Genomic map of Bacillus virus SPbeta (NC_001884)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_001884
Definition
Bacillus phage SPBc2, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Spbetavirus.
DB of origin
REFSEQ
Length
134416
Host Name
Bacillus subtilis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
185
%GC
34.63
Number of singletons
30
Number of paralogs
5

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
NP_046723.1 NC_001884_p171 hypothetical protein singleton unknown function unknown function 1 129734 129799
NP_046585.1 NC_001884_p33 immunity protein d phrog_27819 unknown function unknown function -1 37349 38032
NP_046590.1 NC_001884_p38 hypothetical protein phrog_7383 unknown function unknown function -1 41719 42219
NP_046724.1 NC_001884_p172 small acid-soluble spore protein C phrog_10367 unknown function unknown function -1 129990 130208
NP_046675.1 NC_001884_p123 hypothetical protein phrog_25134 unknown function unknown function 1 98334 98630
NP_046641.1 NC_001884_p89 hypothetical protein phrog_3 transcriptional repressor transcription regulation -1 82446 82670
NP_046634.1 NC_001884_p82 hypothetical protein phrog_20687 unknown function unknown function 1 77469 77594
NP_046722.1 NC_001884_p170 hypothetical protein phrog_24594 unknown function unknown function 1 129337 129690
NP_046666.1 NC_001884_p114 hypothetical protein phrog_28179 unknown function unknown function 1 92049 92396
NP_046627.1 NC_001884_p75 hypothetical protein phrog_21020 unknown function unknown function 1 73953 74204
NP_046679.1 NC_001884_p127 hypothetical protein phrog_2367 unknown function unknown function 1 100031 100945
NP_046647.1 NC_001884_p95 hypothetical protein phrog_22862 unknown function unknown function 1 84466 84744
NP_046690.1 NC_001884_p138 hypothetical protein phrog_18253 unknown function unknown function 1 112336 112491
NP_046719.1 NC_001884_p167 hypothetical protein phrog_33268 unknown function unknown function -1 127763 128008
NP_046664.1 NC_001884_p112 hypothetical protein phrog_5412 unknown function unknown function 1 91390 91731
NP_046594.1 NC_001884_p42 hypothetical protein phrog_27434 unknown function unknown function -1 44037 44393
NP_046686.1 NC_001884_p134 hypothetical protein phrog_18207 unknown function unknown function 1 110881 111597
NP_046652.1 NC_001884_p100 antirepressor phrog_63 anti-repressor Ant transcription regulation 1 86114 86869
NP_046559.1 NC_001884_p7 hypothetical protein singleton unknown function unknown function 1 6774 7847
NP_046678.1 NC_001884_p126 hypothetical protein phrog_15690 unknown function unknown function 1 99638 100009
NP_046714.1 NC_001884_p162 hypothetical protein phrog_86 ribonucleoside diphosphate reductase small subunit DNA, RNA and nucleotide metabolism 1 124669 126466
NP_046685.1 NC_001884_p133 DNA polymerase phrog_405 DNA polymerase DNA, RNA and nucleotide metabolism 1 106936 110853
NP_046655.1 NC_001884_p103 hypothetical protein phrog_27461 unknown function unknown function 1 87344 87601
NP_046733.1 NC_001884_p181 hypothetical protein singleton unknown function unknown function 1 132795 133007
NP_046619.1 NC_001884_p67 hypothetical protein singleton unknown function unknown function 1 66489 66665
NP_046566.1 NC_001884_p14 hypothetical protein phrog_27254 unknown function unknown function 1 13559 13915
NP_046657.1 NC_001884_p105 hypothetical protein singleton unknown function unknown function 1 88185 88379
NP_046576.1 NC_001884_p24 hypothetical protein phrog_263 holin lysis -1 21280 21546
