| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
MH051255 |
Definition |
Mycobacterium phage Leston, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Timquatrovirus; unclassified Timquatrovirus. |
DB of origin |
NUCCORE |
Length |
61808 |
Host Name |
Mycobacterium smegmatis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
94 |
%GC |
64.94 |
Number of singletons |
0 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| AVR77093.1 | MH051255_p54 | hypothetical protein | phrog_1674 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 40333 | 41193 |
| AVR77129.1 | MH051255_p15 | major tail protein | phrog_117 | major tail protein | tail | 1 | 10660 | 11271 |
| AVR77108.1 | MH051255_p41 | hypothetical protein | phrog_1702 | transcriptional repressor | transcription regulation | 1 | 34584 | 34931 |
| AVR77059.1 | MH051255_p66 | hypothetical protein | phrog_5505 | unknown function | unknown function | 1 | 48928 | 49143 |
| AVR77050.1 | MH051255_p87 | hypothetical protein | phrog_2433 | unknown function | unknown function | 1 | 57198 | 57884 |
| AVR77103.1 | MH051255_p36 | hypothetical protein | phrog_2311 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 30859 | 31224 |
| AVR77117.1 | MH051255_p20 | minor tail protein | phrog_110 | minor tail protein | tail | 1 | 17625 | 19397 |
| AVR77107.1 | MH051255_p40 | immunity repressor | phrog_1746 | transcriptional repressor | transcription regulation | -1 | 34046 | 34396 |
| AVR77088.1 | MH051255_p49 | hypothetical protein | phrog_1956 | unknown function | unknown function | 1 | 38662 | 38940 |
| AVR77079.1 | MH051255_p62 | DNA primase/polymerase | phrog_10729 | DNA polymerase/primase | DNA, RNA and nucleotide metabolism | 1 | 43705 | 45852 |
| AVR77069.1 | MH051255_p76 | hypothetical protein | phrog_9980 | unknown function | unknown function | 1 | 52274 | 52858 |
| AVR77044.1 | MH051255_p6 | portal protein | phrog_104 | portal protein | head and packaging | 1 | 2791 | 4326 |
| AVR77075.1 | MH051255_p58 | hypothetical protein | phrog_1911 | unknown function | unknown function | 1 | 41880 | 42452 |
| AVR77128.1 | MH051255_p14 | hypothetical protein | phrog_123 | tail terminator | connector | 1 | 10197 | 10619 |
| AVR77100.1 | MH051255_p33 | hypothetical protein | phrog_284 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 29054 | 30271 |
| AVR77127.1 | MH051255_p13 | hypothetical protein | phrog_387 | neck protein | connector | 1 | 10000 | 10200 |
| AVR77048.1 | MH051255_p85 | hypothetical protein | phrog_9985 | unknown function | unknown function | 1 | 56395 | 56667 |
| AVR77126.1 | MH051255_p12 | hypothetical protein | phrog_763 | head-tail adaptor | connector | 1 | 9600 | 9962 |
| AVR77058.1 | MH051255_p65 | hypothetical protein | phrog_908 | unknown function | unknown function | 1 | 48001 | 48834 |
| AVR77125.1 | MH051255_p11 | hypothetical protein | phrog_137 | head-tail adaptor Ad1 | connector | 1 | 9217 | 9600 |
| AVR77102.1 | MH051255_p35 | hypothetical protein | phrog_1042 | unknown function | unknown function | 1 | 30386 | 30643 |
| AVR77091.1 | MH051255_p52 | hypothetical protein | phrog_2870 | unknown function | unknown function | 1 | 39909 | 40172 |
| AVR77056.1 | MH051255_p93 | hypothetical protein | phrog_10816 | unknown function | unknown function | 1 | 61199 | 61378 |
| AVR77086.1 | MH051255_p47 | hypothetical protein | phrog_301 | secreted protein | other | 1 | 38092 | 38430 |
| AVR77089.1 | MH051255_p50 | hypothetical protein | phrog_10462 | unknown function | unknown function | 1 | 38937 | 39089 |
| AVR77042.1 | MH051255_p4 | terminase small subunit | phrog_1459 | terminase small subunit | head and packaging | 1 | 1131 | 1358 |
| AVR77092.1 | MH051255_p53 | hypothetical protein | phrog_1498 | unknown function | unknown function | 1 | 40169 | 40336 |
| AVR77051.1 | MH051255_p88 | hypothetical protein | phrog_7638 | unknown function | unknown function | 1 | 57994 | 58353 |
| AVR77112.1 | MH051255_p27 | hypothetical protein | phrog_240 | head protein | head and packaging | 1 | 25155 | 25517 |
