| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
MH051265 |
Definition |
Mycobacterium phage Yahalom, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Bclasvirinae; Pipefishvirus; unclassified Pipefishvirus. |
DB of origin |
NUCCORE |
Length |
68482 |
Host Name |
Mycobacterium smegmatis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
101 |
%GC |
67.43 |
Number of singletons |
0 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| AVR56002.1 | MH051265_p95 | hypothetical protein | phrog_1221 | unknown function | unknown function | -1 | 65657 | 66769 |
| AVR56000.1 | MH051265_p92 | hypothetical protein | phrog_6114 | unknown function | unknown function | -1 | 64354 | 64533 |
| AVR56017.1 | MH051265_p72 | hypothetical protein | phrog_1306 | unknown function | unknown function | -1 | 59013 | 59183 |
| AVR55940.1 | MH051265_p19 | hypothetical protein | phrog_2344 | unknown function | unknown function | 1 | 15473 | 15952 |
| AVR56004.1 | MH051265_p97 | hypothetical protein | phrog_4825 | unknown function | unknown function | 1 | 67257 | 67430 |
| AVR55930.1 | MH051265_p9 | hypothetical protein | phrog_6276 | unknown function | unknown function | -1 | 5549 | 5845 |
| AVR55923.1 | MH051265_p2 | hypothetical protein | phrog_6919 | unknown function | unknown function | 1 | 690 | 854 |
| AVR56005.1 | MH051265_p98 | hypothetical protein | phrog_5733 | unknown function | unknown function | 1 | 67442 | 67687 |
| AVR55993.1 | MH051265_p84 | hypothetical protein | phrog_7541 | unknown function | unknown function | -1 | 62004 | 62336 |
| AVR56021.1 | MH051265_p87 | hypothetical protein | phrog_2089 | unknown function | unknown function | -1 | 62899 | 63111 |
| AVR55934.1 | MH051265_p13 | hypothetical protein | phrog_25906 | unknown function | unknown function | 1 | 10734 | 10865 |
| AVR55938.1 | MH051265_p17 | hypothetical protein | phrog_565 | holin | lysis | 1 | 14578 | 15012 |
| AVR55958.1 | MH051265_p38 | minor tail protein | phrog_3329 | unknown function | unknown function | 1 | 35536 | 36885 |
| AVR55924.1 | MH051265_p3 | hypothetical protein | phrog_6307 | unknown function | unknown function | 1 | 851 | 1072 |
| AVR55966.1 | MH051265_p47 | lysin B | phrog_102 | endolysin | lysis | 1 | 41547 | 42611 |
| AVR55922.1 | MH051265_p1 | hypothetical protein | phrog_723 | ParB-like partition protein | DNA, RNA and nucleotide metabolism | 1 | 73 | 693 |
| AVR55995.1 | MH051265_p86 | hypothetical protein | phrog_7490 | unknown function | unknown function | -1 | 62617 | 62805 |
| AVR55943.1 | MH051265_p23 | hypothetical protein | phrog_783 | head-tail adaptor | connector | 1 | 17749 | 18489 |
| AVR55959.1 | MH051265_p39 | hypothetical protein | phrog_915 | unknown function | unknown function | 1 | 36908 | 37276 |
| AVR55954.1 | MH051265_p34 | hypothetical protein | phrog_240 | head protein | head and packaging | 1 | 33462 | 33845 |
| AVR55956.1 | MH051265_p36 | hypothetical protein | phrog_282 | unknown function | unknown function | 1 | 34290 | 34943 |
| AVR55947.1 | MH051265_p27 | hypothetical protein | phrog_1118 | tail assembly chaperone | tail | 1 | 19789 | 20382 |
| AVR55967.1 | MH051265_p48 | hypothetical protein | phrog_870 | unknown function | unknown function | -1 | 42681 | 43226 |
