| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_001604 |
Definition |
Enterobacteria phage T7, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Autographiviridae; Studiervirinae; Teseptimavirus; Escherichia virus T7. |
DB of origin |
REFSEQ |
Length |
39937 |
Host Name |
Escherichia coli |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
60 |
%GC |
48.39 |
Number of singletons |
0 |
Number of paralogs |
4 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| NP_041969.1 | NC_001604_p16 | inhibitor of host bacterial RNA polymerase | phrog_1307 | RNA polymerase inhibitor | DNA, RNA and nucleotide metabolism | 1 | 8898 | 9092 |
| NP_042002.1 | NC_001604_p49 | internal virion protein B | phrog_805 | internal virion protein | head and packaging | 1 | 27728 | 28318 |
| NP_042007.1 | NC_001604_p54 | DNA packaging protein, small subunit | phrog_1351 | terminase small subunit | head and packaging | 1 | 36553 | 36822 |
| NP_041967.1 | NC_001604_p14 | hypothetical protein | phrog_2585 | nucleotide kinase | other | 1 | 8166 | 8756 |
| NP_041958.1 | NC_001604_p5 | hypothetical protein | phrog_8393 | unknown function | unknown function | 1 | 1636 | 1797 |
| NP_041975.1 | NC_001604_p22 | DNA primase/helicase | phrog_239 | DNA primase/helicase | DNA, RNA and nucleotide metabolism | 1 | 11565 | 13265 |
| NP_041957.1 | NC_001604_p4 | hypothetical protein | phrog_8393 | unknown function | unknown function | 1 | 1636 | 1972 |
| NP_041997.1 | NC_001604_p44 | major capsid protein | phrog_267 | major head protein | head and packaging | 1 | 22967 | 24162 |
| NP_041978.1 | NC_001604_p25 | hypothetical protein | phrog_5140 | unknown function | unknown function | 1 | 12988 | 13326 |
| NP_041991.1 | NC_001604_p38 | hypothetical protein | phrog_1391 | unknown function | unknown function | 1 | 18864 | 19130 |
| NP_041993.1 | NC_001604_p40 | tail assembly protein | phrog_1320 | host range and adsorption protein | moron, auxiliary metabolic gene and host takeover | 1 | 19535 | 19834 |
| NP_041981.1 | NC_001604_p28 | hypothetical protein | phrog_4023 | unknown function | unknown function | 1 | 13927 | 14334 |
| NP_041959.1 | NC_001604_p6 | protein kinase | phrog_2828 | serine-threonine kinase | other | 1 | 2021 | 3100 |
| NP_042003.1 | NC_001604_p50 | internal virion protein C | phrog_1339 | internal virion protein | head and packaging | 1 | 28325 | 30568 |
| NP_041989.1 | NC_001604_p36 | hypothetical protein | phrog_11345 | unknown function | unknown function | 1 | 18394 | 18507 |
| NP_041976.1 | NC_001604_p23 | hypothetical protein | phrog_20075 | unknown function | unknown function | 1 | 11635 | 11757 |
| NP_041968.1 | NC_001604_p15 | hypothetical protein | phrog_1312 | unknown function | unknown function | 1 | 8749 | 8895 |
| NP_041961.1 | NC_001604_p8 | hypothetical protein | phrog_2490 | unknown function | unknown function | 1 | 6007 | 6135 |
| NP_041995.1 | NC_001604_p42 | head-tail connector protein | phrog_449 | head-tail adaptor | connector | 1 | 20240 | 21850 |
| NP_041977.1 | NC_001604_p24 | helicase | phrog_239 | DNA primase/helicase | DNA, RNA and nucleotide metabolism | 1 | 11754 | 13265 |
| NP_042000.1 | NC_001604_p47 | tail tubular protein B | phrog_457 | tail protein | tail | 1 | 24842 | 27226 |
| NP_041990.1 | NC_001604_p37 | hypothetical protein | phrog_1447 | unknown function | unknown function | 1 | 18605 | 18859 |
| NP_041954.1 | NC_001604_p1 | hypothetical protein | phrog_2568 | ocr-like anti-restriction | moron, auxiliary metabolic gene and host takeover | 1 | 925 | 1278 |
| NP_042005.1 | NC_001604_p52 | tail fiber protein | phrog_4242 | tail fiber protein | tail | 1 | 34624 | 36285 |
| NP_041984.1 | NC_001604_p31 | hypothetical protein | phrog_17900 | unknown function | unknown function | 1 | 16851 | 17359 |
| NP_041998.1 | NC_001604_p45 | major capsid protein | phrog_267 | major head protein | head and packaging | 1 | 22967 | 24004 |
| NP_042013.1 | NC_001604_p60 | hypothetical protein | phrog_2193 | unknown function | unknown function | 1 | 39389 | 39538 |
| NP_041974.1 | NC_001604_p21 | NHN endonuclease | phrog_4578 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 11225 | 11590 |
| NP_041955.1 | NC_001604_p2 | hypothetical protein | phrog_7202 | unknown function | unknown function | 1 | 1278 | 1433 |