| AVR77114.1 | MH051255_p29 | lysin B | phrog_102 | endolysin | lysis | 1 | 27176 | 28048 |
| AVR77052.1 | MH051255_p89 | hypothetical protein | phrog_6842 | unknown function | unknown function | 1 | 58573 | 58902 |
| AVR77065.1 | MH051255_p72 | hypothetical protein | phrog_5035 | unknown function | unknown function | 1 | 50982 | 51239 |
| AVR77081.1 | MH051255_p64 | RusA-like resolvase | phrog_244 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 47546 | 48001 |
| AVR77118.1 | MH051255_p21 | hypothetical protein | phrog_1697 | minor tail protein | tail | 1 | 19398 | 19907 |
| AVR77078.1 | MH051255_p61 | hypothetical protein | phrog_1571 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 43294 | 43674 |
| AVR77083.1 | MH051255_p44 | hypothetical protein | phrog_2286 | unknown function | unknown function | 1 | 35475 | 36206 |
| AVR77071.1 | MH051255_p78 | hypothetical protein | phrog_3167 | unknown function | unknown function | 1 | 53600 | 53965 |
| AVR77054.1 | MH051255_p91 | hypothetical protein | phrog_8588 | unknown function | unknown function | 1 | 59369 | 59671 |
| AVR77115.1 | MH051255_p18 | tape measure protein | phrog_971 | endolysin | lysis | 1 | 12267 | 16376 |
| AVR77076.1 | MH051255_p59 | hypothetical protein | phrog_22 | thioredoxin domain | DNA, RNA and nucleotide metabolism | 1 | 42561 | 42809 |
| AVR77049.1 | MH051255_p86 | hypothetical protein | phrog_10190 | DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 56669 | 57073 |
| AVR77061.1 | MH051255_p68 | hypothetical protein | phrog_2342 | unknown function | unknown function | 1 | 49344 | 50198 |
| AVR77074.1 | MH051255_p81 | hypothetical protein | phrog_2493 | unknown function | unknown function | 1 | 54829 | 55506 |
| AVR77121.1 | MH051255_p24 | minor tail protein | phrog_346 | minor tail protein | tail | 1 | 21290 | 23788 |
| AVR77077.1 | MH051255_p60 | hypothetical protein | phrog_10696 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 42806 | 43297 |
| AVR77064.1 | MH051255_p71 | hypothetical protein | phrog_2869 | unknown function | unknown function | 1 | 50775 | 50972 |
| AVR77122.1 | MH051255_p8 | hypothetical protein | phrog_1757 | unknown function | unknown function | 1 | 7135 | 7335 |
| AVR77120.1 | MH051255_p23 | hypothetical protein | phrog_1736 | minor tail protein | tail | 1 | 20989 | 21306 |
| AVR77094.1 | MH051255_p55 | hypothetical protein | phrog_10500 | unknown function | unknown function | 1 | 41190 | 41414 |
| AVR77097.1 | MH051255_p30 | holin | phrog_565 | holin | lysis | 1 | 28090 | 28497 |
| AVR77039.1 | MH051255_p1 | hypothetical protein | phrog_10556 | unknown function | unknown function | 1 | 55 | 303 |
| AVR77073.1 | MH051255_p80 | hypothetical protein | phrog_2822 | unknown function | unknown function | 1 | 54195 | 54836 |
| AVR77047.1 | MH051255_p84 | hypothetical protein | phrog_2974 | unknown function | unknown function | 1 | 56066 | 56311 |
| AVR77090.1 | MH051255_p51 | hypothetical protein | phrog_192 | DNA polymerase exonuclease subunit | DNA, RNA and nucleotide metabolism | 1 | 39118 | 39897 |
| AVR77132.1 | MH051255_p7 | capsid maturation protease | phrog_1752 | head maturation protease | head and packaging | 1 | 4277 | 7138 |
| AVR77072.1 | MH051255_p79 | hypothetical protein | phrog_8575 | unknown function | unknown function | 1 | 53962 | 54195 |
| AVR77105.1 | MH051255_p38 | hypothetical protein | phrog_15740 | unknown function | unknown function | 1 | 32911 | 33051 |
| AVR77111.1 | MH051255_p26 | minor tail protein | phrog_416 | minor tail protein | tail | 1 | 24063 | 25130 |
| AVR77087.1 | MH051255_p48 | hypothetical protein | phrog_9124 | unknown function | unknown function | 1 | 38435 | 38665 |
| AVR77063.1 | MH051255_p70 | hypothetical protein | phrog_5135 | unknown function | unknown function | 1 | 50443 | 50778 |
| AVR77096.1 | MH051255_p57 | hypothetical protein | phrog_2388 | unknown function | unknown function | 1 | 41677 | 41799 |
