Genomic map of Mycobacterium phage SamScheppers (MH051258)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
MH051258
Definition
Mycobacterium phage SamScheppers, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Timquatrovirus; unclassified Timquatrovirus.
DB of origin
NUCCORE
Length
58351
Host Name
Mycobacterium smegmatis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
94
%GC
67.62
Number of singletons
1
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
AVR77327.1 MH051258_p8 portal protein phrog_104 portal protein head and packaging 1 3532 5115
AVR77413.1 MH051258_p73 hypothetical protein singleton unknown function unknown function 1 48215 48445
AVR77375.1 MH051258_p60 hypothetical protein phrog_192 DNA polymerase exonuclease subunit DNA, RNA and nucleotide metabolism 1 40633 41229
AVR77338.1 MH051258_p18 tail assembly chaperone phrog_1326 tail assembly chaperone tail 1 11957 12837
AVR77394.1 MH051258_p82 hypothetical protein phrog_2974 unknown function unknown function 1 52399 52668
AVR77385.1 MH051258_p71 hypothetical protein phrog_1571 HNH endonuclease DNA, RNA and nucleotide metabolism 1 45114 45494
AVR77400.1 MH051258_p89 hypothetical protein phrog_5436 unknown function unknown function 1 54686 55486
AVR77343.1 MH051258_p24 minor tail protein phrog_1565 minor tail protein tail 1 20464 21561
AVR77320.1 MH051258_p1 hypothetical protein phrog_5391 unknown function unknown function 1 116 253
AVR77351.1 MH051258_p35 hypothetical protein phrog_1738 unknown function unknown function 1 29589 29849
AVR77379.1 MH051258_p65 hypothetical protein phrog_12856 unknown function unknown function 1 42608 42889
AVR77363.1 MH051258_p48 hypothetical protein phrog_14099 unknown function unknown function 1 36995 37255
AVR77349.1 MH051258_p33 holin phrog_565 holin lysis 1 28862 29260
AVR77353.1 MH051258_p37 hypothetical protein phrog_1042 unknown function unknown function 1 31023 31310
AVR77329.1 MH051258_p10 hypothetical protein phrog_1757 unknown function unknown function 1 7771 7968
AVR77350.1 MH051258_p34 hypothetical protein phrog_3413 unknown function unknown function 1 29257 29592
AVR77389.1 MH051258_p76 hypothetical protein phrog_12358 unknown function unknown function 1 49321 49911
AVR77360.1 MH051258_p45 hypothetical protein phrog_950 unknown function unknown function -1 35168 35986
AVR77328.1 MH051258_p9 capsid maturation protease phrog_1752 head maturation protease head and packaging 1 5096 7774
AVR77410.1 MH051258_p88 hypothetical protein phrog_11871 unknown function unknown function 1 54254 54607
AVR77396.1 MH051258_p84 hypothetical protein phrog_7536 unknown function unknown function 1 53236 53415
AVR77398.1 MH051258_p86 hypothetical protein phrog_3963 unknown function unknown function 1 53779 54087
AVR77369.1 MH051258_p54 hypothetical protein phrog_2286 unknown function unknown function 1 38683 39375
AVR77321.1 MH051258_p2 hypothetical protein phrog_2074 unknown function unknown function 1 250 480
AVR77382.1 MH051258_p68 hypothetical protein phrog_22 thioredoxin domain DNA, RNA and nucleotide metabolism 1 43849 44112
AVR77330.1 MH051258_p11 scaffolding protein phrog_1793 head scaffolding protein head and packaging 1 8060 8632
AVR77334.1 MH051258_p15 hypothetical protein phrog_387 neck protein connector 1 10480 10740
AVR77367.1 MH051258_p52 hypothetical protein phrog_658 unknown function unknown function 1 38090 38440
