Genomic map of Salmonella phage vB_SenS_PHB06 (MH102285)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
MH102285
Definition
Salmonella phage vB_SenS_PHB06, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Demerecviridae; Markadamsvirinae; Tequintavirus; unclassified Tequintavirus.
DB of origin
NUCCORE
Length
84406
Host Name
Salmonella sp.
Host domain
Bacteria
Is prophage?
undef
Number of proteins
112
%GC
39.18
Number of singletons
2
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
AVQ09895.1 MH102285_p58 hypothetical protein phrog_4593 unknown function unknown function 1 56611 56895
AVQ09879.1 MH102285_p42 tail tube protein phrog_2502 unknown function unknown function -1 44451 44843
AVQ09926.1 MH102285_p89 hypothetical protein phrog_15108 unknown function unknown function 1 73704 73871
AVQ09863.1 MH102285_p26 DNA helicase phrog_16 DNA helicase DNA, RNA and nucleotide metabolism -1 28710 30062
AVQ09854.1 MH102285_p17 hypothetical protein phrog_5592 unknown function unknown function -1 22061 22312
AVQ09839.1 MH102285_p2 capsid and scaffold protein phrog_10 major head protein head and packaging 1 347 1723
AVQ09849.1 MH102285_p12 tail length tape-measure protein phrog_31 central tail fiber J tail 1 11207 14056
AVQ09860.1 MH102285_p23 homing endonuclease phrog_99 HNH endonuclease DNA, RNA and nucleotide metabolism -1 26887 27402
AVQ09920.1 MH102285_p83 hypothetical protein phrog_6073 Rz-like spanin lysis 1 70669 70866
AVQ09924.1 MH102285_p87 hypothetical protein phrog_5598 unknown function unknown function 1 73186 73437
AVQ09868.1 MH102285_p31 D5 protein phrog_323 transcriptional regulator, D5-like transcription regulation -1 35621 36388
AVQ09862.1 MH102285_p25 hypothetical protein phrog_4258 unknown function unknown function -1 28205 28489
AVQ09886.1 MH102285_p49 hypothetical protein phrog_487 NrdD-like anaerobic ribonucleotide reductase large subunit moron, auxiliary metabolic gene and host takeover -1 47369 49243
AVQ09884.1 MH102285_p47 hypothetical protein phrog_5236 unknown function unknown function -1 46775 46978
AVQ09899.1 MH102285_p62 hypothetical protein phrog_4586 unknown function unknown function 1 58255 58491
AVQ09846.1 MH102285_p9 hypothetical protein phrog_3914 tail assembly chaperone tail 1 6390 6722
AVQ09904.1 MH102285_p67 cell wall hydrolase phrog_938 endolysin lysis 1 60932 61381
AVQ09938.1 MH102285_p101 hypothetical protein phrog_5468 unknown function unknown function 1 77901 78245
AVQ09935.1 MH102285_p98 hypothetical protein phrog_5486 unknown function unknown function 1 76839 77234
AVQ09943.1 MH102285_p106 ATP-dependent Clp protease proteolytic subunit phrog_1827 ATP-dependent protease other 1 80569 81168
AVQ09948.1 MH102285_p111 thioredoxin phrog_22 thioredoxin domain DNA, RNA and nucleotide metabolism 1 83385 83675
AVQ09909.1 MH102285_p72 hypothetical protein phrog_8119 unknown function unknown function -1 64717 65703
AVQ09949.1 MH102285_p112 hypothetical protein phrog_6798 unknown function unknown function 1 83855 84232
AVQ09894.1 MH102285_p57 ribonuclease H phrog_531 Rnase H DNA, RNA and nucleotide metabolism 1 56058 56537
AVQ09934.1 MH102285_p97 hypothetical protein phrog_4821 unknown function unknown function 1 76547 76846
