p43 hypothetical protein phrog_896 unknown function unknown function -1 29435 29653
AVR76849.1 MH051252_p80 hypothetical protein phrog_1477 unknown function unknown function -1 46941 47072
AVR76857.1 MH051252_p89 hypothetical protein phrog_1946 unknown function unknown function -1 49469 49669
AVR76848.1 MH051252_p79 hypothetical protein phrog_3351 unknown function unknown function -1 46708 46941
AVR76862.1 MH051252_p94 hypothetical protein phrog_1676 unknown function unknown function -1 51116 51403
AVR76825.1 MH051252_p55 hypothetical protein phrog_2436 unknown function unknown function -1 37091 37240
AVR76788.1 MH051252_p18 head-to-tail connector complex protein phrog_137 head-tail adaptor Ad1 connector 1 13396 13773
AVR76797.1 MH051252_p27 minor tail protein phrog_106 minor tail protein tail 1 19223 20239
AVR76778.1 MH051252_p8 hypothetical protein phrog_1087 unknown function unknown function 1 4642 4800
AVR76802.1 MH051252_p32 hypothetical protein phrog_2570 unknown function unknown function 1 25078 25272
AVR76847.1 MH051252_p78 hypothetical protein phrog_1875 unknown function unknown function -1 46472 46711
AVR76784.1 MH051252_p14 capsid maturation protease phrog_193 head maturation protease head and packaging 1 10698 11582
AVR76796.1 MH051252_p26 tape measure protein phrog_305 tail length tape measure protein tail 1 16665 19202
AVR76816.1 MH051252_p46 hypothetical protein phrog_3812 unknown function unknown function -1 31819 32004
AVR76811.1 MH051252_p41 hypothetical protein phrog_3771 unknown function unknown function -1 28924 29208
AVR76780.1 MH051252_p10 holin phrog_526 holin lysis 1 6032 6451
AVR76843.1 MH051252_p74 immunity repressor phrog_357 transcriptional repressor transcription regulation -1 44785 45363
AVR76824.1 MH051252_p54 hypothetical protein phrog_354 sigma-K factor transcription regulation -1 36408 37094
AVR76786.1 MH051252_p16 major capsid protein phrog_10 major head protein head and packaging 1 12175 13140
AVR76863.1 MH051252_p85 hypothetical protein phrog_9713 unknown function unknown function -1 48573 48644
AVR76840.1 MH051252_p71 hypothetical protein phrog_642 unknown function unknown function -1 43214 43438
AVR76774.1 MH051252_p4 hypothetical protein phrog_3585 immunity protein other 1 2357 2674
AVR76783.1 MH051252_p13 portal protein phrog_104 portal protein head and packaging 1 9238 10701
AVR76846.1 MH051252_p77 hypothetical protein phrog_1178 unknown function unknown function -1 46173 46475
AVR76781.1 MH051252_p11 lysin B phrog_102 endolysin lysis 1 6448 7431
AVR76808.1 MH051252_p38 hypothetical protein phrog_9463 unknown function unknown function -1 28087 28284
AVR76804.1 MH051252_p34 integrase phrog_1 integrase integration and excision -1 25430 26494
AVR76851.1 MH051252_p82 hypothetical protein phrog_421 unknown function unknown function -1 47374 48132
AVR76837.1 MH051252_p68 dsDNA helicase phrog_243 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism -1 41996 42802
AVR76836.1 MH051252_p67 membrane protein phrog_542 unknown function unknown function -1 41795 41968
AVR76800.1 MH051252_p30 minor tail protein phrog_404 minor tail protein tail 1 22528 22815
AVR76807.1 MH051252_p37 excise phrog_66 excisionase and transcriptional regulator integration and excision -1 27917 28087
AVR76856.1 MH051252_p88 hypothetical protein phrog_519 unknown function unknown function -1 49305 49472
AVR76820.1 MH051252_p50 hypothetical protein phrog_364 ribonucleoside reductase class II DNA, RNA and nucleotide metabolism -1 33436 33969
AVR76859.1 MH051252_p91 hypothetical protein phrog_1617 unknown function unknown function -1 49926 50807
AVR76854.1 MH051252_p86 hypothetical protein phrog_2223 unknown function unknown function -1 48641 48958
AVR76795.1 MH051252_p24 tail assembly chaperone phrog_393 tail assembly chaperone tail 1 15843 16675