NP_046582.1 NC_001884_p30 YomG phrog_6211 minor tail protein tail -1 26990 29617
NP_046637.1 NC_001884_p85 hypothetical protein phrog_3 transcriptional repressor transcription regulation 1 78489 78701
NP_046578.1 NC_001884_p26 N-acetylmuramoyl-L-alanine amidase phrog_2338 endolysin lysis -1 21857 22960
NP_046602.1 NC_001884_p50 hypothetical protein phrog_14090 unknown function unknown function -1 48248 48643
NP_046692.1 NC_001884_p140 hypothetical protein phrog_420 unknown function unknown function 1 112997 113515
NP_046661.1 NC_001884_p109 hypothetical protein phrog_11880 unknown function unknown function -1 90185 90463
NP_046614.1 NC_001884_p62 histone-like prokaryotic DNA-binding protein family phrog_379 DNA binding protein DNA, RNA and nucleotide metabolism -1 60834 61112
NP_046624.1 NC_001884_p72 hypothetical protein phrog_3 transcriptional repressor transcription regulation 1 71250 71477
NP_046609.1 NC_001884_p57 hypothetical protein phrog_3314 unknown function unknown function -1 55541 56461
NP_046558.1 NC_001884_p6 DNase/RNase endonuclease phrog_20876 nuclease DNA, RNA and nucleotide metabolism -1 5582 6472
NP_046651.1 NC_001884_p99 hypothetical protein phrog_25201 unknown function unknown function 1 85666 86073
NP_046560.1 NC_001884_p8 hypothetical protein phrog_36924 unknown function unknown function 1 8371 8928
NP_046587.1 NC_001884_p35 hypothetical protein singleton unknown function unknown function 1 39107 39793
NP_046703.1 NC_001884_p151 hypothetical protein phrog_19492 unknown function unknown function 1 117576 117971
NP_046583.1 NC_001884_p31 hypothetical protein phrog_33 distal tail protein Dit tail -1 29629 30387
NP_046629.1 NC_001884_p77 hypothetical protein phrog_24739 unknown function unknown function 1 74434 74565
NP_046606.1 NC_001884_p54 hypothetical protein phrog_3313 unknown function unknown function -1 50780 52216
NP_046710.1 NC_001884_p158 hypothetical protein phrog_35028 unknown function unknown function 1 119834 120034
NP_046649.1 NC_001884_p97 hypothetical protein phrog_21095 unknown function unknown function 1 84974 85324
NP_046572.1 NC_001884_p20 ABC transporter phrog_2392 ABC transporter moron, auxiliary metabolic gene and host takeover 1 16986 19103
NP_046612.1 NC_001884_p60 hypothetical protein phrog_284 exonuclease DNA, RNA and nucleotide metabolism -1 57727 58944
NP_046736.1 NC_001884_p184 hypothetical protein phrog_843 Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 133595 134182
NP_046706.1 NC_001884_p154 hypothetical protein singleton unknown function unknown function 1 118515 118877
NP_046658.1 NC_001884_p106 hypothetical protein phrog_289 GTP-binding domain other 1 88590 89105
NP_046697.1 NC_001884_p145 hypothetical protein phrog_20499 unknown function unknown function 1 115716 115943
NP_046712.1 NC_001884_p160 hypothetical protein phrog_883 flavodoxin moron, auxiliary metabolic gene and host takeover 1 120481 120870
NP_046574.1 NC_001884_p22 hypothetical protein phrog_13126 beta-1,4-glycosyltransferase moron, auxiliary metabolic gene and host takeover 1 19513 20781
NP_046662.1 NC_001884_p110 hypothetical protein phrog_18829 unknown function unknown function 1 90667 90885
NP_046648.1 NC_001884_p96 hypothetical protein phrog_22079 unknown function unknown function 1 84758 84961
NP_046737.1 NC_001884_p185 hypothetical protein singleton unknown function unknown function 1 134185 134361
NP_046656.1 NC_001884_p104 hypothetical protein singleton unknown function unknown function 1 87684 88136