AVQ09883.1 MH102285_p46 hypothetical protein phrog_5827 unknown function unknown function -1 46585 46806
AVQ09890.1 MH102285_p53 hypothetical protein phrog_86 ribonucleoside diphosphate reductase small subunit DNA, RNA and nucleotide metabolism 1 53154 54299
AVQ09848.1 MH102285_p11 hypothetical protein phrog_1302 distal tail protein tail 1 10596 11210
AVQ09889.1 MH102285_p52 hypothetical protein phrog_84 ribonucleoside-diphosphate reductase large subunit DNA, RNA and nucleotide metabolism 1 50717 53047
AVQ09871.1 MH102285_p34 hypothetical protein phrog_8267 unknown function unknown function -1 38327 38515
AVQ09842.1 MH102285_p5 hypothetical protein phrog_3907 tail terminator connector 1 3066 3551
AVQ09931.1 MH102285_p94 hypothetical protein phrog_4499 unknown function unknown function 1 75413 75727
AVQ09874.1 MH102285_p37 hypothetical protein phrog_1725 DNA binding protein DNA, RNA and nucleotide metabolism -1 39293 39703
AVQ09906.1 MH102285_p69 recombination related exonuclease phrog_1460 tRNA amidotransferase DNA, RNA and nucleotide metabolism 1 61620 62063
AVQ09872.1 MH102285_p35 hypothetical protein phrog_4053 transcriptional regulator transcription regulation -1 38601 38909
AVQ09925.1 MH102285_p88 hypothetical protein phrog_5919 unknown function unknown function 1 73418 73594
AVQ09882.1 MH102285_p45 SIR2 family NAD-dependent protein deacetylase phrog_2162 Sir2 (NAD-dependent deacetylase) DNA, RNA and nucleotide metabolism -1 45777 46592
AVQ09945.1 MH102285_p108 endolysin phrog_465 endolysin lysis 1 81978 82391
AVQ09930.1 MH102285_p93 pyruvate formate-lyase phrog_1209 unknown function unknown function 1 74963 75331
AVQ09897.1 MH102285_p60 hypothetical protein phrog_4516 unknown function unknown function 1 57417 57932
AVQ09893.1 MH102285_p56 hypothetical protein phrog_5321 unknown function unknown function 1 55777 56058
AVQ09892.1 MH102285_p55 thymidylate synthase phrog_160 thymidylate synthase DNA, RNA and nucleotide metabolism 1 54829 55683
AVQ09866.1 MH102285_p29 DNA primase/helicase phrog_47 DNA primase DNA, RNA and nucleotide metabolism -1 33179 34069
AVQ09918.1 MH102285_p81 hypothetical protein phrog_5473 unknown function unknown function 1 69311 69496
AVQ09908.1 MH102285_p71 hypothetical protein phrog_7894 unknown function unknown function -1 64279 64695
AVQ09905.1 MH102285_p68 hypothetical protein phrog_5077 unknown function unknown function 1 61450 61620
AVQ09873.1 MH102285_p36 hypothetical protein phrog_3696 unknown function unknown function -1 38960 39256
AVQ09857.1 MH102285_p20 endonuclease phrog_244 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism -1 23608 24090
AVQ09878.1 MH102285_p41 DNA primase C phrog_3712 replication origin binding DNA, RNA and nucleotide metabolism -1 41041 43830
AVQ09864.1 MH102285_p27 hypothetical protein phrog_19628 unknown function unknown function -1 30059 30346
AVQ09916.1 MH102285_p79 hypothetical protein phrog_5876 unknown function unknown function 1 68556 68828
AVQ09901.1 MH102285_p64 hypothetical protein phrog_5252 unknown function unknown function 1 59292 59474
AVQ09927.1 MH102285_p90 hypothetical protein phrog_4760 unknown function unknown function 1 73939 74232
