| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
MH051258 |
Definition |
Mycobacterium phage SamScheppers, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Timquatrovirus; unclassified Timquatrovirus. |
DB of origin |
NUCCORE |
Length |
58351 |
Host Name |
Mycobacterium smegmatis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
94 |
%GC |
67.62 |
Number of singletons |
1 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| AVR77327.1 | MH051258_p8 | portal protein | phrog_104 | portal protein | head and packaging | 1 | 3532 | 5115 |
| AVR77413.1 | MH051258_p73 | hypothetical protein | singleton | unknown function | unknown function | 1 | 48215 | 48445 |
| AVR77375.1 | MH051258_p60 | hypothetical protein | phrog_192 | DNA polymerase exonuclease subunit | DNA, RNA and nucleotide metabolism | 1 | 40633 | 41229 |
| AVR77338.1 | MH051258_p18 | tail assembly chaperone | phrog_1326 | tail assembly chaperone | tail | 1 | 11957 | 12837 |
| AVR77394.1 | MH051258_p82 | hypothetical protein | phrog_2974 | unknown function | unknown function | 1 | 52399 | 52668 |
| AVR77385.1 | MH051258_p71 | hypothetical protein | phrog_1571 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 45114 | 45494 |
| AVR77400.1 | MH051258_p89 | hypothetical protein | phrog_5436 | unknown function | unknown function | 1 | 54686 | 55486 |
| AVR77343.1 | MH051258_p24 | minor tail protein | phrog_1565 | minor tail protein | tail | 1 | 20464 | 21561 |
| AVR77320.1 | MH051258_p1 | hypothetical protein | phrog_5391 | unknown function | unknown function | 1 | 116 | 253 |
| AVR77351.1 | MH051258_p35 | hypothetical protein | phrog_1738 | unknown function | unknown function | 1 | 29589 | 29849 |
| AVR77379.1 | MH051258_p65 | hypothetical protein | phrog_12856 | unknown function | unknown function | 1 | 42608 | 42889 |
| AVR77363.1 | MH051258_p48 | hypothetical protein | phrog_14099 | unknown function | unknown function | 1 | 36995 | 37255 |
| AVR77349.1 | MH051258_p33 | holin | phrog_565 | holin | lysis | 1 | 28862 | 29260 |
| AVR77353.1 | MH051258_p37 | hypothetical protein | phrog_1042 | unknown function | unknown function | 1 | 31023 | 31310 |
| AVR77329.1 | MH051258_p10 | hypothetical protein | phrog_1757 | unknown function | unknown function | 1 | 7771 | 7968 |
| AVR77350.1 | MH051258_p34 | hypothetical protein | phrog_3413 | unknown function | unknown function | 1 | 29257 | 29592 |
| AVR77389.1 | MH051258_p76 | hypothetical protein | phrog_12358 | unknown function | unknown function | 1 | 49321 | 49911 |
| AVR77360.1 | MH051258_p45 | hypothetical protein | phrog_950 | unknown function | unknown function | -1 | 35168 | 35986 |
| AVR77328.1 | MH051258_p9 | capsid maturation protease | phrog_1752 | head maturation protease | head and packaging | 1 | 5096 | 7774 |
| AVR77410.1 | MH051258_p88 | hypothetical protein | phrog_11871 | unknown function | unknown function | 1 | 54254 | 54607 |
| AVR77396.1 | MH051258_p84 | hypothetical protein | phrog_7536 | unknown function | unknown function | 1 | 53236 | 53415 |
| AVR77398.1 | MH051258_p86 | hypothetical protein | phrog_3963 | unknown function | unknown function | 1 | 53779 | 54087 |
| AVR77369.1 | MH051258_p54 | hypothetical protein | phrog_2286 | unknown function | unknown function | 1 | 38683 | 39375 |
| AVR77321.1 | MH051258_p2 | hypothetical protein | phrog_2074 | unknown function | unknown function | 1 | 250 | 480 |
| AVR77382.1 | MH051258_p68 | hypothetical protein | phrog_22 | thioredoxin domain | DNA, RNA and nucleotide metabolism | 1 | 43849 | 44112 |
| AVR77330.1 | MH051258_p11 | scaffolding protein | phrog_1793 | head scaffolding protein | head and packaging | 1 | 8060 | 8632 |
| AVR77334.1 | MH051258_p15 | hypothetical protein | phrog_387 | neck protein | connector | 1 | 10480 | 10740 |
| AVR77367.1 | MH051258_p52 | hypothetical protein | phrog_658 | unknown function | unknown function | 1 | 38090 | 38440 |
| AVR77364.1 | MH051258_p49 | hypothetical protein | phrog_2654 | unknown function | unknown function | 1 | 37299 | 37481 |