NP_046618.1 NC_001884_p66 hypothetical protein phrog_3727 unknown function unknown function 1 65503 66114
NP_046586.1 NC_001884_p34 hypothetical protein singleton unknown function unknown function -1 38114 38560
NP_046581.1 NC_001884_p29 hypothetical protein phrog_11315 unknown function unknown function -1 26153 26974
NP_046626.1 NC_001884_p74 hypothetical protein singleton unknown function unknown function 1 72971 73366
NP_046643.1 NC_001884_p91 hypothetical protein phrog_24800 unknown function unknown function 1 83141 83338
NP_046593.1 NC_001884_p41 hypothetical protein phrog_3285 minor tail protein tail -1 42818 44035
NP_046579.1 NC_001884_p27 hypothetical protein phrog_681 endonuclease DNA, RNA and nucleotide metabolism -1 23188 24012
NP_046615.1 NC_001884_p63 hypothetical protein phrog_8308 unknown function unknown function -1 61356 63875
NP_046561.1 NC_001884_p9 hypothetical protein phrog_16816 unknown function unknown function 1 9028 10743
NP_046630.1 NC_001884_p78 ATP/GTP-binding protein singleton unknown function unknown function 1 74604 75140
NP_046671.1 NC_001884_p119 hypothetical protein phrog_19340 unknown function unknown function 1 94894 95115
NP_046734.1 NC_001884_p182 hypothetical protein phrog_34948 unknown function unknown function 1 133091 133276
NP_046660.1 NC_001884_p108 hypothetical protein phrog_1035 endonuclease VII DNA, RNA and nucleotide metabolism 1 89368 90060
NP_046693.1 NC_001884_p141 hypothetical protein singleton unknown function unknown function 1 113547 113666
NP_046631.1 NC_001884_p79 hypothetical protein phrog_23349 unknown function unknown function 1 75167 75700
NP_046707.1 NC_001884_p155 hypothetical protein phrog_20540 unknown function unknown function 1 118938 119408
NP_046640.1 NC_001884_p88 hypothetical protein phrog_5830 integrase integration and excision 1 81280 82257
NP_046611.1 NC_001884_p59 hypothetical protein phrog_28670 unknown function unknown function 1 57283 57693
NP_046720.1 NC_001884_p168 hypothetical protein phrog_21564 unknown function unknown function 1 128328 128618
NP_046676.1 NC_001884_p124 hypothetical protein phrog_20815 unknown function unknown function 1 98693 99073
NP_046726.1 NC_001884_p174 hypothetical protein phrog_30439 unknown function unknown function 1 131198 131389
NP_046667.1 NC_001884_p115 hypothetical protein phrog_35307 unknown function unknown function -1 92473 92622
NP_046705.1 NC_001884_p153 hypothetical protein singleton unknown function unknown function 1 118347 118472
NP_046598.1 NC_001884_p46 hypothetical protein phrog_4051 unknown function unknown function -1 46153 46863
NP_046650.1 NC_001884_p98 hypothetical protein phrog_19651 unknown function unknown function 1 85321 85659
NP_046681.1 NC_001884_p129 hypothetical protein phrog_4680 unknown function unknown function 1 102042 102512
NP_046562.1 NC_001884_p10 hypothetical protein singleton unknown function unknown function 1 10752 11249
NP_046668.1 NC_001884_p116 hypothetical protein phrog_14313 unknown function unknown function 1 92788 93201
NP_046677.1 NC_001884_p125 hypothetical protein singleton unknown function unknown function 1 99150 99464
NP_046696.1 NC_001884_p144 hypothetical protein phrog_20314 unknown function unknown function 1 115311 115676
NP_046689.1 NC_001884_p137 hypothetical protein phrog_17474 unknown function unknown function 1 112128 112343
NP_046617.1 NC_001884_p65 SPbeta phage repressor phrog_8 transcriptional regulator transcription regulation 1 65062 65388