AVR77364.1 MH051258_p49 hypothetical protein phrog_2654 unknown function unknown function 1 37299 37481
AVR77325.1 MH051258_p6 hypothetical protein phrog_1459 terminase small subunit head and packaging 1 1831 2103
AVR77352.1 MH051258_p36 hypothetical protein phrog_284 exonuclease DNA, RNA and nucleotide metabolism 1 29836 31026
AVR77409.1 MH051258_p63 hypothetical protein phrog_10545 unknown function unknown function 1 42250 42396
AVR77355.1 MH051258_p39 hypothetical protein phrog_1338 unknown function unknown function 1 31818 32117
AVR77357.1 MH051258_p41 hypothetical protein phrog_3851 unknown function unknown function 1 32409 32798
AVR77387.1 MH051258_p74 hypothetical protein phrog_10480 unknown function unknown function 1 48438 48836
AVR77386.1 MH051258_p72 DNA primase phrog_2478 DNA polymerase/primase DNA, RNA and nucleotide metabolism 1 45586 48207
AVR77406.1 MH051258_p28 hypothetical protein phrog_25391 unknown function unknown function 1 25622 25798
AVR77383.1 MH051258_p69 DNA methylase phrog_67 DNA methyltransferase other 1 44109 44954
AVR77401.1 MH051258_p90 hypothetical protein phrog_2433 unknown function unknown function 1 55551 56258
AVR77326.1 MH051258_p7 terminase phrog_2 terminase large subunit head and packaging 1 2180 3520
AVR77384.1 MH051258_p70 hypothetical protein phrog_12554 unknown function unknown function 1 44954 45124
AVR77404.1 MH051258_p93 HNH endonuclease phrog_338 HNH endonuclease DNA, RNA and nucleotide metabolism 1 57439 57744
AVR77368.1 MH051258_p53 hypothetical protein phrog_1622 unknown function unknown function 1 38440 38679
AVR77337.1 MH051258_p19 tail assembly chaperone phrog_1861 unknown function unknown function 1 11957 12406
AVR77412.1 MH051258_p78 hypothetical protein phrog_12502 unknown function unknown function 1 50811 51017
AVR77333.1 MH051258_p14 hypothetical protein phrog_763 head-tail adaptor connector 1 10137 10493
AVR77407.1 MH051258_p29 hypothetical protein phrog_240 head protein head and packaging 1 25810 26172
AVR77331.1 MH051258_p12 major capsid protein phrog_10 major head protein head and packaging 1 8691 9620
AVR77395.1 MH051258_p83 hypothetical protein phrog_357 transcriptional repressor transcription regulation 1 52699 53205
AVR77371.1 MH051258_p56 hypothetical protein phrog_14062 unknown function unknown function 1 39758 39967
AVR77381.1 MH051258_p67 hypothetical protein phrog_1911 unknown function unknown function 1 43073 43741
AVR77332.1 MH051258_p13 hypothetical protein phrog_137 head-tail adaptor Ad1 connector 1 9760 10134
AVR77374.1 MH051258_p59 hypothetical protein phrog_13940 unknown function unknown function 1 40553 40636
AVR77346.1 MH051258_p30 hypothetical protein phrog_38354 unknown function unknown function 1 26188 26391
AVR77339.1 MH051258_p20 tape measure protein phrog_971 endolysin lysis 1 12840 17027
AVR77397.1 MH051258_p85 hypothetical protein phrog_7647 unknown function unknown function 1 53412 53750
AVR77336.1 MH051258_p17 major tail protein phrog_117 major tail protein tail 1 11243 11854
AVR77347.1 MH051258_p31 lysin A phrog_317 endolysin lysis 1 26422 28032
AVR77342.1 MH051258_p23 minor tail protein phrog_1697 minor tail protein tail 1 19949 20467
AVR77378.1 MH051258_p64 hypothetical protein phrog_1581 unknown function unknown function 1 42393 42611
AVR77380.1 MH051258_p66 hypothetical protein phrog_2388 unknown function unknown function 1 42886 43002
