| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
MH102285 |
Definition |
Salmonella phage vB_SenS_PHB06, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Demerecviridae; Markadamsvirinae; Tequintavirus; unclassified Tequintavirus. |
DB of origin |
NUCCORE |
Length |
84406 |
Host Name |
Salmonella sp. |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
112 |
%GC |
39.18 |
Number of singletons |
2 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| AVQ09895.1 | MH102285_p58 | hypothetical protein | phrog_4593 | unknown function | unknown function | 1 | 56611 | 56895 |
| AVQ09879.1 | MH102285_p42 | tail tube protein | phrog_2502 | unknown function | unknown function | -1 | 44451 | 44843 |
| AVQ09926.1 | MH102285_p89 | hypothetical protein | phrog_15108 | unknown function | unknown function | 1 | 73704 | 73871 |
| AVQ09863.1 | MH102285_p26 | DNA helicase | phrog_16 | DNA helicase | DNA, RNA and nucleotide metabolism | -1 | 28710 | 30062 |
| AVQ09854.1 | MH102285_p17 | hypothetical protein | phrog_5592 | unknown function | unknown function | -1 | 22061 | 22312 |
| AVQ09839.1 | MH102285_p2 | capsid and scaffold protein | phrog_10 | major head protein | head and packaging | 1 | 347 | 1723 |
| AVQ09849.1 | MH102285_p12 | tail length tape-measure protein | phrog_31 | central tail fiber J | tail | 1 | 11207 | 14056 |
| AVQ09860.1 | MH102285_p23 | homing endonuclease | phrog_99 | HNH endonuclease | DNA, RNA and nucleotide metabolism | -1 | 26887 | 27402 |
| AVQ09920.1 | MH102285_p83 | hypothetical protein | phrog_6073 | Rz-like spanin | lysis | 1 | 70669 | 70866 |
| AVQ09924.1 | MH102285_p87 | hypothetical protein | phrog_5598 | unknown function | unknown function | 1 | 73186 | 73437 |
| AVQ09868.1 | MH102285_p31 | D5 protein | phrog_323 | transcriptional regulator, D5-like | transcription regulation | -1 | 35621 | 36388 |
| AVQ09862.1 | MH102285_p25 | hypothetical protein | phrog_4258 | unknown function | unknown function | -1 | 28205 | 28489 |
| AVQ09886.1 | MH102285_p49 | hypothetical protein | phrog_487 | NrdD-like anaerobic ribonucleotide reductase large subunit | moron, auxiliary metabolic gene and host takeover | -1 | 47369 | 49243 |
| AVQ09884.1 | MH102285_p47 | hypothetical protein | phrog_5236 | unknown function | unknown function | -1 | 46775 | 46978 |
| AVQ09899.1 | MH102285_p62 | hypothetical protein | phrog_4586 | unknown function | unknown function | 1 | 58255 | 58491 |
| AVQ09846.1 | MH102285_p9 | hypothetical protein | phrog_3914 | tail assembly chaperone | tail | 1 | 6390 | 6722 |
| AVQ09904.1 | MH102285_p67 | cell wall hydrolase | phrog_938 | endolysin | lysis | 1 | 60932 | 61381 |
| AVQ09938.1 | MH102285_p101 | hypothetical protein | phrog_5468 | unknown function | unknown function | 1 | 77901 | 78245 |
| AVQ09935.1 | MH102285_p98 | hypothetical protein | phrog_5486 | unknown function | unknown function | 1 | 76839 | 77234 |
| AVQ09943.1 | MH102285_p106 | ATP-dependent Clp protease proteolytic subunit | phrog_1827 | ATP-dependent protease | other | 1 | 80569 | 81168 |
| AVQ09948.1 | MH102285_p111 | thioredoxin | phrog_22 | thioredoxin domain | DNA, RNA and nucleotide metabolism | 1 | 83385 | 83675 |
| AVQ09909.1 | MH102285_p72 | hypothetical protein | phrog_8119 | unknown function | unknown function | -1 | 64717 | 65703 |
| AVQ09949.1 | MH102285_p112 | hypothetical protein | phrog_6798 | unknown function | unknown function | 1 | 83855 | 84232 |
| AVQ09894.1 | MH102285_p57 | ribonuclease H | phrog_531 | Rnase H | DNA, RNA and nucleotide metabolism | 1 | 56058 | 56537 |
| AVQ09934.1 | MH102285_p97 | hypothetical protein | phrog_4821 | unknown function | unknown function | 1 | 76547 | 76846 |
| AVQ09883.1 | MH102285_p46 | hypothetical protein | phrog_5827 | unknown function | unknown function | -1 | 46585 | 46806 |