| AVR77325.1 | MH051258_p6 | hypothetical protein | phrog_1459 | terminase small subunit | head and packaging | 1 | 1831 | 2103 |
| AVR77352.1 | MH051258_p36 | hypothetical protein | phrog_284 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 29836 | 31026 |
| AVR77409.1 | MH051258_p63 | hypothetical protein | phrog_10545 | unknown function | unknown function | 1 | 42250 | 42396 |
| AVR77355.1 | MH051258_p39 | hypothetical protein | phrog_1338 | unknown function | unknown function | 1 | 31818 | 32117 |
| AVR77357.1 | MH051258_p41 | hypothetical protein | phrog_3851 | unknown function | unknown function | 1 | 32409 | 32798 |
| AVR77387.1 | MH051258_p74 | hypothetical protein | phrog_10480 | unknown function | unknown function | 1 | 48438 | 48836 |
| AVR77386.1 | MH051258_p72 | DNA primase | phrog_2478 | DNA polymerase/primase | DNA, RNA and nucleotide metabolism | 1 | 45586 | 48207 |
| AVR77406.1 | MH051258_p28 | hypothetical protein | phrog_25391 | unknown function | unknown function | 1 | 25622 | 25798 |
| AVR77383.1 | MH051258_p69 | DNA methylase | phrog_67 | DNA methyltransferase | other | 1 | 44109 | 44954 |
| AVR77401.1 | MH051258_p90 | hypothetical protein | phrog_2433 | unknown function | unknown function | 1 | 55551 | 56258 |
| AVR77326.1 | MH051258_p7 | terminase | phrog_2 | terminase large subunit | head and packaging | 1 | 2180 | 3520 |
| AVR77384.1 | MH051258_p70 | hypothetical protein | phrog_12554 | unknown function | unknown function | 1 | 44954 | 45124 |
| AVR77404.1 | MH051258_p93 | HNH endonuclease | phrog_338 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 57439 | 57744 |
| AVR77368.1 | MH051258_p53 | hypothetical protein | phrog_1622 | unknown function | unknown function | 1 | 38440 | 38679 |
| AVR77337.1 | MH051258_p19 | tail assembly chaperone | phrog_1861 | unknown function | unknown function | 1 | 11957 | 12406 |
| AVR77412.1 | MH051258_p78 | hypothetical protein | phrog_12502 | unknown function | unknown function | 1 | 50811 | 51017 |
| AVR77333.1 | MH051258_p14 | hypothetical protein | phrog_763 | head-tail adaptor | connector | 1 | 10137 | 10493 |
| AVR77407.1 | MH051258_p29 | hypothetical protein | phrog_240 | head protein | head and packaging | 1 | 25810 | 26172 |
| AVR77331.1 | MH051258_p12 | major capsid protein | phrog_10 | major head protein | head and packaging | 1 | 8691 | 9620 |
| AVR77395.1 | MH051258_p83 | hypothetical protein | phrog_357 | transcriptional repressor | transcription regulation | 1 | 52699 | 53205 |
| AVR77371.1 | MH051258_p56 | hypothetical protein | phrog_14062 | unknown function | unknown function | 1 | 39758 | 39967 |
| AVR77381.1 | MH051258_p67 | hypothetical protein | phrog_1911 | unknown function | unknown function | 1 | 43073 | 43741 |
| AVR77332.1 | MH051258_p13 | hypothetical protein | phrog_137 | head-tail adaptor Ad1 | connector | 1 | 9760 | 10134 |
| AVR77374.1 | MH051258_p59 | hypothetical protein | phrog_13940 | unknown function | unknown function | 1 | 40553 | 40636 |
| AVR77346.1 | MH051258_p30 | hypothetical protein | phrog_38354 | unknown function | unknown function | 1 | 26188 | 26391 |
| AVR77339.1 | MH051258_p20 | tape measure protein | phrog_971 | endolysin | lysis | 1 | 12840 | 17027 |
| AVR77397.1 | MH051258_p85 | hypothetical protein | phrog_7647 | unknown function | unknown function | 1 | 53412 | 53750 |
| AVR77336.1 | MH051258_p17 | major tail protein | phrog_117 | major tail protein | tail | 1 | 11243 | 11854 |
| AVR77347.1 | MH051258_p31 | lysin A | phrog_317 | endolysin | lysis | 1 | 26422 | 28032 |
| AVR77342.1 | MH051258_p23 | minor tail protein | phrog_1697 | minor tail protein | tail | 1 | 19949 | 20467 |
| AVR77378.1 | MH051258_p64 | hypothetical protein | phrog_1581 | unknown function | unknown function | 1 | 42393 | 42611 |
| AVR77380.1 | MH051258_p66 | hypothetical protein | phrog_2388 | unknown function | unknown function | 1 | 42886 | 43002 |