AVR77399.1 MH051258_p87 hypothetical protein phrog_12916 unknown function unknown function 1 54102 54257
AVR77354.1 MH051258_p38 hypothetical protein phrog_2311 HTH DNA binding protein DNA, RNA and nucleotide metabolism 1 31460 31786
AVR77408.1 MH051258_p44 integrase phrog_1 integrase integration and excision 1 33922 35187
AVR77411.1 MH051258_p27 minor tail protein phrog_416 minor tail protein tail 1 24552 25625
AVR77376.1 MH051258_p61 hypothetical protein phrog_1498 unknown function unknown function 1 41229 41393
AVR77393.1 MH051258_p81 hypothetical protein phrog_14347 unknown function unknown function 1 52259 52369
AVR77324.1 MH051258_p5 hypothetical protein phrog_2622 unknown function unknown function 1 1595 1834
AVR77362.1 MH051258_p47 hypothetical protein phrog_66 excisionase and transcriptional regulator integration and excision 1 36805 36990
AVR77388.1 MH051258_p75 endonuclease VII phrog_307 endonuclease VII DNA, RNA and nucleotide metabolism 1 48848 49324
AVR77392.1 MH051258_p80 SprT-like protease phrog_1006 unknown function unknown function 1 51574 52149
AVR77366.1 MH051258_p51 endonuclease phrog_12473 endonuclease DNA, RNA and nucleotide metabolism 1 37786 38097
AVR77391.1 MH051258_p79 hypothetical protein phrog_2493 unknown function unknown function 1 51014 51514
AVR77372.1 MH051258_p57 hypothetical protein phrog_353 toxin moron, auxiliary metabolic gene and host takeover 1 39964 40185
AVR77341.1 MH051258_p22 minor tail protein phrog_110 minor tail protein tail 1 18161 19948
AVR77348.1 MH051258_p32 lysin B phrog_102 endolysin lysis 1 28032 28823
AVR77345.1 MH051258_p26 minor tail protein phrog_346 minor tail protein tail 1 21811 24555
AVR77340.1 MH051258_p21 minor tail protein phrog_106 minor tail protein tail 1 17028 18161
AVR77322.1 MH051258_p3 hypothetical protein phrog_1454 unknown function unknown function 1 521 883
AVR77403.1 MH051258_p92 hypothetical protein phrog_14339 unknown function unknown function 1 57223 57435
AVR77373.1 MH051258_p58 hypothetical protein phrog_1956 unknown function unknown function 1 40278 40553
AVR77335.1 MH051258_p16 hypothetical protein phrog_123 tail terminator connector 1 10737 11162
AVR77359.1 MH051258_p43 hypothetical protein phrog_806 unknown function unknown function -1 33160 33684
AVR77405.1 MH051258_p94 methyltransferase phrog_2675 DNA methyltransferase other 1 57744 58319
AVR77377.1 MH051258_p62 DnaQ-like exonuclease phrog_1674 exonuclease DNA, RNA and nucleotide metabolism 1 41390 42253
AVR77344.1 MH051258_p25 minor tail protein phrog_1736 minor tail protein tail 1 21573 21818
AVR77361.1 MH051258_p46 immunity repressor phrog_1746 transcriptional repressor transcription regulation -1 36070 36429
AVR77365.1 MH051258_p50 hypothetical protein phrog_11977 unknown function unknown function 1 37478 37789
AVR77390.1 MH051258_p77 hypothetical protein phrog_908 unknown function unknown function 1 49936 50814
AVR77370.1 MH051258_p55 hypothetical protein phrog_474 phosphofructokinase other 1 39372 39761
AVR77323.1 MH051258_p4 hypothetical protein phrog_7999 unknown function unknown function 1 883 1569
AVR77358.1 MH051258_p42 hypothetical protein phrog_8324 unknown function unknown function 1 32795 33061
AVR77402.1 MH051258_p91 hypothetical protein phrog_4095 unknown function unknown function 1 56255 57052
AVR77356.1 MH051258_p40 hypothetical protein phrog_7217 unknown function unknown function 1 32114 32416