| AVQ09890.1 | MH102285_p53 | hypothetical protein | phrog_86 | ribonucleoside diphosphate reductase small subunit | DNA, RNA and nucleotide metabolism | 1 | 53154 | 54299 |
| AVQ09848.1 | MH102285_p11 | hypothetical protein | phrog_1302 | distal tail protein | tail | 1 | 10596 | 11210 |
| AVQ09889.1 | MH102285_p52 | hypothetical protein | phrog_84 | ribonucleoside-diphosphate reductase large subunit | DNA, RNA and nucleotide metabolism | 1 | 50717 | 53047 |
| AVQ09871.1 | MH102285_p34 | hypothetical protein | phrog_8267 | unknown function | unknown function | -1 | 38327 | 38515 |
| AVQ09842.1 | MH102285_p5 | hypothetical protein | phrog_3907 | tail terminator | connector | 1 | 3066 | 3551 |
| AVQ09931.1 | MH102285_p94 | hypothetical protein | phrog_4499 | unknown function | unknown function | 1 | 75413 | 75727 |
| AVQ09874.1 | MH102285_p37 | hypothetical protein | phrog_1725 | DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 39293 | 39703 |
| AVQ09906.1 | MH102285_p69 | recombination related exonuclease | phrog_1460 | tRNA amidotransferase | DNA, RNA and nucleotide metabolism | 1 | 61620 | 62063 |
| AVQ09872.1 | MH102285_p35 | hypothetical protein | phrog_4053 | transcriptional regulator | transcription regulation | -1 | 38601 | 38909 |
| AVQ09925.1 | MH102285_p88 | hypothetical protein | phrog_5919 | unknown function | unknown function | 1 | 73418 | 73594 |
| AVQ09882.1 | MH102285_p45 | SIR2 family NAD-dependent protein deacetylase | phrog_2162 | Sir2 (NAD-dependent deacetylase) | DNA, RNA and nucleotide metabolism | -1 | 45777 | 46592 |
| AVQ09945.1 | MH102285_p108 | endolysin | phrog_465 | endolysin | lysis | 1 | 81978 | 82391 |
| AVQ09930.1 | MH102285_p93 | pyruvate formate-lyase | phrog_1209 | unknown function | unknown function | 1 | 74963 | 75331 |
| AVQ09897.1 | MH102285_p60 | hypothetical protein | phrog_4516 | unknown function | unknown function | 1 | 57417 | 57932 |
| AVQ09893.1 | MH102285_p56 | hypothetical protein | phrog_5321 | unknown function | unknown function | 1 | 55777 | 56058 |
| AVQ09892.1 | MH102285_p55 | thymidylate synthase | phrog_160 | thymidylate synthase | DNA, RNA and nucleotide metabolism | 1 | 54829 | 55683 |
| AVQ09866.1 | MH102285_p29 | DNA primase/helicase | phrog_47 | DNA primase | DNA, RNA and nucleotide metabolism | -1 | 33179 | 34069 |
| AVQ09918.1 | MH102285_p81 | hypothetical protein | phrog_5473 | unknown function | unknown function | 1 | 69311 | 69496 |
| AVQ09908.1 | MH102285_p71 | hypothetical protein | phrog_7894 | unknown function | unknown function | -1 | 64279 | 64695 |
| AVQ09905.1 | MH102285_p68 | hypothetical protein | phrog_5077 | unknown function | unknown function | 1 | 61450 | 61620 |
| AVQ09873.1 | MH102285_p36 | hypothetical protein | phrog_3696 | unknown function | unknown function | -1 | 38960 | 39256 |
| AVQ09857.1 | MH102285_p20 | endonuclease | phrog_244 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | -1 | 23608 | 24090 |
| AVQ09878.1 | MH102285_p41 | DNA primase C | phrog_3712 | replication origin binding | DNA, RNA and nucleotide metabolism | -1 | 41041 | 43830 |
| AVQ09864.1 | MH102285_p27 | hypothetical protein | phrog_19628 | unknown function | unknown function | -1 | 30059 | 30346 |
| AVQ09916.1 | MH102285_p79 | hypothetical protein | phrog_5876 | unknown function | unknown function | 1 | 68556 | 68828 |
| AVQ09901.1 | MH102285_p64 | hypothetical protein | phrog_5252 | unknown function | unknown function | 1 | 59292 | 59474 |
| AVQ09927.1 | MH102285_p90 | hypothetical protein | phrog_4760 | unknown function | unknown function | 1 | 73939 | 74232 |
| AVQ09922.1 | MH102285_p85 | hypothetical protein | phrog_16298 | unknown function | unknown function | 1 | 72065 | 72247 |