AVQ09922.1 MH102285_p85 hypothetical protein phrog_16298 unknown function unknown function 1 72065 72247
AVQ09939.1 MH102285_p102 hypothetical protein phrog_4243 unknown function unknown function 1 78400 79080
AVQ09888.1 MH102285_p51 hypothetical protein phrog_5357 tail length tape measure protein tail 1 50353 50595
AVQ09923.1 MH102285_p86 hypothetical protein phrog_2210 unknown function unknown function 1 72719 72919
AVQ09843.1 MH102285_p6 major tail protein phrog_3575 major tail protein tail 1 3578 4987
AVQ09928.1 MH102285_p91 hypothetical protein phrog_9814 unknown function unknown function 1 74232 74438
AVQ09937.1 MH102285_p100 hypothetical protein phrog_5265 unknown function unknown function 1 77505 77789
AVQ09850.1 MH102285_p13 tail fibers protein phrog_3890 straight fibre tail protein tail 1 14116 16113
AVQ09845.1 MH102285_p8 hypothetical protein phrog_313 Tail assembly chaperone tail 1 5888 6292
AVQ09838.1 MH102285_p1 capsid and scaffold protein singleton unknown function unknown function 1 198 329
AVQ09914.1 MH102285_p77 hypothetical protein phrog_5153 unknown function unknown function 1 67437 67643
AVQ09915.1 MH102285_p78 hypothetical protein phrog_4551 unknown function unknown function 1 67734 68009
AVQ09942.1 MH102285_p105 deoxynucleotide monophosphate kinase phrog_139 deoxynucleoside monophosphate kinase other 1 79804 80556
AVQ09859.1 MH102285_p22 recombinase phrog_100 SbcD-like subunit of palindrome specific endonuclease DNA, RNA and nucleotide metabolism -1 25913 26806
AVQ09855.1 MH102285_p18 deoxyuridine 5'-triphosphate nucleotidohydrolase phrog_135 dUTPase DNA, RNA and nucleotide metabolism -1 22290 22736
AVQ09867.1 MH102285_p30 replicative helicase phrog_19 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism -1 34066 35532
AVQ09876.1 MH102285_p39 hypothetical protein phrog_3611 helicase DNA, RNA and nucleotide metabolism -1 40051 40755
AVQ09865.1 MH102285_p28 DNA polymerase I phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism -1 30549 33116
AVQ09919.1 MH102285_p82 hypothetical protein phrog_3972 unknown function unknown function 1 69868 70215
AVQ09891.1 MH102285_p54 dihydrofolate reductase phrog_316 dihydrofolate reductase DNA, RNA and nucleotide metabolism 1 54296 54829
AVQ09947.1 MH102285_p110 hypothetical protein phrog_4328 unknown function unknown function 1 82961 83392
AVQ09885.1 MH102285_p48 hypothetical protein phrog_7953 unknown function unknown function -1 46988 47269
AVQ09841.1 MH102285_p4 hypothetical protein phrog_3725 tail completion or Neck1 protein connector 1 2295 3062
AVQ09861.1 MH102285_p24 D11 protein phrog_1607 single strand DNA binding protein DNA, RNA and nucleotide metabolism -1 27439 28212
AVQ09875.1 MH102285_p38 hypothetical protein phrog_643 transcriptional regulator transcription regulation -1 39807 40058
AVQ09944.1 MH102285_p107 holin phrog_860 holin lysis 1 81325 81981
AVQ09870.1 MH102285_p33 DNA ligase phrog_3359 NAD-dependent DNA ligase DNA, RNA and nucleotide metabolism -1 37363 38334
AVQ09932.1 MH102285_p95 hypothetical protein phrog_5021 unknown function unknown function 1 75849 76196
AVQ09907.1 MH102285_p70 hypothetical protein phrog_200 lipoprotein other 1 63007 63954
AVQ09852.1 MH102285_p15 tail fibers protein phrog_5481 tail fiber protein tail 1 16540 19890
