Genomic map of Pseudomonas phage Pf3 (NC_001418)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_001418
Definition
Pseudomonas phage Pf3, complete genome.
Molecule type
ss-DNA
Genome structure
circular
Taxonomy
Viruses; Monodnaviria; Loebvirae; Hofneiviricota; Faserviricetes; Tubulavirales; Inoviridae; Tertilicivirus.
DB of origin
REFSEQ
Length
5833
Host Name
Pseudomonas aeruginosa
Host domain
Bacteria
Is prophage?
undef
Number of proteins
9
%GC
45.36
Number of singletons
4
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
NP_040656.1 NC_001418_p6 hypothetical protein phrog_197 Zot-like toxin moron, auxiliary metabolic gene and host takeover 1 3449 4354
NP_040658.1 NC_001418_p8 hypothetical protein singleton unknown function unknown function 1 5301 5516
NP_040659.1 NC_001418_p9 ssDNA-binding protein phrog_2866 single strand DNA binding protein DNA, RNA and nucleotide metabolism 1 5527 5763
NP_040653.1 NC_001418_p3 50-kDa virion protein singleton unknown function unknown function 1 362 1813
NP_040651.1 NC_001418_p1 hypothetical protein phrog_9110 unknown function unknown function 1 1 106
NP_040651.1 NC_001418_p1 hypothetical protein phrog_9110 unknown function unknown function 1 5763 5833
NP_040654.1 NC_001418_p4 minor coat protein phrog_1242 minor head protein head and packaging 1 1806 2087
NP_040655.1 NC_001418_p5 phage assembly protein phrog_1012 assembly (protein IV of M13) head and packaging 1 2084 3376
NP_040657.1 NC_001418_p7 hypothetical protein singleton unknown function unknown function 1 4468 5304
NP_040652.1 NC_001418_p2 major coat protein singleton unknown function unknown function 1 120 254