| AVQ09939.1 | MH102285_p102 | hypothetical protein | phrog_4243 | unknown function | unknown function | 1 | 78400 | 79080 |
| AVQ09888.1 | MH102285_p51 | hypothetical protein | phrog_5357 | tail length tape measure protein | tail | 1 | 50353 | 50595 |
| AVQ09923.1 | MH102285_p86 | hypothetical protein | phrog_2210 | unknown function | unknown function | 1 | 72719 | 72919 |
| AVQ09843.1 | MH102285_p6 | major tail protein | phrog_3575 | major tail protein | tail | 1 | 3578 | 4987 |
| AVQ09928.1 | MH102285_p91 | hypothetical protein | phrog_9814 | unknown function | unknown function | 1 | 74232 | 74438 |
| AVQ09937.1 | MH102285_p100 | hypothetical protein | phrog_5265 | unknown function | unknown function | 1 | 77505 | 77789 |
| AVQ09850.1 | MH102285_p13 | tail fibers protein | phrog_3890 | straight fibre tail protein | tail | 1 | 14116 | 16113 |
| AVQ09845.1 | MH102285_p8 | hypothetical protein | phrog_313 | Tail assembly chaperone | tail | 1 | 5888 | 6292 |
| AVQ09838.1 | MH102285_p1 | capsid and scaffold protein | singleton | unknown function | unknown function | 1 | 198 | 329 |
| AVQ09914.1 | MH102285_p77 | hypothetical protein | phrog_5153 | unknown function | unknown function | 1 | 67437 | 67643 |
| AVQ09915.1 | MH102285_p78 | hypothetical protein | phrog_4551 | unknown function | unknown function | 1 | 67734 | 68009 |
| AVQ09942.1 | MH102285_p105 | deoxynucleotide monophosphate kinase | phrog_139 | deoxynucleoside monophosphate kinase | other | 1 | 79804 | 80556 |
| AVQ09859.1 | MH102285_p22 | recombinase | phrog_100 | SbcD-like subunit of palindrome specific endonuclease | DNA, RNA and nucleotide metabolism | -1 | 25913 | 26806 |
| AVQ09855.1 | MH102285_p18 | deoxyuridine 5'-triphosphate nucleotidohydrolase | phrog_135 | dUTPase | DNA, RNA and nucleotide metabolism | -1 | 22290 | 22736 |
| AVQ09867.1 | MH102285_p30 | replicative helicase | phrog_19 | DnaB-like replicative helicase | DNA, RNA and nucleotide metabolism | -1 | 34066 | 35532 |
| AVQ09876.1 | MH102285_p39 | hypothetical protein | phrog_3611 | helicase | DNA, RNA and nucleotide metabolism | -1 | 40051 | 40755 |
| AVQ09865.1 | MH102285_p28 | DNA polymerase I | phrog_17 | DNA polymerase | DNA, RNA and nucleotide metabolism | -1 | 30549 | 33116 |
| AVQ09919.1 | MH102285_p82 | hypothetical protein | phrog_3972 | unknown function | unknown function | 1 | 69868 | 70215 |
| AVQ09891.1 | MH102285_p54 | dihydrofolate reductase | phrog_316 | dihydrofolate reductase | DNA, RNA and nucleotide metabolism | 1 | 54296 | 54829 |
| AVQ09947.1 | MH102285_p110 | hypothetical protein | phrog_4328 | unknown function | unknown function | 1 | 82961 | 83392 |
| AVQ09885.1 | MH102285_p48 | hypothetical protein | phrog_7953 | unknown function | unknown function | -1 | 46988 | 47269 |
| AVQ09841.1 | MH102285_p4 | hypothetical protein | phrog_3725 | tail completion or Neck1 protein | connector | 1 | 2295 | 3062 |
| AVQ09861.1 | MH102285_p24 | D11 protein | phrog_1607 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 27439 | 28212 |
| AVQ09875.1 | MH102285_p38 | hypothetical protein | phrog_643 | transcriptional regulator | transcription regulation | -1 | 39807 | 40058 |
| AVQ09944.1 | MH102285_p107 | holin | phrog_860 | holin | lysis | 1 | 81325 | 81981 |
| AVQ09870.1 | MH102285_p33 | DNA ligase | phrog_3359 | NAD-dependent DNA ligase | DNA, RNA and nucleotide metabolism | -1 | 37363 | 38334 |
| AVQ09932.1 | MH102285_p95 | hypothetical protein | phrog_5021 | unknown function | unknown function | 1 | 75849 | 76196 |
| AVQ09907.1 | MH102285_p70 | hypothetical protein | phrog_200 | lipoprotein | other | 1 | 63007 | 63954 |
| AVQ09852.1 | MH102285_p15 | tail fibers protein | phrog_5481 | tail fiber protein | tail | 1 | 16540 | 19890 |
