Genomic map of Salmonella phage vB_SenS_PHB07 (MH102284)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
MH102284
Definition
Salmonella phage vB_SenS_PHB07, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Drexlerviridae; Tempevirinae; Tlsvirus; Salmonella virus PHB07.
DB of origin
NUCCORE
Length
51818
Host Name
Salmonella sp.
Host domain
Bacteria
Is prophage?
undef
Number of proteins
87
%GC
43.35
Number of singletons
3
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
AVQ09800.1 MH102284_p50 portal protein phrog_146 portal protein head and packaging -1 36767 38062
AVQ09797.1 MH102284_p47 zonula occludens toxin phrog_1989 unknown function unknown function -1 34507 34980
AVQ09798.1 MH102284_p48 capsid and scaffold protein phrog_530 head maturation protease head and packaging -1 34993 36102
AVQ09778.1 MH102284_p28 recombinase phrog_155 Erf-like ssDNA annealing protein DNA, RNA and nucleotide metabolism -1 17366 18028
AVQ09756.1 MH102284_p6 hypothetical protein phrog_2373 DNA helicase DNA, RNA and nucleotide metabolism 1 2196 3776
AVQ09769.1 MH102284_p19 DNA helicase phrog_16 DNA helicase DNA, RNA and nucleotide metabolism -1 8937 10910
AVQ09805.1 MH102284_p55 hypothetical protein phrog_6666 unknown function unknown function -1 40707 40868
AVQ09782.1 MH102284_p32 tail assembly protein phrog_32 tail assembly protein tail -1 23821 24420
AVQ09818.1 MH102284_p68 hypothetical protein phrog_16293 unknown function unknown function -1 44389 44571
AVQ09760.1 MH102284_p10 lysin phrog_7 endolysin lysis -1 4692 5186
AVQ09772.1 MH102284_p22 tail fibers protein phrog_1591 tail fiber protein tail 1 12747 14885
AVQ09784.1 MH102284_p34 minor tail protein phrog_18 minor tail protein tail -1 25132 25890
AVQ09831.1 MH102284_p81 hypothetical protein phrog_5579 unknown function unknown function 1 50161 50310
AVQ09774.1 MH102284_p24 hypothetical protein phrog_9157 unknown function unknown function 1 15800 16135
AVQ09771.1 MH102284_p21 DNA primase/helicase phrog_510 DNA primase DNA, RNA and nucleotide metabolism 1 11666 12592
AVQ09810.1 MH102284_p60 hypothetical protein phrog_11097 unknown function unknown function -1 41783 42079
AVQ09811.1 MH102284_p61 hypothetical protein phrog_5684 unknown function unknown function -1 42076 42288
AVQ09765.1 MH102284_p15 hypothetical protein phrog_2676 unknown function unknown function -1 7200 7436
AVQ09815.1 MH102284_p65 hypothetical protein phrog_9122 unknown function unknown function -1 43315 43509
AVQ09790.1 MH102284_p40 tail protein phrog_179 tail terminator connector -1 30638 31030
AVQ09794.1 MH102284_p44 hypothetical protein phrog_2716 unknown function unknown function -1 32272 32547
AVQ09808.1 MH102284_p58 hypothetical protein phrog_1312 unknown function unknown function -1 41272 41400
AVQ09777.1 MH102284_p27 single-stranded DNA-binding protein phrog_44 single strand DNA binding protein DNA, RNA and nucleotide metabolism -1 16899 17327
AVQ09786.1 MH102284_p36 tail length tape-measure protein 1 phrog_24 tail length tape measure protein tail -1 26305 29214
AVQ09788.1 MH102284_p38 tape measure chaperone protein phrog_569 tail length tape measure protein tail -1 29569 29883
AVQ09783.1 MH102284_p33 minor tail protein phrog_30 minor tail protein tail -1 24413 25135
AVQ09807.1 MH102284_p57 hypothetical protein phrog_303 unknown function unknown function -1 41043 41270
AVQ09785.1 MH102284_p35 tail tip assembly protein phrog_14 minor tail protein tail -1 25958 26305
AVQ09816.1 MH102284_p66 hypothetical protein phrog_25318 unknown function unknown function -1 43512 43742
AVQ09776.1 MH102284_p26 hypothetical protein phrog_7239 unknown function unknown function 1 16630 16887
AVQ09813.1 MH102284_p63 hypothetical protein singleton unknown function unknown function -1 42954 43139
AVQ09814.1 MH102284_p64 hypothetical protein phrog_14912 unknown function unknown function -1 43136 43318
AVQ09809.1 MH102284_p59 hypothetical protein phrog_11192 unknown function unknown function -1 41457 41786
AVQ09802.1 MH102284_p52 terminase small subunit phrog_606 terminase small subunit head and packaging -1 39699 40223
AVQ09789.1 MH102284_p39 tail fibers protein phrog_584 major tail protein tail -1 29961 30623
AVQ09775.1 MH102284_p25 hypothetical protein phrog_8329 unknown function unknown function 1 16149 16643
AVQ09830.1 MH102284_p80 hypothetical protein phrog_1972 unknown function unknown function 1 49877 50164
AVQ09754.1 MH102284_p4 hypothetical protein phrog_2684 unknown function unknown function 1 1401 1883
AVQ09768.1 MH102284_p18 endonuclease phrog_824 unknown function unknown function -1 8527 8934
AVQ09773.1 MH102284_p23 hypothetical protein phrog_9288 unknown function unknown function 1 15044 15757
AVQ09796.1 MH102284_p46 scaffolding protein phrog_1989 unknown function unknown function -1 33660 34445
