| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
MH051254 |
Definition |
Mycobacterium phage Jabiru, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Fromanvirus; unclassified Fromanvirus. |
DB of origin |
NUCCORE |
Length |
50530 |
Host Name |
Mycobacterium smegmatis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
86 |
%GC |
59.98 |
Number of singletons |
1 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| AVR77014.1 | MH051254_p63 | hypothetical protein | phrog_8372 | unknown function | unknown function | -1 | 40258 | 40431 |
| AVR76958.1 | MH051254_p6 | lysin A | phrog_1512 | endolysin | lysis | 1 | 4242 | 5183 |
| AVR77026.1 | MH051254_p75 | hypothetical protein | phrog_5561 | unknown function | unknown function | -1 | 45179 | 45358 |
| AVR77022.1 | MH051254_p71 | hypothetical protein | singleton | unknown function | unknown function | -1 | 44173 | 44361 |
| AVR77018.1 | MH051254_p67 | hypothetical protein | phrog_642 | unknown function | unknown function | -1 | 42016 | 42318 |
| AVR77007.1 | MH051254_p56 | hypothetical protein | phrog_5993 | unknown function | unknown function | -1 | 38599 | 38850 |
| AVR76987.1 | MH051254_p35 | hypothetical protein | phrog_383 | unknown function | unknown function | -1 | 27127 | 27573 |
| AVR77021.1 | MH051254_p70 | immunity repressor | phrog_357 | transcriptional repressor | transcription regulation | -1 | 43437 | 43967 |
| AVR77003.1 | MH051254_p51 | hypothetical protein | phrog_4195 | unknown function | unknown function | -1 | 36767 | 37168 |
| AVR77012.1 | MH051254_p61 | hypothetical protein | phrog_6893 | unknown function | unknown function | -1 | 40029 | 40112 |
| AVR76980.1 | MH051254_p28 | hypothetical protein | phrog_2235 | minor tail protein | tail | 1 | 23299 | 23628 |
| AVR76963.1 | MH051254_p11 | scaffolding protein | phrog_233 | head scaffolding protein | head and packaging | 1 | 10140 | 10652 |
| AVR76968.1 | MH051254_p16 | hypothetical protein | phrog_321 | tail completion or Neck1 protein | connector | 1 | 12562 | 12975 |
| AVR76982.1 | MH051254_p30 | integrase | phrog_95 | integrase | integration and excision | -1 | 23983 | 25464 |
| AVR76964.1 | MH051254_p12 | major capsid protein | phrog_10 | major head protein | head and packaging | 1 | 10679 | 11620 |
| AVR77024.1 | MH051254_p73 | hypothetical protein | phrog_5066 | unknown function | unknown function | -1 | 44751 | 45017 |
| AVR76998.1 | MH051254_p46 | hypothetical protein | phrog_1454 | unknown function | unknown function | -1 | 34571 | 34807 |
| AVR76976.1 | MH051254_p24 | minor tail protein | phrog_352 | minor tail protein | tail | 1 | 20839 | 21303 |
| AVR76995.1 | MH051254_p43 | ribonucleotide reductase | phrog_367 | ribonucleotide reductase | DNA, RNA and nucleotide metabolism | -1 | 32168 | 34204 |
| AVR76960.1 | MH051254_p8 | terminase | phrog_9 | terminase large subunit | head and packaging | 1 | 6013 | 7764 |
| AVR77001.1 | MH051254_p49 | metallophosphoesterase | phrog_221 | metallo-phosphoesterase | other | -1 | 35515 | 36285 |
| AVR76991.1 | MH051254_p39 | hypothetical protein | phrog_762 | unknown function | unknown function | -1 | 30215 | 30604 |
| AVR77031.1 | MH051254_p80 | hypothetical protein | phrog_5927 | unknown function | unknown function | -1 | 46714 | 46929 |
| AVR77000.1 | MH051254_p48 | hypothetical protein | phrog_354 | sigma-K factor | transcription regulation | -1 | 34895 | 35518 |
| AVR77019.1 | MH051254_p68 | RecB-like nuclease | phrog_69 | exonuclease | DNA, RNA and nucleotide metabolism | -1 | 42322 | 43137 |
| AVR77016.1 | MH051254_p65 | DnaB-like helicase | phrog_243 | DnaB-like replicative helicase | DNA, RNA and nucleotide metabolism | -1 | 40826 | 41632 |
