| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
MH102284 |
Definition |
Salmonella phage vB_SenS_PHB07, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Drexlerviridae; Tempevirinae; Tlsvirus; Salmonella virus PHB07. |
DB of origin |
NUCCORE |
Length |
51818 |
Host Name |
Salmonella sp. |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
87 |
%GC |
43.35 |
Number of singletons |
3 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| AVQ09800.1 | MH102284_p50 | portal protein | phrog_146 | portal protein | head and packaging | -1 | 36767 | 38062 |
| AVQ09797.1 | MH102284_p47 | zonula occludens toxin | phrog_1989 | unknown function | unknown function | -1 | 34507 | 34980 |
| AVQ09798.1 | MH102284_p48 | capsid and scaffold protein | phrog_530 | head maturation protease | head and packaging | -1 | 34993 | 36102 |
| AVQ09778.1 | MH102284_p28 | recombinase | phrog_155 | Erf-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | -1 | 17366 | 18028 |
| AVQ09756.1 | MH102284_p6 | hypothetical protein | phrog_2373 | DNA helicase | DNA, RNA and nucleotide metabolism | 1 | 2196 | 3776 |
| AVQ09769.1 | MH102284_p19 | DNA helicase | phrog_16 | DNA helicase | DNA, RNA and nucleotide metabolism | -1 | 8937 | 10910 |
| AVQ09805.1 | MH102284_p55 | hypothetical protein | phrog_6666 | unknown function | unknown function | -1 | 40707 | 40868 |
| AVQ09782.1 | MH102284_p32 | tail assembly protein | phrog_32 | tail assembly protein | tail | -1 | 23821 | 24420 |
| AVQ09818.1 | MH102284_p68 | hypothetical protein | phrog_16293 | unknown function | unknown function | -1 | 44389 | 44571 |
| AVQ09760.1 | MH102284_p10 | lysin | phrog_7 | endolysin | lysis | -1 | 4692 | 5186 |
| AVQ09772.1 | MH102284_p22 | tail fibers protein | phrog_1591 | tail fiber protein | tail | 1 | 12747 | 14885 |
| AVQ09784.1 | MH102284_p34 | minor tail protein | phrog_18 | minor tail protein | tail | -1 | 25132 | 25890 |
| AVQ09831.1 | MH102284_p81 | hypothetical protein | phrog_5579 | unknown function | unknown function | 1 | 50161 | 50310 |
| AVQ09774.1 | MH102284_p24 | hypothetical protein | phrog_9157 | unknown function | unknown function | 1 | 15800 | 16135 |
| AVQ09771.1 | MH102284_p21 | DNA primase/helicase | phrog_510 | DNA primase | DNA, RNA and nucleotide metabolism | 1 | 11666 | 12592 |
| AVQ09810.1 | MH102284_p60 | hypothetical protein | phrog_11097 | unknown function | unknown function | -1 | 41783 | 42079 |
| AVQ09811.1 | MH102284_p61 | hypothetical protein | phrog_5684 | unknown function | unknown function | -1 | 42076 | 42288 |
| AVQ09765.1 | MH102284_p15 | hypothetical protein | phrog_2676 | unknown function | unknown function | -1 | 7200 | 7436 |
| AVQ09815.1 | MH102284_p65 | hypothetical protein | phrog_9122 | unknown function | unknown function | -1 | 43315 | 43509 |
| AVQ09790.1 | MH102284_p40 | tail protein | phrog_179 | tail terminator | connector | -1 | 30638 | 31030 |
| AVQ09794.1 | MH102284_p44 | hypothetical protein | phrog_2716 | unknown function | unknown function | -1 | 32272 | 32547 |
| AVQ09808.1 | MH102284_p58 | hypothetical protein | phrog_1312 | unknown function | unknown function | -1 | 41272 | 41400 |
| AVQ09777.1 | MH102284_p27 | single-stranded DNA-binding protein | phrog_44 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 16899 | 17327 |
| AVQ09786.1 | MH102284_p36 | tail length tape-measure protein 1 | phrog_24 | tail length tape measure protein | tail | -1 | 26305 | 29214 |
| AVQ09788.1 | MH102284_p38 | tape measure chaperone protein | phrog_569 | tail length tape measure protein | tail | -1 | 29569 | 29883 |
| AVQ09783.1 | MH102284_p33 | minor tail protein | phrog_30 | minor tail protein | tail | -1 | 24413 | 25135 |
| AVQ09807.1 | MH102284_p57 | hypothetical protein | phrog_303 | unknown function | unknown function | -1 | 41043 | 41270 |