| AVR77399.1 | MH051258_p87 | hypothetical protein | phrog_12916 | unknown function | unknown function | 1 | 54102 | 54257 |
| AVR77354.1 | MH051258_p38 | hypothetical protein | phrog_2311 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 31460 | 31786 |
| AVR77408.1 | MH051258_p44 | integrase | phrog_1 | integrase | integration and excision | 1 | 33922 | 35187 |
| AVR77411.1 | MH051258_p27 | minor tail protein | phrog_416 | minor tail protein | tail | 1 | 24552 | 25625 |
| AVR77376.1 | MH051258_p61 | hypothetical protein | phrog_1498 | unknown function | unknown function | 1 | 41229 | 41393 |
| AVR77393.1 | MH051258_p81 | hypothetical protein | phrog_14347 | unknown function | unknown function | 1 | 52259 | 52369 |
| AVR77324.1 | MH051258_p5 | hypothetical protein | phrog_2622 | unknown function | unknown function | 1 | 1595 | 1834 |
| AVR77362.1 | MH051258_p47 | hypothetical protein | phrog_66 | excisionase and transcriptional regulator | integration and excision | 1 | 36805 | 36990 |
| AVR77388.1 | MH051258_p75 | endonuclease VII | phrog_307 | endonuclease VII | DNA, RNA and nucleotide metabolism | 1 | 48848 | 49324 |
| AVR77392.1 | MH051258_p80 | SprT-like protease | phrog_1006 | unknown function | unknown function | 1 | 51574 | 52149 |
| AVR77366.1 | MH051258_p51 | endonuclease | phrog_12473 | endonuclease | DNA, RNA and nucleotide metabolism | 1 | 37786 | 38097 |
| AVR77391.1 | MH051258_p79 | hypothetical protein | phrog_2493 | unknown function | unknown function | 1 | 51014 | 51514 |
| AVR77372.1 | MH051258_p57 | hypothetical protein | phrog_353 | toxin | moron, auxiliary metabolic gene and host takeover | 1 | 39964 | 40185 |
| AVR77341.1 | MH051258_p22 | minor tail protein | phrog_110 | minor tail protein | tail | 1 | 18161 | 19948 |
| AVR77348.1 | MH051258_p32 | lysin B | phrog_102 | endolysin | lysis | 1 | 28032 | 28823 |
| AVR77345.1 | MH051258_p26 | minor tail protein | phrog_346 | minor tail protein | tail | 1 | 21811 | 24555 |
| AVR77340.1 | MH051258_p21 | minor tail protein | phrog_106 | minor tail protein | tail | 1 | 17028 | 18161 |
| AVR77322.1 | MH051258_p3 | hypothetical protein | phrog_1454 | unknown function | unknown function | 1 | 521 | 883 |
| AVR77403.1 | MH051258_p92 | hypothetical protein | phrog_14339 | unknown function | unknown function | 1 | 57223 | 57435 |
| AVR77373.1 | MH051258_p58 | hypothetical protein | phrog_1956 | unknown function | unknown function | 1 | 40278 | 40553 |
| AVR77335.1 | MH051258_p16 | hypothetical protein | phrog_123 | tail terminator | connector | 1 | 10737 | 11162 |
| AVR77359.1 | MH051258_p43 | hypothetical protein | phrog_806 | unknown function | unknown function | -1 | 33160 | 33684 |
| AVR77405.1 | MH051258_p94 | methyltransferase | phrog_2675 | DNA methyltransferase | other | 1 | 57744 | 58319 |
| AVR77377.1 | MH051258_p62 | DnaQ-like exonuclease | phrog_1674 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 41390 | 42253 |
| AVR77344.1 | MH051258_p25 | minor tail protein | phrog_1736 | minor tail protein | tail | 1 | 21573 | 21818 |
| AVR77361.1 | MH051258_p46 | immunity repressor | phrog_1746 | transcriptional repressor | transcription regulation | -1 | 36070 | 36429 |
| AVR77365.1 | MH051258_p50 | hypothetical protein | phrog_11977 | unknown function | unknown function | 1 | 37478 | 37789 |
| AVR77390.1 | MH051258_p77 | hypothetical protein | phrog_908 | unknown function | unknown function | 1 | 49936 | 50814 |
| AVR77370.1 | MH051258_p55 | hypothetical protein | phrog_474 | phosphofructokinase | other | 1 | 39372 | 39761 |
| AVR77323.1 | MH051258_p4 | hypothetical protein | phrog_7999 | unknown function | unknown function | 1 | 883 | 1569 |
| AVR77358.1 | MH051258_p42 | hypothetical protein | phrog_8324 | unknown function | unknown function | 1 | 32795 | 33061 |
| AVR77402.1 | MH051258_p91 | hypothetical protein | phrog_4095 | unknown function | unknown function | 1 | 56255 | 57052 |
| AVR77356.1 | MH051258_p40 | hypothetical protein | phrog_7217 | unknown function | unknown function | 1 | 32114 | 32416 |