| AVR76971.1 | MH051254_p20 | tail assembly chaperone | phrog_330 | tail assembly chaperone | tail | 1 | 14338 | 14718 |
| AVR76979.1 | MH051254_p27 | minor tail protein | phrog_2683 | minor tail protein | tail | 1 | 21912 | 23294 |
| AVR76997.1 | MH051254_p45 | hypothetical protein | phrog_499 | unknown function | unknown function | -1 | 34401 | 34571 |
| AVR76965.1 | MH051254_p13 | hypothetical protein | phrog_137 | head-tail adaptor Ad1 | connector | 1 | 11689 | 12063 |
| AVR76953.1 | MH051254_p1 | HNH endonuclease | phrog_333 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 502 | 801 |
| AVR77002.1 | MH051254_p50 | hypothetical protein | phrog_1167 | phosphofructokinase | other | -1 | 36282 | 36770 |
| AVR77004.1 | MH051254_p52 | hypothetical protein | phrog_5242 | unknown function | unknown function | -1 | 37165 | 37434 |
| AVR76956.1 | MH051254_p4 | hypothetical protein | phrog_1197 | tail protein | tail | 1 | 2354 | 3403 |
| AVR77011.1 | MH051254_p60 | hypothetical protein | phrog_4539 | unknown function | unknown function | -1 | 39938 | 40036 |
| AVR77023.1 | MH051254_p72 | hypothetical protein | phrog_1178 | unknown function | unknown function | -1 | 44512 | 44754 |
| AVR76967.1 | MH051254_p15 | hypothetical protein | phrog_320 | head closure Hc1 | connector | 1 | 12200 | 12562 |
| AVR76996.1 | MH051254_p44 | hypothetical protein | phrog_1673 | unknown function | unknown function | -1 | 34201 | 34404 |
| AVR77017.1 | MH051254_p66 | hypothetical protein | phrog_520 | unknown function | unknown function | -1 | 41787 | 42041 |
| AVR77009.1 | MH051254_p58 | hypothetical protein | phrog_397 | unknown function | unknown function | -1 | 39121 | 39387 |
| AVR76955.1 | MH051254_p3 | hypothetical protein | phrog_1260 | minor tail protein | tail | 1 | 1395 | 2357 |
| AVR76985.1 | MH051254_p33 | hypothetical protein | phrog_15643 | unknown function | unknown function | -1 | 26718 | 26861 |
| AVR77008.1 | MH051254_p57 | hypothetical protein | phrog_15660 | unknown function | unknown function | -1 | 38847 | 39011 |
| AVR77030.1 | MH051254_p79 | hypothetical protein | phrog_2059 | anti-restriction protein | moron, auxiliary metabolic gene and host takeover | -1 | 46181 | 46717 |
| AVR77010.1 | MH051254_p59 | endonuclease VII | phrog_307 | endonuclease VII | DNA, RNA and nucleotide metabolism | -1 | 39484 | 39948 |
| AVR76999.1 | MH051254_p47 | hypothetical protein | phrog_5897 | unknown function | unknown function | -1 | 34794 | 34895 |
| AVR76989.1 | MH051254_p37 | hypothetical protein | phrog_2650 | unknown function | unknown function | -1 | 27844 | 28287 |
| AVR76984.1 | MH051254_p32 | cytidine deaminase | phrog_174 | dCMP deaminase | DNA, RNA and nucleotide metabolism | -1 | 26219 | 26731 |
| AVR76994.1 | MH051254_p42 | hypothetical protein | phrog_364 | ribonucleoside reductase class II | DNA, RNA and nucleotide metabolism | -1 | 31618 | 32142 |
| AVR76992.1 | MH051254_p40 | HTH binding domain protein | phrog_517 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 30614 | 30865 |
| AVR76975.1 | MH051254_p23 | minor tail protein | phrog_110 | minor tail protein | tail | 1 | 19026 | 20825 |
| AVR77028.1 | MH051254_p77 | hypothetical protein | phrog_6649 | unknown function | unknown function | -1 | 45699 | 45905 |
| AVR77038.1 | MH051254_p55 | DNA primase | phrog_360 | DNA primase | DNA, RNA and nucleotide metabolism | -1 | 38187 | 38597 |
| AVR76981.1 | MH051254_p29 | hypothetical protein | phrog_1712 | unknown function | unknown function | -1 | 23687 | 23986 |
| AVR76990.1 | MH051254_p38 | DNA polymerase I | phrog_17 | DNA polymerase | DNA, RNA and nucleotide metabolism | -1 | 28336 | 30201 |
| AVR77020.1 | MH051254_p69 | hypothetical protein | phrog_5957 | unknown function | unknown function | -1 | 43134 | 43421 |