AVQ09767.1 MH102284_p17 hypothetical protein phrog_7420 unknown function unknown function -1 8177 8455
AVQ09791.1 MH102284_p41 hypothetical protein phrog_169 tail completion or Neck1 protein connector -1 31020 31460
AVQ09823.1 MH102284_p73 hypothetical protein phrog_7116 unknown function unknown function -1 46301 46855
AVQ09825.1 MH102284_p75 hypothetical protein phrog_18849 unknown function unknown function -1 47509 47742
AVQ09817.1 MH102284_p67 hypothetical protein phrog_139 deoxynucleoside monophosphate kinase other -1 43821 44396
AVQ09801.1 MH102284_p51 terminase large subunit phrog_38 terminase large subunit head and packaging -1 38116 39687
AVQ09770.1 MH102284_p20 transcriptional regulator phrog_2856 transcriptional regulator transcription regulation 1 10999 11607
AVQ09761.1 MH102284_p11 holin phrog_2877 holin lysis -1 5199 5414
AVQ09751.1 MH102284_p1 hypothetical protein phrog_4344 unknown function unknown function 1 172 393
AVQ09832.1 MH102284_p82 hypothetical protein phrog_7421 unknown function unknown function 1 50381 50605
AVQ09837.1 MH102284_p87 hypothetical protein phrog_5016 unknown function unknown function 1 51516 51767
AVQ09766.1 MH102284_p16 DNA adenine methyltransferase phrog_111 DNA methyltransferase other -1 7438 8175
AVQ09753.1 MH102284_p3 Dcm phrog_757 DNA methyltransferase other 1 727 1422
AVQ09819.1 MH102284_p69 hypothetical protein phrog_30280 unknown function unknown function -1 44568 44822
AVQ09829.1 MH102284_p79 hypothetical protein phrog_4653 unknown function unknown function 1 49735 49893
AVQ09781.1 MH102284_p31 tail fiber protein phrog_31 central tail fiber J tail -1 19960 23739
AVQ09792.1 MH102284_p42 hypothetical protein phrog_161 head closure Hc1 connector -1 31453 31824
AVQ09787.1 MH102284_p37 hypothetical protein phrog_680 tail length tape measure protein tail -1 29252 29521
AVQ09752.1 MH102284_p2 hypothetical protein phrog_9323 unknown function unknown function 1 395 619
AVQ09804.1 MH102284_p54 hypothetical protein phrog_2919 unknown function unknown function -1 40541 40723
AVQ09799.1 MH102284_p49 head morphogenesis protein phrog_324 head morphogenesis head and packaging -1 36099 36770
AVQ09758.1 MH102284_p8 hypothetical protein phrog_9539 unknown function unknown function 1 4155 4289
AVQ09827.1 MH102284_p77 hypothetical protein phrog_4841 unknown function unknown function -1 48032 48490
AVQ09820.1 MH102284_p70 hypothetical protein phrog_14011 unknown function unknown function -1 44900 45088
AVQ09779.1 MH102284_p29 tail length tape-measure protein phrog_11265 tail length tape measure protein tail -1 18075 18365
AVQ09803.1 MH102284_p53 hypothetical protein phrog_5976 unknown function unknown function -1 40311 40541
AVQ09835.1 MH102284_p85 hypothetical protein singleton unknown function unknown function 1 51029 51214
AVQ09822.1 MH102284_p72 hypothetical protein phrog_8382 unknown function unknown function -1 45917 46240
AVQ09759.1 MH102284_p9 hypothetical protein phrog_1804 Rz-like spanin lysis -1 4306 4695
AVQ09812.1 MH102284_p62 GntR-family transcriptional regulator phrog_13504 unknown function unknown function -1 42348 42881
AVQ09793.1 MH102284_p43 hypothetical protein phrog_302 virion structural protein head and packaging -1 31821 32225
AVQ09836.1 MH102284_p86 hypothetical protein phrog_11701 unknown function unknown function 1 51286 51534
AVQ09755.1 MH102284_p5 hypothetical protein phrog_12725 unknown function unknown function 1 1880 2128
AVQ09826.1 MH102284_p76 hypothetical protein phrog_38282 unknown function unknown function -1 47748 48029
AVQ09795.1 MH102284_p45 hypothetical protein phrog_264 major head protein head and packaging -1 32609 33583
AVQ09806.1 MH102284_p56 hypothetical protein singleton unknown function unknown function 1 40884 41009
AVQ09833.1 MH102284_p83 hypothetical protein phrog_14152 unknown function unknown function 1 50602 50838
AVQ09764.1 MH102284_p14 hypothetical protein phrog_2180 unknown function unknown function -1 6959 7123
AVQ09828.1 MH102284_p78 hypothetical protein phrog_21159 unknown function unknown function 1 49225 49659
AVQ09757.1 MH102284_p7 hypothetical protein phrog_2794 unknown function unknown function 1 3779 4171
AVQ09780.1 MH102284_p30 exodeoxyribonuclease VIII phrog_412 exonuclease VIII DNA, RNA and nucleotide metabolism -1 18443 19498
AVQ09834.1 MH102284_p84 hypothetical protein phrog_6503 unknown function unknown function 1 50835 51029
AVQ09763.1 MH102284_p13 hypothetical protein phrog_2817 unknown function unknown function -1 6736 6978
AVQ09821.1 MH102284_p71 3'-phosphatase, 5'-polynucleotide kinase phrog_415 polynucleotide kinase other -1 45173 45733
AVQ09824.1 MH102284_p74 hypothetical protein phrog_13854 unknown function unknown function -1 47009 47269
AVQ09762.1 MH102284_p12 phosphoesterase phrog_704 DNA repair exonuclease DNA, RNA and nucleotide metabolism -1 5527 6642