| AVQ09856.1 | MH102285_p19 | ribonuclease H | phrog_107 | exonuclease | DNA, RNA and nucleotide metabolism | -1 | 22733 | 23608 |
| AVQ09913.1 | MH102285_p76 | hypothetical protein | phrog_7716 | unknown function | unknown function | 1 | 67277 | 67444 |
| AVQ09881.1 | MH102285_p44 | hypothetical protein | phrog_18062 | Sir2 (NAD-dependent deacetylase) | DNA, RNA and nucleotide metabolism | -1 | 45284 | 45562 |
| AVQ09844.1 | MH102285_p7 | tail fibers protein | phrog_3889 | base plate tail tube protein | tail | 1 | 4992 | 5891 |
| AVQ09929.1 | MH102285_p92 | hypothetical protein | phrog_3909 | unknown function | unknown function | 1 | 74726 | 74920 |
| AVQ09911.1 | MH102285_p74 | hypothetical protein | phrog_10617 | unknown function | unknown function | 1 | 66700 | 66888 |
| AVQ09887.1 | MH102285_p50 | phosphate starvation-inducible protein PhoH | phrog_170 | PhoH-like phosphate starvation-inducible | other | 1 | 49599 | 50351 |
| AVQ09840.1 | MH102285_p3 | hypothetical protein | phrog_442 | head-tail adaptor | connector | 1 | 1783 | 2295 |
| AVQ09858.1 | MH102285_p21 | recombination related exonuclease | phrog_77 | SbcC-like subunit of palindrome specific endonuclease | DNA, RNA and nucleotide metabolism | -1 | 24094 | 25932 |
| AVQ09851.1 | MH102285_p14 | hypothetical protein | phrog_1084 | unknown function | unknown function | 1 | 16118 | 16540 |
| AVQ09933.1 | MH102285_p96 | hypothetical protein | phrog_2855 | unknown function | unknown function | 1 | 76273 | 76554 |
| AVQ09921.1 | MH102285_p84 | hypothetical protein | phrog_6221 | unknown function | unknown function | 1 | 71056 | 71223 |
| AVQ09880.1 | MH102285_p43 | hypothetical protein | phrog_2502 | unknown function | unknown function | -1 | 44853 | 45281 |
| AVQ09877.1 | MH102285_p40 | hypothetical protein | phrog_5291 | unknown function | unknown function | -1 | 40824 | 41057 |
| AVQ09917.1 | MH102285_p80 | hypothetical protein | phrog_22204 | unknown function | unknown function | -1 | 69159 | 69290 |
| AVQ09946.1 | MH102285_p109 | hypothetical protein | phrog_5944 | unknown function | unknown function | 1 | 82469 | 82885 |
| AVQ09898.1 | MH102285_p61 | tail length tape-measure protein | phrog_2380 | unknown function | unknown function | 1 | 57997 | 58212 |
| AVQ09853.1 | MH102285_p16 | tail fibers protein | phrog_12321 | tail fiber protein | tail | 1 | 19933 | 22020 |
| AVQ09936.1 | MH102285_p99 | hypothetical protein | phrog_5792 | unknown function | unknown function | 1 | 77212 | 77508 |
| AVQ09869.1 | MH102285_p32 | DNA ligase | phrog_3498 | NAD-dependent DNA ligase | DNA, RNA and nucleotide metabolism | -1 | 36381 | 37160 |
| AVQ09896.1 | MH102285_p59 | swarming motility protein | phrog_1017 | unknown function | unknown function | 1 | 56892 | 57341 |
| AVQ09912.1 | MH102285_p75 | antitermination protein Q | phrog_6060 | anti-termination protein Q-like | transcription regulation | 1 | 66898 | 67083 |
| AVQ09900.1 | MH102285_p63 | metallopeptidase | phrog_255 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 58520 | 59221 |
| AVQ09902.1 | MH102285_p65 | tail fiber protein | phrog_1491 | tail fiber protein | tail | 1 | 59528 | 60166 |
| AVQ09910.1 | MH102285_p73 | hypothetical protein | phrog_849 | DNA primase | DNA, RNA and nucleotide metabolism | 1 | 65969 | 66487 |
| AVQ09903.1 | MH102285_p66 | hypothetical protein | phrog_1479 | unknown function | unknown function | 1 | 60609 | 60926 |
| AVQ09847.1 | MH102285_p10 | tail length tape-measure protein | phrog_3779 | tail length tape measure protein | tail | 1 | 6806 | 10486 |
| AVQ09940.1 | MH102285_p103 | hypothetical protein | phrog_739 | Rz-like spanin | lysis | 1 | 79077 | 79520 |
| AVQ09941.1 | MH102285_p104 | hypothetical protein | singleton | unknown function | unknown function | 1 | 79670 | 79804 |