AVQ09856.1 MH102285_p19 ribonuclease H phrog_107 exonuclease DNA, RNA and nucleotide metabolism -1 22733 23608
AVQ09913.1 MH102285_p76 hypothetical protein phrog_7716 unknown function unknown function 1 67277 67444
AVQ09881.1 MH102285_p44 hypothetical protein phrog_18062 Sir2 (NAD-dependent deacetylase) DNA, RNA and nucleotide metabolism -1 45284 45562
AVQ09844.1 MH102285_p7 tail fibers protein phrog_3889 base plate tail tube protein tail 1 4992 5891
AVQ09929.1 MH102285_p92 hypothetical protein phrog_3909 unknown function unknown function 1 74726 74920
AVQ09911.1 MH102285_p74 hypothetical protein phrog_10617 unknown function unknown function 1 66700 66888
AVQ09887.1 MH102285_p50 phosphate starvation-inducible protein PhoH phrog_170 PhoH-like phosphate starvation-inducible other 1 49599 50351
AVQ09840.1 MH102285_p3 hypothetical protein phrog_442 head-tail adaptor connector 1 1783 2295
AVQ09858.1 MH102285_p21 recombination related exonuclease phrog_77 SbcC-like subunit of palindrome specific endonuclease DNA, RNA and nucleotide metabolism -1 24094 25932
AVQ09851.1 MH102285_p14 hypothetical protein phrog_1084 unknown function unknown function 1 16118 16540
AVQ09933.1 MH102285_p96 hypothetical protein phrog_2855 unknown function unknown function 1 76273 76554
AVQ09921.1 MH102285_p84 hypothetical protein phrog_6221 unknown function unknown function 1 71056 71223
AVQ09880.1 MH102285_p43 hypothetical protein phrog_2502 unknown function unknown function -1 44853 45281
AVQ09877.1 MH102285_p40 hypothetical protein phrog_5291 unknown function unknown function -1 40824 41057
AVQ09917.1 MH102285_p80 hypothetical protein phrog_22204 unknown function unknown function -1 69159 69290
AVQ09946.1 MH102285_p109 hypothetical protein phrog_5944 unknown function unknown function 1 82469 82885
AVQ09898.1 MH102285_p61 tail length tape-measure protein phrog_2380 unknown function unknown function 1 57997 58212
AVQ09853.1 MH102285_p16 tail fibers protein phrog_12321 tail fiber protein tail 1 19933 22020
AVQ09936.1 MH102285_p99 hypothetical protein phrog_5792 unknown function unknown function 1 77212 77508
AVQ09869.1 MH102285_p32 DNA ligase phrog_3498 NAD-dependent DNA ligase DNA, RNA and nucleotide metabolism -1 36381 37160
AVQ09896.1 MH102285_p59 swarming motility protein phrog_1017 unknown function unknown function 1 56892 57341
AVQ09912.1 MH102285_p75 antitermination protein Q phrog_6060 anti-termination protein Q-like transcription regulation 1 66898 67083
AVQ09900.1 MH102285_p63 metallopeptidase phrog_255 exonuclease DNA, RNA and nucleotide metabolism 1 58520 59221
AVQ09902.1 MH102285_p65 tail fiber protein phrog_1491 tail fiber protein tail 1 59528 60166
AVQ09910.1 MH102285_p73 hypothetical protein phrog_849 DNA primase DNA, RNA and nucleotide metabolism 1 65969 66487
AVQ09903.1 MH102285_p66 hypothetical protein phrog_1479 unknown function unknown function 1 60609 60926
AVQ09847.1 MH102285_p10 tail length tape-measure protein phrog_3779 tail length tape measure protein tail 1 6806 10486
AVQ09940.1 MH102285_p103 hypothetical protein phrog_739 Rz-like spanin lysis 1 79077 79520
AVQ09941.1 MH102285_p104 hypothetical protein singleton unknown function unknown function 1 79670 79804