NP_046568.1 NC_001884_p16 hypothetical protein phrog_3352 unknown function unknown function 1 14467 14799
NP_046584.1 NC_001884_p32 transglycosylase phrog_4211 tail length tape measure protein tail -1 30438 37295
NP_046599.1 NC_001884_p47 hypothetical protein phrog_9587 unknown function unknown function -1 46860 47366
NP_046639.1 NC_001884_p87 hypothetical protein phrog_5732 unknown function unknown function 1 79874 81256
NP_046589.1 NC_001884_p37 hypothetical protein phrog_19892 unknown function unknown function -1 41316 41735
NP_046577.1 NC_001884_p25 possibly involved in bacteriocin production or immunity phrog_2429 involved in bacteriocin production or immunity moron, auxiliary metabolic gene and host takeover -1 21557 21769
NP_046730.1 NC_001884_p178 hypothetical protein phrog_24445 unknown function unknown function 1 131864 132181
NP_046683.1 NC_001884_p131 hypothetical protein phrog_47 DNA primase DNA, RNA and nucleotide metabolism 1 104057 105193
NP_046695.1 NC_001884_p143 hypothetical protein phrog_21689 unknown function unknown function 1 115090 115308
NP_046636.1 NC_001884_p84 hypothetical protein phrog_31968 unknown function unknown function 1 78124 78441
NP_046646.1 NC_001884_p94 hypothetical protein phrog_98 unknown function unknown function 1 84065 84469
NP_046688.1 NC_001884_p136 hypothetical protein phrog_19862 unknown function unknown function 1 111898 112095
NP_046604.1 NC_001884_p52 hypothetical protein phrog_12438 virion structural protein head and packaging -1 49164 50180
NP_046633.1 NC_001884_p81 hypothetical protein phrog_1728 transcriptional regulator transcription regulation 1 76295 77455
NP_046596.1 NC_001884_p44 hypothetical protein phrog_22551 unknown function unknown function -1 44684 45295
NP_046571.1 NC_001884_p19 lipoprotein singleton unknown function unknown function 1 16758 16928
NP_046597.1 NC_001884_p45 hypothetical protein phrog_2729 virion structural protein head and packaging -1 45313 46110
NP_046628.1 NC_001884_p76 hypothetical protein phrog_20866 unknown function unknown function 1 74208 74423
NP_046564.1 NC_001884_p12 hypothetical protein phrog_1249 acetyltransferase other 1 11927 12460
NP_046569.1 NC_001884_p17 IMPB/MUCB/SAMB family protein phrog_1268 DNA polymerase DNA, RNA and nucleotide metabolism 1 14792 16042
NP_046608.1 NC_001884_p56 hypothetical protein phrog_2 terminase large subunit head and packaging -1 53785 55554
NP_046595.1 NC_001884_p43 hypothetical protein phrog_26023 unknown function unknown function -1 44457 44684
NP_046601.1 NC_001884_p49 hypothetical protein phrog_25075 unknown function unknown function -1 47997 48251
NP_046687.1 NC_001884_p135 hypothetical protein phrog_21730 unknown function unknown function 1 111713 111862
NP_046600.1 NC_001884_p48 hypothetical protein phrog_24208 unknown function unknown function -1 47363 48013
NP_046575.1 NC_001884_p23 disulfide oxidoreductase singleton unknown function unknown function 1 20778 21224
NP_046591.1 NC_001884_p39 hypothetical protein phrog_134 unknown function unknown function -1 42269 42460
NP_046708.1 NC_001884_p156 hypothetical protein singleton unknown function unknown function 1 119440 119574
NP_046654.1 NC_001884_p102 hypothetical protein phrog_30949 unknown function unknown function 1 87096 87299
NP_046711.1 NC_001884_p159 hypothetical protein phrog_21769 unknown function unknown function 1 120122 120475
NP_046638.1 NC_001884_p86 hypothetical protein phrog_1 integrase integration and excision 1 78691 79767