| AVR77013.1 | MH051254_p62 | hypothetical protein | phrog_1498 | unknown function | unknown function | -1 | 40109 | 40261 |
| AVR77032.1 | MH051254_p81 | hypothetical protein | phrog_3906 | unknown function | unknown function | -1 | 47045 | 47878 |
| AVR76961.1 | MH051254_p9 | portal protein | phrog_104 | portal protein | head and packaging | 1 | 7815 | 9248 |
| AVR76988.1 | MH051254_p36 | hypothetical protein | phrog_5282 | unknown function | unknown function | -1 | 27563 | 27847 |
| AVR76973.1 | MH051254_p21 | tape measure protein | phrog_305 | tail length tape measure protein | tail | 1 | 15139 | 17952 |
| AVR77034.1 | MH051254_p83 | hypothetical protein | phrog_6340 | unknown function | unknown function | -1 | 48128 | 48541 |
| AVR77006.1 | MH051254_p54 | DNA primase | phrog_47 | DNA primase | DNA, RNA and nucleotide metabolism | -1 | 37715 | 38377 |
| AVR77033.1 | MH051254_p82 | hypothetical protein | phrog_6093 | unknown function | unknown function | -1 | 47967 | 48125 |
| AVR76972.1 | MH051254_p19 | tail assembly chaperone | phrog_393 | tail assembly chaperone | tail | 1 | 14338 | 15134 |
| AVR76954.1 | MH051254_p2 | hypothetical protein | phrog_226 | minor tail protein | tail | 1 | 839 | 1288 |
| AVR76957.1 | MH051254_p5 | hypothetical protein | phrog_356 | minor tail protein | tail | 1 | 3407 | 4048 |
| AVR76970.1 | MH051254_p18 | major tail protein | phrog_117 | major tail protein | tail | 1 | 13398 | 14228 |
| AVR77027.1 | MH051254_p76 | hypothetical protein | phrog_5476 | unknown function | unknown function | -1 | 45355 | 45702 |
| AVR77037.1 | MH051254_p86 | hypothetical protein | phrog_3471 | unknown function | unknown function | -1 | 48898 | 49146 |
| AVR76978.1 | MH051254_p26 | minor tail protein | phrog_404 | minor tail protein | tail | 1 | 21595 | 21915 |
| AVR77005.1 | MH051254_p53 | hypothetical protein | phrog_5270 | unknown function | unknown function | -1 | 37431 | 37718 |
| AVR76993.1 | MH051254_p41 | ThyX-like thymidylate synthase | phrog_85 | thymidylate synthase | DNA, RNA and nucleotide metabolism | -1 | 30858 | 31562 |
| AVR76977.1 | MH051254_p25 | minor tail protein | phrog_981 | minor tail protein | tail | 1 | 21296 | 21598 |
| AVR77035.1 | MH051254_p84 | hypothetical protein | phrog_1445 | unknown function | unknown function | -1 | 48572 | 48652 |
| AVR76962.1 | MH051254_p10 | capsid maturation protease | phrog_193 | head maturation protease | head and packaging | 1 | 9245 | 10084 |
| AVR77025.1 | MH051254_p74 | hypothetical protein | phrog_6322 | unknown function | unknown function | -1 | 45014 | 45166 |
| AVR77029.1 | MH051254_p78 | hypothetical protein | phrog_2124 | unknown function | unknown function | -1 | 46024 | 46164 |
| AVR76966.1 | MH051254_p14 | hypothetical protein | phrog_2348 | unknown function | unknown function | 1 | 12060 | 12203 |
| AVR76974.1 | MH051254_p22 | minor tail protein | phrog_106 | minor tail protein | tail | 1 | 18016 | 19029 |
| AVR77036.1 | MH051254_p85 | hypothetical protein | phrog_9783 | unknown function | unknown function | -1 | 48753 | 48839 |
| AVR76983.1 | MH051254_p31 | hypothetical protein | phrog_733 | excisionase | integration and excision | 1 | 25700 | 26119 |
| AVR76969.1 | MH051254_p17 | hypothetical protein | phrog_123 | tail terminator | connector | 1 | 12975 | 13382 |
| AVR76986.1 | MH051254_p34 | hypothetical protein | phrog_980 | unknown function | unknown function | -1 | 26861 | 27070 |
| AVR77015.1 | MH051254_p64 | hypothetical protein | phrog_478 | site-specific recombination directionality factor RDF | integration and excision | -1 | 40428 | 40817 |
| AVR76959.1 | MH051254_p7 | lysin B | phrog_102 | endolysin | lysis | 1 | 5180 | 5989 |