| AVR56012.1 | MH051265_p52 | hypothetical protein | phrog_6400 | unknown function | unknown function | -1 | 47263 | 47625 |
| AVR55974.1 | MH051265_p58 | hypothetical protein | phrog_6482 | unknown function | unknown function | -1 | 53658 | 53927 |
| AVR55960.1 | MH051265_p40 | hypothetical protein | phrog_941 | unknown function | unknown function | 1 | 37273 | 37596 |
| AVR55931.1 | MH051265_p10 | hypothetical protein | phrog_781 | unknown function | unknown function | 1 | 5950 | 6285 |
| AVR55953.1 | MH051265_p33 | minor tail protein | phrog_416 | minor tail protein | tail | 1 | 32232 | 33434 |
| AVR55994.1 | MH051265_p85 | hypothetical protein | phrog_7414 | unknown function | unknown function | -1 | 62333 | 62620 |
| AVR55999.1 | MH051265_p91 | hypothetical protein | phrog_5411 | HNH endonuclease | DNA, RNA and nucleotide metabolism | -1 | 63974 | 64357 |
| AVR55941.1 | MH051265_p20 | hypothetical protein | phrog_2525 | unknown function | unknown function | 1 | 15949 | 16281 |
| AVR55979.1 | MH051265_p63 | hypothetical protein | phrog_6105 | unknown function | unknown function | -1 | 55196 | 55546 |
| AVR55996.1 | MH051265_p88 | hypothetical protein | phrog_5355 | unknown function | unknown function | -1 | 63108 | 63263 |
| AVR56001.1 | MH051265_p94 | hypothetical protein | phrog_1010 | unknown function | unknown function | -1 | 65095 | 65583 |
| AVR56011.1 | MH051265_p50 | hypothetical protein | phrog_36161 | unknown function | unknown function | -1 | 44889 | 45332 |
| AVR55936.1 | MH051265_p15 | hypothetical protein | phrog_779 | unknown function | unknown function | 1 | 13152 | 13961 |
| AVR55945.1 | MH051265_p25 | hypothetical protein | phrog_901 | unknown function | unknown function | 1 | 19018 | 19392 |
| AVR55968.1 | MH051265_p49 | hypothetical protein | phrog_466 | exonuclease | DNA, RNA and nucleotide metabolism | -1 | 43276 | 44898 |
| AVR55969.1 | MH051265_p51 | DNA helicase | phrog_16 | DNA helicase | DNA, RNA and nucleotide metabolism | -1 | 45472 | 47169 |
| AVR56014.1 | MH051265_p65 | hypothetical protein | phrog_996 | unknown function | unknown function | 1 | 56292 | 57059 |
| AVR55976.1 | MH051265_p60 | hypothetical protein | phrog_993 | unknown function | unknown function | -1 | 54364 | 54813 |
| AVR55991.1 | MH051265_p82 | hypothetical protein | phrog_6338 | unknown function | unknown function | -1 | 61500 | 61658 |
| AVR55990.1 | MH051265_p81 | hypothetical protein | phrog_6460 | unknown function | unknown function | -1 | 61333 | 61503 |
| AVR55997.1 | MH051265_p89 | hypothetical protein | phrog_6199 | unknown function | unknown function | -1 | 63338 | 63721 |
| AVR56003.1 | MH051265_p96 | hypothetical protein | phrog_2972 | unknown function | unknown function | -1 | 66843 | 67079 |
| AVR55928.1 | MH051265_p7 | hypothetical protein | phrog_6317 | unknown function | unknown function | -1 | 4615 | 4866 |
| AVR55971.1 | MH051265_p55 | DNA recombinase | phrog_906 | DNA polymerase/primase | DNA, RNA and nucleotide metabolism | -1 | 48467 | 51070 |
| AVR55987.1 | MH051265_p75 | hypothetical protein | phrog_928 | unknown function | unknown function | 1 | 59694 | 60221 |
| AVR55932.1 | MH051265_p11 | portal protein | phrog_776 | portal protein | head and packaging | 1 | 6315 | 8219 |