NP_046674.1 NC_001884_p122 hypothetical protein phrog_2234 tail spike protein tail 1 96485 98245
NP_046553.1 NC_001884_p1 site-specific recombinase phrog_95 integrase integration and excision -1 41 1678
NP_046645.1 NC_001884_p93 hypothetical protein phrog_19476 unknown function unknown function 1 83733 84068
NP_046673.1 NC_001884_p121 hypothetical protein phrog_4175 poly-gamma-glutamate hydrolase other 1 95664 96488
NP_046625.1 NC_001884_p73 hypothetical protein phrog_7835 unknown function unknown function 1 71585 72913
NP_046644.1 NC_001884_p92 hypothetical protein phrog_26971 unknown function unknown function 1 83450 83644
NP_046691.1 NC_001884_p139 hypothetical protein phrog_761 thymidylate kinase other 1 112491 112988
NP_046610.1 NC_001884_p58 hypothetical protein phrog_31869 unknown function unknown function -1 56564 57064
NP_046663.1 NC_001884_p111 hypothetical protein phrog_26275 unknown function unknown function -1 90902 91276
NP_046563.1 NC_001884_p11 hypothetical protein phrog_25556 unknown function unknown function 1 11313 11891
NP_046721.1 NC_001884_p169 hypothetical protein singleton unknown function unknown function 1 128765 129106
NP_046659.1 NC_001884_p107 hypothetical protein phrog_33282 unknown function unknown function 1 89125 89328
NP_046717.1 NC_001884_p165 dUTPase phrog_135 dUTPase DNA, RNA and nucleotide metabolism 1 126751 127179
NP_046735.1 NC_001884_p183 hypothetical protein phrog_3 transcriptional repressor transcription regulation -1 133278 133520
NP_046616.1 NC_001884_p64 hypothetical protein phrog_20387 unknown function unknown function -1 63915 64109
NP_046588.1 NC_001884_p36 hypothetical protein phrog_1 integrase integration and excision -1 40301 41302
NP_046665.1 NC_001884_p113 hypothetical protein phrog_32163 unknown function unknown function 1 91691 92047
NP_046684.1 NC_001884_p132 ss-DNA-specific endonuclease phrog_2484 RecJ-like ssDNA exonuclease DNA, RNA and nucleotide metabolism 1 105193 106923
NP_046701.1 NC_001884_p149 hypothetical protein phrog_36768 unknown function unknown function 1 116771 116950
NP_046715.1 NC_001884_p163 hypothetical protein phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism 1 125361 125882
NP_046557.1 NC_001884_p5 hypothetical protein phrog_10524 unknown function unknown function -1 5086 5568
NP_046718.1 NC_001884_p166 hypothetical protein phrog_35917 unknown function unknown function 1 127274 127723
NP_046716.1 NC_001884_p164 thioredoxin phrog_22 thioredoxin domain DNA, RNA and nucleotide metabolism 1 126463 126705
NP_046670.1 NC_001884_p118 hypothetical protein phrog_1599 unknown function unknown function -1 94149 94823
NP_046570.1 NC_001884_p18 hypothetical protein singleton unknown function unknown function 1 16144 16461
NP_046727.1 NC_001884_p175 hypothetical protein phrog_29191 unknown function unknown function 1 131429 131560
NP_046622.1 NC_001884_p70 hypothetical protein singleton unknown function unknown function 1 68810 69316
NP_046620.1 NC_001884_p68 hypothetical protein phrog_20584 unknown function unknown function 1 66980 67168
NP_046580.1 NC_001884_p28 hypothetical protein phrog_31144 unknown function unknown function -1 24182 26116
NP_046573.1 NC_001884_p21 thioredoxin phrog_22 thioredoxin domain DNA, RNA and nucleotide metabolism 1 19100 19513
NP_046680.1 NC_001884_p128 ATP/GTP binding protein phrog_124 Sak4-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 101028 101999