| AVR77082.1 | MH051255_p43 | hypothetical protein | phrog_11593 | unknown function | unknown function | 1 | 35201 | 35353 |
| AVR77099.1 | MH051255_p32 | hypothetical protein | phrog_1738 | unknown function | unknown function | 1 | 28816 | 29070 |
| AVR77066.1 | MH051255_p73 | hypothetical protein | phrog_3868 | unknown function | unknown function | 1 | 51226 | 51732 |
| AVR77046.1 | MH051255_p83 | hypothetical protein | phrog_3665 | unknown function | unknown function | 1 | 55808 | 55954 |
| AVR77084.1 | MH051255_p45 | hypothetical protein | phrog_2781 | unknown function | unknown function | 1 | 36247 | 36882 |
| AVR77040.1 | MH051255_p2 | hypothetical protein | phrog_2074 | unknown function | unknown function | 1 | 300 | 545 |
| AVR77098.1 | MH051255_p31 | hypothetical protein | phrog_404 | minor tail protein | tail | 1 | 28554 | 28829 |
| AVR77131.1 | MH051255_p16 | tail assembly chaperone | phrog_1326 | tail assembly chaperone | tail | 1 | 11408 | 12249 |
| AVR77045.1 | MH051255_p82 | hypothetical protein | phrog_980 | unknown function | unknown function | 1 | 55497 | 55811 |
| AVR77113.1 | MH051255_p28 | lysin A | phrog_317 | endolysin | lysis | 1 | 25566 | 27179 |
| AVR77053.1 | MH051255_p90 | hypothetical protein | phrog_6135 | unknown function | unknown function | 1 | 59006 | 59266 |
| AVR77070.1 | MH051255_p77 | hypothetical protein | phrog_14301 | RNA ligase | DNA, RNA and nucleotide metabolism | 1 | 53010 | 53603 |
| AVR77067.1 | MH051255_p74 | hypothetical protein | phrog_5288 | unknown function | unknown function | 1 | 51726 | 51989 |
| AVR77062.1 | MH051255_p69 | hypothetical protein | phrog_7217 | unknown function | unknown function | 1 | 50195 | 50446 |
| AVR77041.1 | MH051255_p3 | hypothetical protein | phrog_2293 | unknown function | unknown function | 1 | 542 | 772 |
| AVR77123.1 | MH051255_p9 | scaffolding protein | phrog_4638 | head scaffolding protein | head and packaging | 1 | 7384 | 8013 |
| AVR77104.1 | MH051255_p37 | integrase | phrog_95 | integrase | integration and excision | 1 | 31447 | 32853 |
| AVR77101.1 | MH051255_p34 | hypothetical protein | phrog_16066 | unknown function | unknown function | 1 | 30271 | 30432 |
| AVR77109.1 | MH051255_p42 | hypothetical protein | phrog_2908 | unknown function | unknown function | 1 | 34934 | 35122 |
| AVR77085.1 | MH051255_p46 | hypothetical protein | phrog_947 | DNA polymerase processivity factor | DNA, RNA and nucleotide metabolism | 1 | 36920 | 38050 |
| AVR77080.1 | MH051255_p63 | helicase | phrog_16 | DNA helicase | DNA, RNA and nucleotide metabolism | 1 | 45849 | 47558 |
| AVR77106.1 | MH051255_p39 | hypothetical protein | phrog_950 | unknown function | unknown function | -1 | 33081 | 33923 |
| AVR77116.1 | MH051255_p19 | minor tail protein | phrog_106 | minor tail protein | tail | 1 | 16453 | 17583 |
| AVR77124.1 | MH051255_p10 | major capsid protein | phrog_10 | major head protein | head and packaging | 1 | 8085 | 9017 |
| AVR77057.1 | MH051255_p94 | HNH endonuclease | phrog_338 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 61375 | 61680 |
| AVR77055.1 | MH051255_p92 | hypothetical protein | phrog_10342 | DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 59810 | 60217 |
| AVR77043.1 | MH051255_p5 | terminase large subunit | phrog_2 | terminase large subunit | head and packaging | 1 | 1351 | 2778 |
| AVR77119.1 | MH051255_p22 | minor tail protein | phrog_1565 | minor tail protein | tail | 1 | 19904 | 20989 |
| AVR77110.1 | MH051255_p25 | hypothetical protein | phrog_10753 | unknown function | unknown function | 1 | 23801 | 24079 |
| AVR77060.1 | MH051255_p67 | hypothetical protein | phrog_11424 | unknown function | unknown function | 1 | 49177 | 49347 |
| AVR77068.1 | MH051255_p75 | hypothetical protein | phrog_666 | unknown function | unknown function | 1 | 51994 | 52203 |
| AVR77095.1 | MH051255_p56 | hypothetical protein | phrog_1581 | unknown function | unknown function | 1 | 41411 | 41623 |
| AVR77130.1 | MH051255_p17 | tail assembly chaperone | phrog_1861 | unknown function | unknown function | 1 | 11408 | 11854 |