| AVQ09785.1 | MH102284_p35 | tail tip assembly protein | phrog_14 | minor tail protein | tail | -1 | 25958 | 26305 |
| AVQ09816.1 | MH102284_p66 | hypothetical protein | phrog_25318 | unknown function | unknown function | -1 | 43512 | 43742 |
| AVQ09776.1 | MH102284_p26 | hypothetical protein | phrog_7239 | unknown function | unknown function | 1 | 16630 | 16887 |
| AVQ09813.1 | MH102284_p63 | hypothetical protein | singleton | unknown function | unknown function | -1 | 42954 | 43139 |
| AVQ09814.1 | MH102284_p64 | hypothetical protein | phrog_14912 | unknown function | unknown function | -1 | 43136 | 43318 |
| AVQ09809.1 | MH102284_p59 | hypothetical protein | phrog_11192 | unknown function | unknown function | -1 | 41457 | 41786 |
| AVQ09802.1 | MH102284_p52 | terminase small subunit | phrog_606 | terminase small subunit | head and packaging | -1 | 39699 | 40223 |
| AVQ09789.1 | MH102284_p39 | tail fibers protein | phrog_584 | major tail protein | tail | -1 | 29961 | 30623 |
| AVQ09775.1 | MH102284_p25 | hypothetical protein | phrog_8329 | unknown function | unknown function | 1 | 16149 | 16643 |
| AVQ09830.1 | MH102284_p80 | hypothetical protein | phrog_1972 | unknown function | unknown function | 1 | 49877 | 50164 |
| AVQ09754.1 | MH102284_p4 | hypothetical protein | phrog_2684 | unknown function | unknown function | 1 | 1401 | 1883 |
| AVQ09768.1 | MH102284_p18 | endonuclease | phrog_824 | unknown function | unknown function | -1 | 8527 | 8934 |
| AVQ09773.1 | MH102284_p23 | hypothetical protein | phrog_9288 | unknown function | unknown function | 1 | 15044 | 15757 |
| AVQ09796.1 | MH102284_p46 | scaffolding protein | phrog_1989 | unknown function | unknown function | -1 | 33660 | 34445 |
| AVQ09767.1 | MH102284_p17 | hypothetical protein | phrog_7420 | unknown function | unknown function | -1 | 8177 | 8455 |
| AVQ09791.1 | MH102284_p41 | hypothetical protein | phrog_169 | tail completion or Neck1 protein | connector | -1 | 31020 | 31460 |
| AVQ09823.1 | MH102284_p73 | hypothetical protein | phrog_7116 | unknown function | unknown function | -1 | 46301 | 46855 |
| AVQ09825.1 | MH102284_p75 | hypothetical protein | phrog_18849 | unknown function | unknown function | -1 | 47509 | 47742 |
| AVQ09817.1 | MH102284_p67 | hypothetical protein | phrog_139 | deoxynucleoside monophosphate kinase | other | -1 | 43821 | 44396 |
| AVQ09801.1 | MH102284_p51 | terminase large subunit | phrog_38 | terminase large subunit | head and packaging | -1 | 38116 | 39687 |
| AVQ09770.1 | MH102284_p20 | transcriptional regulator | phrog_2856 | transcriptional regulator | transcription regulation | 1 | 10999 | 11607 |
| AVQ09761.1 | MH102284_p11 | holin | phrog_2877 | holin | lysis | -1 | 5199 | 5414 |
| AVQ09751.1 | MH102284_p1 | hypothetical protein | phrog_4344 | unknown function | unknown function | 1 | 172 | 393 |
| AVQ09832.1 | MH102284_p82 | hypothetical protein | phrog_7421 | unknown function | unknown function | 1 | 50381 | 50605 |
| AVQ09837.1 | MH102284_p87 | hypothetical protein | phrog_5016 | unknown function | unknown function | 1 | 51516 | 51767 |
| AVQ09766.1 | MH102284_p16 | DNA adenine methyltransferase | phrog_111 | DNA methyltransferase | other | -1 | 7438 | 8175 |
| AVQ09753.1 | MH102284_p3 | Dcm | phrog_757 | DNA methyltransferase | other | 1 | 727 | 1422 |
| AVQ09819.1 | MH102284_p69 | hypothetical protein | phrog_30280 | unknown function | unknown function | -1 | 44568 | 44822 |
| AVQ09829.1 | MH102284_p79 | hypothetical protein | phrog_4653 | unknown function | unknown function | 1 | 49735 | 49893 |
| AVQ09781.1 | MH102284_p31 | tail fiber protein | phrog_31 | central tail fiber J | tail | -1 | 19960 | 23739 |