| NP_041971.1 | NC_001604_p18 | hypothetical protein | phrog_59 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 9857 | 10276 |
| NP_041973.1 | NC_001604_p20 | lysozyme | phrog_822 | amidase | lysis | 1 | 10706 | 11161 |
| NP_041996.1 | NC_001604_p43 | capsid assembly protein | phrog_1052 | head assembly | head and packaging | 1 | 21950 | 22873 |
| NP_041994.1 | NC_001604_p41 | hypothetical protein | phrog_59 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 19848 | 20240 |
| NP_041970.1 | NC_001604_p17 | single-stranded DNA-binding protein | phrog_112 | Gp2.5-like ssDNA binding protein and ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 9158 | 9856 |
| NP_041986.1 | NC_001604_p33 | hypothetical protein | phrog_1334 | unknown function | unknown function | 1 | 17150 | 17359 |
| NP_042011.1 | NC_001604_p58 | hypothetical protein | phrog_8982 | unknown function | unknown function | 1 | 38016 | 38273 |
| NP_041964.1 | NC_001604_p11 | hypothetical protein | phrog_17655 | unknown function | unknown function | 1 | 7608 | 7763 |
| NP_041966.1 | NC_001604_p13 | hypothetical protein | phrog_1777 | unknown function | unknown function | 1 | 7906 | 8166 |
| NP_041972.1 | NC_001604_p19 | endonuclease I | phrog_945 | endonuclease | DNA, RNA and nucleotide metabolism | 1 | 10257 | 10706 |
| NP_041960.1 | NC_001604_p7 | T3/T7-like RNA polymerase | phrog_414 | RNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 3171 | 5822 |
| NP_041983.1 | NC_001604_p30 | hypothetical protein | phrog_5018 | unknown function | unknown function | 1 | 16483 | 16839 |
| NP_041963.1 | NC_001604_p10 | ATP-dependent DNA ligase | phrog_114 | ATP-dependent DNA ligase | DNA, RNA and nucleotide metabolism | 1 | 6475 | 7554 |
| NP_042006.1 | NC_001604_p53 | type II holin | phrog_920 | holin | lysis | 1 | 36344 | 36547 |
| NP_041979.1 | NC_001604_p26 | hypothetical protein | phrog_1950 | unknown function | unknown function | 1 | 13352 | 13564 |
| NP_041988.1 | NC_001604_p35 | exonuclease | phrog_107 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 17504 | 18406 |
| NP_041999.1 | NC_001604_p46 | tail tubular protein A | phrog_446 | tail protein | tail | 1 | 24228 | 24818 |
| NP_042012.1 | NC_001604_p59 | hypothetical protein | phrog_8173 | unknown function | unknown function | 1 | 38553 | 38726 |
| NP_041987.1 | NC_001604_p34 | host recBCD nuclease inhibitor | phrog_9014 | Gp5.9-like inihibitor of recBCD nuclease | moron, auxiliary metabolic gene and host takeover | 1 | 17359 | 17517 |
| NP_041992.1 | NC_001604_p39 | hypothetical protein | phrog_2746 | host range and adsorption protein | moron, auxiliary metabolic gene and host takeover | 1 | 19130 | 19531 |
| NP_042010.1 | NC_001604_p57 | DNA maturation protein | phrog_38 | terminase large subunit | head and packaging | 1 | 37370 | 39130 |
| NP_041985.1 | NC_001604_p32 | host protein H-NS-interacting protein | phrog_1452 | Gp5.5-like host HNS inhibition | moron, auxiliary metabolic gene and host takeover | 1 | 16851 | 17150 |
| NP_041965.1 | NC_001604_p12 | hypothetical protein | phrog_12128 | unknown function | unknown function | 1 | 7791 | 7880 |
| NP_041962.1 | NC_001604_p9 | host dGTPase inhibitor | phrog_2949 | dGTPase inhibitor; target for F exclusion | other | 1 | 6137 | 6394 |
| NP_042001.1 | NC_001604_p48 | internal virion protein A | phrog_308 | internal virion protein | head and packaging | 1 | 27307 | 27723 |
| NP_041956.1 | NC_001604_p3 | hypothetical protein | phrog_16572 | unknown function | unknown function | 1 | 1496 | 1639 |
| NP_042008.1 | NC_001604_p55 | phage lambda Rz-like lysis protein | phrog_1327 | Rz-like spanin | lysis | 1 | 36917 | 37348 |
| NP_041980.1 | NC_001604_p27 | hypothetical protein | phrog_2254 | unknown function | unknown function | 1 | 13584 | 13853 |
| NP_041982.1 | NC_001604_p29 | DNA polymerase | phrog_17 | DNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 14353 | 16467 |
| NP_042004.1 | NC_001604_p51 | internal virion protein D | phrog_342 | internal virion protein with endolysin domain | head and packaging | 1 | 30595 | 34551 |
| NP_042009.1 | NC_001604_p56 | phage lambda Rz1-like protein | phrog_4306 | Rz-like spanin | lysis | 1 | 37032 | 37283 |