| AVR56022.1 | MH051265_p93 | hypothetical protein | phrog_6469 | unknown function | unknown function | -1 | 64530 | 64997 |
| AVR56010.1 | MH051265_p44 | HTH DNA binding protein | phrog_955 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 39038 | 39523 |
| AVR55981.1 | MH051265_p67 | hypothetical protein | phrog_6404 | unknown function | unknown function | 1 | 57340 | 57570 |
| AVR56009.1 | MH051265_p22 | hypothetical protein | phrog_6514 | unknown function | unknown function | -1 | 17508 | 17618 |
| AVR55955.1 | MH051265_p35 | hypothetical protein | phrog_948 | unknown function | unknown function | 1 | 33854 | 34279 |
| AVR55937.1 | MH051265_p16 | hypothetical protein | phrog_970 | unknown function | unknown function | 1 | 13976 | 14581 |
| AVR55939.1 | MH051265_p18 | hypothetical protein | phrog_2272 | unknown function | unknown function | 1 | 15015 | 15476 |
| AVR55962.1 | MH051265_p42 | hypothetical protein | phrog_2804 | virion structural protein | head and packaging | 1 | 38024 | 38749 |
| AVR55933.1 | MH051265_p12 | capsid morphogenesis protein | phrog_859 | portal protein | head and packaging | 1 | 8209 | 10656 |
| AVR55972.1 | MH051265_p56 | hypothetical protein | phrog_6342 | unknown function | unknown function | -1 | 51104 | 51844 |
| AVR56006.1 | MH051265_p99 | hypothetical protein | phrog_6097 | unknown function | unknown function | 1 | 67684 | 67920 |
| AVR55980.1 | MH051265_p64 | hypothetical protein | phrog_982 | unknown function | unknown function | -1 | 55623 | 55892 |
| AVR55984.1 | MH051265_p71 | hypothetical protein | phrog_4885 | unknown function | unknown function | 1 | 58743 | 59000 |
| AVR55970.1 | MH051265_p54 | hypothetical protein | phrog_1371 | unknown function | unknown function | -1 | 47951 | 48424 |
| AVR56016.1 | MH051265_p70 | hypothetical protein | phrog_1031 | unknown function | unknown function | 1 | 58332 | 58736 |
| AVR56019.1 | MH051265_p77 | hypothetical protein | phrog_6691 | unknown function | unknown function | -1 | 60477 | 60758 |
| AVR55951.1 | MH051265_p31 | minor tail protein | phrog_746 | minor tail protein | tail | 1 | 28626 | 30851 |
| AVR55950.1 | MH051265_p30 | minor tail protein | phrog_837 | minor tail protein | tail | 1 | 27586 | 28629 |
| AVR55948.1 | MH051265_p28 | tape measure protein | phrog_934 | tail length tape measure protein | tail | 1 | 20408 | 26149 |
| AVR55965.1 | MH051265_p46 | lysin A | phrog_700 | endolysin | lysis | 1 | 40281 | 41546 |
| AVR56007.1 | MH051265_p100 | hypothetical protein | phrog_6432 | unknown function | unknown function | 1 | 67911 | 68066 |
| AVR55963.1 | MH051265_p43 | hypothetical protein | phrog_597 | DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 38805 | 39041 |
| AVR55925.1 | MH051265_p4 | PAPS reductase | phrog_2302 | phosphoadenosine phosphosulfate reductase | moron, auxiliary metabolic gene and host takeover | 1 | 1069 | 2151 |
| AVR55929.1 | MH051265_p8 | RuvC-like resolvase | phrog_159 | RuvC-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | -1 | 4863 | 5486 |
| AVR55978.1 | MH051265_p62 | hypothetical protein | phrog_6656 | unknown function | unknown function | -1 | 54969 | 55199 |
| AVR55957.1 | MH051265_p37 | hypothetical protein | phrog_282 | unknown function | unknown function | 1 | 34940 | 35539 |
