Genomic map of Streptococcus virus Sfi19 (NC_000871)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_000871
Definition
Streptococcus phage Sfi19, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Moineauvirus.
DB of origin
REFSEQ
Length
37370
Host Name
Streptococcus thermophilus
Host domain
Bacteria
Is prophage?
undef
Number of proteins
45
%GC
38.27
Number of singletons
3
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
NP_049945.1 NC_000871_p24 hypothetical protein singleton unknown function unknown function 1 25975 26139
NP_049955.1 NC_000871_p35 primase phrog_864 DNA primase DNA, RNA and nucleotide metabolism 1 31767 33287
NP_049947.1 NC_000871_p26 cro repressor phrog_3 transcriptional repressor transcription regulation 1 26647 26856
NP_049934.1 NC_000871_p12 tail component protein phrog_1346 tail protein tail 1 9390 9743
NP_049937.1 NC_000871_p15 tail-host specificity protein phrog_588 tail fiber protein and host specificity tail 1 16396 20271
NP_049957.1 NC_000871_p37 hypothetical protein phrog_93 endonuclease DNA, RNA and nucleotide metabolism 1 33953 34273
NP_049963.1 NC_000871_p43 DNA binding protein phrog_1994 DNA binding protein DNA, RNA and nucleotide metabolism 1 35906 36370
NP_049959.1 NC_000871_p39 hypothetical protein phrog_803 host nuclease inhibitor moron, auxiliary metabolic gene and host takeover 1 34484 34657
NP_049950.1 NC_000871_p30 hypothetical protein phrog_253 Mu Gam-like end protection DNA, RNA and nucleotide metabolism 1 28029 28502
NP_049948.1 NC_000871_p28 hypothetical protein phrog_7964 unknown function unknown function 1 27188 27877
NP_049925.1 NC_000871_p3 terminase small subunit phrog_83 terminase small subunit head and packaging 1 1566 2027
NP_049938.1 NC_000871_p16 minor structural protein phrog_372 tail protein tail 1 20274 22286
NP_049923.1 NC_000871_p1 Apaf-1 related killer DARK phrog_36 transcriptional regulator transcription regulation 1 363 761
NP_049943.1 NC_000871_p22 hypothetical protein phrog_8487 unknown function unknown function 1 24953 25288
NP_597798.1 NC_000871_p18 hypothetical protein phrog_1567 unknown function unknown function 1 22705 22851
NP_049942.1 NC_000871_p21 lysin phrog_998 endolysin lysis 1 23507 24373
NP_049930.1 NC_000871_p8 DNA packaging protein phrog_40 head-tail adaptor Ad1 connector 1 7215 7529
NP_049949.1 NC_000871_p29 hypothetical protein singleton unknown function unknown function 1 27279 27668
NP_049958.1 NC_000871_p38 hypothetical protein phrog_1982 unknown function unknown function 1 34257 34526
NP_049953.1 NC_000871_p33 hypothetical protein phrog_378 single strand DNA binding protein DNA, RNA and nucleotide metabolism 1 30513 30968
NP_049927.1 NC_000871_p5 head-tail joining protein phrog_1142 unknown function unknown function 1 3982 4161
NP_049931.1 NC_000871_p9 head-tail joining protein phrog_25 head closure Hc1 connector 1 7529 7879
NP_597799.1 NC_000871_p27 hypothetical protein phrog_1022 unknown function unknown function 1 26873 26995
NP_049961.1 NC_000871_p41 hypothetical protein phrog_33645 unknown function unknown function 1 34810 35013
NP_049944.1 NC_000871_p23 hypothetical protein phrog_4964 unknown function unknown function 1 25310 25861
NP_049932.1 NC_000871_p10 tail component protein phrog_5 tail completion or Neck1 protein connector 1 7886 8347
NP_049954.1 NC_000871_p34 replication protein phrog_695 DNA polymerase/primase DNA, RNA and nucleotide metabolism 1 30971 31786
NP_049965.1 NC_000871_p45 hypothetical protein phrog_1814 unknown function unknown function 1 36645 37352
NP_049941.1 NC_000871_p20 holin phrog_297 holin lysis 1 23263 23526
NP_049964.1 NC_000871_p44 hypothetical protein phrog_884 unknown function unknown function 1 36345 36641
NP_049926.1 NC_000871_p4 terminase large subunit phrog_9 terminase large subunit head and packaging 1 2107 3978
NP_049928.1 NC_000871_p6 portal protein phrog_12 portal protein head and packaging 1 4179 5339
NP_049936.1 NC_000871_p14 tail component protein phrog_202 distal tail protein Dit tail 1 14849 16396
NP_049956.1 NC_000871_p36 hypothetical protein phrog_9118 unknown function unknown function 1 33540 33971
NP_049939.1 NC_000871_p17 hypothetical protein phrog_1060 unknown function unknown function 1 22303 22698
NP_049946.1 NC_000871_p25 hypothetical protein singleton unknown function unknown function 1 26264 26431
NP_049929.1 NC_000871_p7 major head protein phrog_10 major head protein head and packaging 1 6007 7200
NP_049940.1 NC_000871_p19 holin phrog_199 holin lysis 1 22866 23291
NP_049951.1 NC_000871_p31 predicted NTP-binding motif protein phrog_124 Sak4-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 28499 29200
NP_049924.1 NC_000871_p2 hypothetical protein phrog_144 HNH endonuclease DNA, RNA and nucleotide metabolism 1 865 1377
NP_049952.1 NC_000871_p32 helicase phrog_16 DNA helicase DNA, RNA and nucleotide metabolism 1 29175 30506
NP_049960.1 NC_000871_p40 hypothetical protein phrog_1489 unknown function unknown function 1 34654 34809
NP_049935.1 NC_000871_p13 minor tail protein phrog_167 tail length tape measure protein tail 1 9963 14843
NP_049962.1 NC_000871_p42 hypothetical protein phrog_121 unknown function unknown function 1 35291 35869
NP_049933.1 NC_000871_p11 major tail protein phrog_88 major tail protein tail 1 8705 9316