| AVQ09792.1 | MH102284_p42 | hypothetical protein | phrog_161 | head closure Hc1 | connector | -1 | 31453 | 31824 |
| AVQ09787.1 | MH102284_p37 | hypothetical protein | phrog_680 | tail length tape measure protein | tail | -1 | 29252 | 29521 |
| AVQ09752.1 | MH102284_p2 | hypothetical protein | phrog_9323 | unknown function | unknown function | 1 | 395 | 619 |
| AVQ09804.1 | MH102284_p54 | hypothetical protein | phrog_2919 | unknown function | unknown function | -1 | 40541 | 40723 |
| AVQ09799.1 | MH102284_p49 | head morphogenesis protein | phrog_324 | head morphogenesis | head and packaging | -1 | 36099 | 36770 |
| AVQ09758.1 | MH102284_p8 | hypothetical protein | phrog_9539 | unknown function | unknown function | 1 | 4155 | 4289 |
| AVQ09827.1 | MH102284_p77 | hypothetical protein | phrog_4841 | unknown function | unknown function | -1 | 48032 | 48490 |
| AVQ09820.1 | MH102284_p70 | hypothetical protein | phrog_14011 | unknown function | unknown function | -1 | 44900 | 45088 |
| AVQ09779.1 | MH102284_p29 | tail length tape-measure protein | phrog_11265 | tail length tape measure protein | tail | -1 | 18075 | 18365 |
| AVQ09803.1 | MH102284_p53 | hypothetical protein | phrog_5976 | unknown function | unknown function | -1 | 40311 | 40541 |
| AVQ09835.1 | MH102284_p85 | hypothetical protein | singleton | unknown function | unknown function | 1 | 51029 | 51214 |
| AVQ09822.1 | MH102284_p72 | hypothetical protein | phrog_8382 | unknown function | unknown function | -1 | 45917 | 46240 |
| AVQ09759.1 | MH102284_p9 | hypothetical protein | phrog_1804 | Rz-like spanin | lysis | -1 | 4306 | 4695 |
| AVQ09812.1 | MH102284_p62 | GntR-family transcriptional regulator | phrog_13504 | unknown function | unknown function | -1 | 42348 | 42881 |
| AVQ09793.1 | MH102284_p43 | hypothetical protein | phrog_302 | virion structural protein | head and packaging | -1 | 31821 | 32225 |
| AVQ09836.1 | MH102284_p86 | hypothetical protein | phrog_11701 | unknown function | unknown function | 1 | 51286 | 51534 |
| AVQ09755.1 | MH102284_p5 | hypothetical protein | phrog_12725 | unknown function | unknown function | 1 | 1880 | 2128 |
| AVQ09826.1 | MH102284_p76 | hypothetical protein | phrog_38282 | unknown function | unknown function | -1 | 47748 | 48029 |
| AVQ09795.1 | MH102284_p45 | hypothetical protein | phrog_264 | major head protein | head and packaging | -1 | 32609 | 33583 |
| AVQ09806.1 | MH102284_p56 | hypothetical protein | singleton | unknown function | unknown function | 1 | 40884 | 41009 |
| AVQ09833.1 | MH102284_p83 | hypothetical protein | phrog_14152 | unknown function | unknown function | 1 | 50602 | 50838 |
| AVQ09764.1 | MH102284_p14 | hypothetical protein | phrog_2180 | unknown function | unknown function | -1 | 6959 | 7123 |
| AVQ09828.1 | MH102284_p78 | hypothetical protein | phrog_21159 | unknown function | unknown function | 1 | 49225 | 49659 |
| AVQ09757.1 | MH102284_p7 | hypothetical protein | phrog_2794 | unknown function | unknown function | 1 | 3779 | 4171 |
| AVQ09780.1 | MH102284_p30 | exodeoxyribonuclease VIII | phrog_412 | exonuclease VIII | DNA, RNA and nucleotide metabolism | -1 | 18443 | 19498 |
| AVQ09834.1 | MH102284_p84 | hypothetical protein | phrog_6503 | unknown function | unknown function | 1 | 50835 | 51029 |
| AVQ09763.1 | MH102284_p13 | hypothetical protein | phrog_2817 | unknown function | unknown function | -1 | 6736 | 6978 |
| AVQ09821.1 | MH102284_p71 | 3'-phosphatase, 5'-polynucleotide kinase | phrog_415 | polynucleotide kinase | other | -1 | 45173 | 45733 |
| AVQ09824.1 | MH102284_p74 | hypothetical protein | phrog_13854 | unknown function | unknown function | -1 | 47009 | 47269 |
| AVQ09762.1 | MH102284_p12 | phosphoesterase | phrog_704 | DNA repair exonuclease | DNA, RNA and nucleotide metabolism | -1 | 5527 | 6642 |