| AVR55973.1 | MH051265_p57 | DNA polymerase I | phrog_17 | DNA polymerase | DNA, RNA and nucleotide metabolism | -1 | 51841 | 53658 |
| AVR55944.1 | MH051265_p24 | hypothetical protein | phrog_810 | unknown function | unknown function | 1 | 18486 | 19007 |
| AVR55998.1 | MH051265_p90 | hypothetical protein | phrog_6428 | unknown function | unknown function | -1 | 63762 | 63977 |
| AVR55982.1 | MH051265_p68 | hypothetical protein | phrog_4938 | unknown function | unknown function | 1 | 57567 | 57731 |
| AVR55942.1 | MH051265_p21 | major tail protein | phrog_792 | major tail protein | tail | 1 | 16369 | 17448 |
| AVR55977.1 | MH051265_p61 | hypothetical protein | phrog_6735 | unknown function | unknown function | -1 | 54813 | 54932 |
| AVR55988.1 | MH051265_p79 | hypothetical protein | phrog_4461 | unknown function | unknown function | -1 | 61077 | 61175 |
| AVR55983.1 | MH051265_p69 | hypothetical protein | phrog_645 | Rnase E | DNA, RNA and nucleotide metabolism | 1 | 57728 | 58327 |
| AVR55946.1 | MH051265_p26 | hypothetical protein | phrog_5 | tail completion or Neck1 protein | connector | 1 | 19376 | 19789 |
| AVR56013.1 | MH051265_p53 | hypothetical protein | phrog_3892 | unknown function | unknown function | -1 | 47625 | 47954 |
| AVR55952.1 | MH051265_p32 | minor tail protein | phrog_356 | minor tail protein | tail | 1 | 30853 | 32235 |
| AVR55961.1 | MH051265_p41 | hypothetical protein | phrog_892 | tail fiber protein | tail | 1 | 37614 | 38024 |
| AVR56020.1 | MH051265_p78 | HNH endonuclease | phrog_960 | HNH endonuclease | DNA, RNA and nucleotide metabolism | -1 | 60755 | 61084 |
| AVR55986.1 | MH051265_p74 | hypothetical protein | phrog_6229 | unknown function | unknown function | 1 | 59365 | 59712 |
| AVR55935.1 | MH051265_p14 | major capsid protein | phrog_777 | major head protein | head and packaging | 1 | 11038 | 13053 |
| AVR56015.1 | MH051265_p66 | hypothetical protein | phrog_1016 | unknown function | unknown function | 1 | 57095 | 57343 |
| AVR55985.1 | MH051265_p73 | hypothetical protein | phrog_6511 | unknown function | unknown function | 1 | 59202 | 59354 |
| AVR55949.1 | MH051265_p29 | minor tail protein | phrog_838 | unknown function | unknown function | 1 | 26159 | 27589 |
| AVR55964.1 | MH051265_p45 | hypothetical protein | phrog_636 | unknown function | unknown function | -1 | 39520 | 40218 |
| AVR56018.1 | MH051265_p76 | hypothetical protein | phrog_4974 | unknown function | unknown function | -1 | 60234 | 60422 |
| AVR55992.1 | MH051265_p83 | hypothetical protein | phrog_4392 | unknown function | unknown function | -1 | 61651 | 62004 |
| AVR55927.1 | MH051265_p6 | terminase large subunit | phrog_38 | terminase large subunit | head and packaging | 1 | 2714 | 4474 |
| AVR56008.1 | MH051265_p101 | hypothetical protein | phrog_5930 | unknown function | unknown function | 1 | 68131 | 68433 |
| AVR55975.1 | MH051265_p59 | hypothetical protein | phrog_3025 | unknown function | unknown function | -1 | 53924 | 54367 |
| AVR55926.1 | MH051265_p5 | ParB-like nuclease protein | phrog_2159 | ParB-like partition protein | DNA, RNA and nucleotide metabolism | 1 | 2148 | 2717 |
| AVR55989.1 | MH051265_p80 | hypothetical protein | phrog_6304 | unknown function | unknown function | -1 | 61172 | 61336 |