NP_046635.1 NC_001884_p83 hypothetical protein phrog_23684 unknown function unknown function 1 77921 78121
NP_046732.1 NC_001884_p180 hypothetical protein phrog_37006 unknown function unknown function 1 132367 132729
NP_046702.1 NC_001884_p150 hypothetical protein singleton unknown function unknown function 1 116995 117537
NP_046694.1 NC_001884_p142 modification methylase phrog_116 DNA methyltransferase other 1 113715 115046
NP_046554.1 NC_001884_p2 lipoprotein singleton unknown function unknown function 1 1881 2591
NP_046613.1 NC_001884_p61 hypothetical protein phrog_8651 unknown function unknown function -1 58961 59152
NP_046698.1 NC_001884_p146 hypothetical protein phrog_17058 unknown function unknown function 1 115956 116138
NP_046567.1 NC_001884_p15 hypothetical protein phrog_23288 unknown function unknown function -1 13958 14293
NP_046607.1 NC_001884_p55 hypothetical protein phrog_2739 portal protein head and packaging -1 52247 53767
NP_046669.1 NC_001884_p117 hypothetical protein phrog_114 ATP-dependent DNA ligase DNA, RNA and nucleotide metabolism -1 93267 94079
NP_046653.1 NC_001884_p101 hypothetical protein phrog_23490 unknown function unknown function 1 86923 87087
NP_046605.1 NC_001884_p53 hypothetical protein phrog_12284 virion structural protein head and packaging -1 50219 50755
NP_046731.1 NC_001884_p179 hypothetical protein phrog_36738 unknown function unknown function 1 132197 132370
NP_046713.1 NC_001884_p161 ribunucleotide reductase large subunit phrog_84 ribonucleoside-diphosphate reductase large subunit DNA, RNA and nucleotide metabolism 1 120833 124339
NP_046621.1 NC_001884_p69 hypothetical protein phrog_2467 unknown function unknown function 1 67250 68482
NP_046699.1 NC_001884_p147 hypothetical protein phrog_16644 unknown function unknown function 1 116205 116417
NP_046623.1 NC_001884_p71 hypothetical protein singleton unknown function unknown function 1 69673 70989
NP_046682.1 NC_001884_p130 replicative DNA helicase phrog_19 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism 1 102527 104041
NP_046729.1 NC_001884_p177 hypothetical protein phrog_31342 unknown function unknown function 1 131774 131851
NP_046555.1 NC_001884_p3 hypothetical protein singleton unknown function unknown function 1 2798 3313
NP_046672.1 NC_001884_p120 hypothetical protein phrog_25048 unknown function unknown function 1 95170 95565
NP_046592.1 NC_001884_p40 hypothetical protein phrog_1766 tail fiber protein tail -1 42457 42807
NP_046725.1 NC_001884_p173 hypothetical protein phrog_1649 metallo-phosphoesterase other 1 130327 131154
NP_046556.1 NC_001884_p4 hypothetical protein phrog_22826 unknown function unknown function -1 3964 4782
NP_046700.1 NC_001884_p148 hypothetical protein singleton unknown function unknown function -1 116521 116640
NP_046704.1 NC_001884_p152 hypothetical protein singleton unknown function unknown function 1 117986 118333
NP_046603.1 NC_001884_p51 hypothetical protein phrog_13303 unknown function unknown function -1 48658 49128
NP_046642.1 NC_001884_p90 hypothetical protein phrog_24087 unknown function unknown function 1 82853 83071
NP_046728.1 NC_001884_p176 hypothetical protein phrog_31797 unknown function unknown function 1 131596 131742
NP_046632.1 NC_001884_p80 hypothetical protein singleton unknown function unknown function 1 75702 76118
NP_046709.1 NC_001884_p157 hypothetical protein singleton unknown function unknown function 1 119595 119789
NP_046565.1 NC_001884_p13 hypothetical protein phrog_35721 unknown function unknown function 1 13086 13553