| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_001909 |
Definition |
Lactococcus phage bIL170, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Skunavirus. |
DB of origin |
REFSEQ |
Length |
31754 |
Host Name |
Lactococcus lactis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
64 |
%GC |
34.34 |
Number of singletons |
1 |
Number of paralogs |
3 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| NP_047164.1 | NC_001909_p51 | e9 | phrog_1632 | unknown function | unknown function | -1 | 26230 | 26520 |
| NP_047173.1 | NC_001909_p61 | m1 | phrog_1952 | unknown function | unknown function | 1 | 30152 | 30280 |
| NP_047146.1 | NC_001909_p33 | e27 | phrog_3365 | unknown function | unknown function | -1 | 20721 | 20909 |
| NP_047155.1 | NC_001909_p42 | e18 | phrog_10825 | unknown function | unknown function | -1 | 22878 | 23129 |
| NP_047134.1 | NC_001909_p21 | holin | phrog_1379 | unknown function | unknown function | 1 | 16459 | 16812 |
| NP_047118.1 | NC_001909_p5 | l5 | phrog_80 | head maturation protease | head and packaging | 1 | 3805 | 4341 |
| NP_047115.1 | NC_001909_p2 | terminase subunit | phrog_9 | terminase large subunit | head and packaging | 1 | 779 | 2401 |
| NP_047159.1 | NC_001909_p46 | e14 | phrog_1295 | unknown function | unknown function | -1 | 24296 | 24511 |
| NP_047144.1 | NC_001909_p31 | e29 | phrog_1820 | unknown function | unknown function | -1 | 20223 | 20411 |
| NP_047143.1 | NC_001909_p30 | e30 | phrog_1441 | unknown function | unknown function | -1 | 20056 | 20223 |
| NP_758453.1 | NC_001909_p59 | hypothetical protein | phrog_6866 | unknown function | unknown function | 1 | 29559 | 29717 |
| NP_047114.1 | NC_001909_p1 | terminase subunit | phrog_1437 | terminase small subunit | head and packaging | 1 | 254 | 778 |
| NP_047130.1 | NC_001909_p17 | l17 | phrog_1424 | tail protein | tail | 1 | 13338 | 14234 |
| NP_047132.1 | NC_001909_p19 | l19 | phrog_1434 | unknown function | unknown function | 1 | 15351 | 15644 |
| NP_047139.1 | NC_001909_p26 | e34 | phrog_5152 | unknown function | unknown function | -1 | 18998 | 19246 |
| NP_047168.1 | NC_001909_p55 | e5 | phrog_1284 | unknown function | unknown function | -1 | 27384 | 28334 |
| NP_047154.1 | NC_001909_p41 | e19 | phrog_4546 | unknown function | unknown function | -1 | 22768 | 22878 |
| NP_047137.1 | NC_001909_p24 | e36 | phrog_3874 | transglycosylase | other | -1 | 18086 | 18709 |
| NP_047126.1 | NC_001909_p13 | major structural protein | phrog_1433 | major tail protein | tail | 1 | 8839 | 9744 |
| NP_047160.1 | NC_001909_p47 | e13 | phrog_1278 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 24527 | 24886 |
| NP_047158.1 | NC_001909_p45 | e15 | phrog_1317 | unknown function | unknown function | -1 | 23790 | 24299 |
| NP_047119.1 | NC_001909_p6 | minor structural protein | phrog_1393 | minor head protein | head and packaging | 1 | 4334 | 5515 |
| NP_047140.1 | NC_001909_p27 | e33 | phrog_1430 | unknown function | unknown function | -1 | 19267 | 19536 |
| NP_047125.1 | NC_001909_p12 | accessory fiber | phrog_2370 | neck passage structure | connector | 1 | 6854 | 8815 |
| NP_047141.1 | NC_001909_p28 | e32 | phrog_3389 | unknown function | unknown function | -1 | 19533 | 19712 |
| NP_047162.1 | NC_001909_p49 | HNH homing endonuclease | phrog_59 | HNH endonuclease | DNA, RNA and nucleotide metabolism | -1 | 25523 | 26023 |
| NP_047170.1 | NC_001909_p57 | e3 | phrog_5487 | unknown function | unknown function | -1 | 28612 | 28782 |
| NP_047174.1 | NC_001909_p62 | m2 | phrog_1436 | unknown function | unknown function | 1 | 30285 | 30416 |
| NP_047123.1 | NC_001909_p10 | l10 | phrog_1484 | virion structural protein | head and packaging | 1 | 6103 | 6441 |
| NP_047133.1 | NC_001909_p20 | baseplate protein | phrog_6779 | tail protein | tail | 1 | 15634 | 16437 |
| NP_047157.1 | NC_001909_p44 | e16 | singleton | unknown function | unknown function | -1 | 23569 | 23793 |
| NP_047117.1 | NC_001909_p4 | portal protein | phrog_12 | portal protein | head and packaging | 1 | 2688 | 3824 |
| NP_047129.1 | NC_001909_p16 | tail tape measure protein | phrog_58 | tail length tape measure protein | tail | 1 | 10588 | 13338 |
| NP_047176.1 | NC_001909_p64 | m4 | phrog_1652 | unknown function | unknown function | 1 | 30892 | 31059 |
| NP_047175.1 | NC_001909_p63 | Holliday junction endonuclease | phrog_827 | Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 30413 | 30895 |
| NP_047128.1 | NC_001909_p15 | l15 | phrog_1421 | virion structural protein | head and packaging | 1 | 10076 | 10588 |
| NP_047127.1 | NC_001909_p14 | l14 | phrog_1420 | virion structural protein | head and packaging | 1 | 9781 | 10056 |
| NP_047142.1 | NC_001909_p29 | e31 | phrog_1415 | unknown function | unknown function | -1 | 19709 | 20056 |
| NP_047152.1 | NC_001909_p39 | e21 | phrog_36450 | unknown function | unknown function | -1 | 22233 | 22334 |
| NP_047151.1 | NC_001909_p38 | e22 | phrog_1083 | unknown function | unknown function | -1 | 21854 | 22177 |
| NP_047161.1 | NC_001909_p48 | e12 | phrog_659 | Sak-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | -1 | 24891 | 25526 |
| NP_047148.1 | NC_001909_p35 | e25 | phrog_5861 | unknown function | unknown function | -1 | 21258 | 21419 |
| NP_047165.1 | NC_001909_p52 | e8 | phrog_2228 | unknown function | unknown function | -1 | 26517 | 26894 |
| NP_047124.1 | NC_001909_p11 | l11 | phrog_1440 | virion structural protein | head and packaging | 1 | 6432 | 6797 |
| NP_047135.1 | NC_001909_p22 | lysin | phrog_670 | endolysin | lysis | 1 | 16809 | 17510 |
| NP_047169.1 | NC_001909_p56 | e4 | phrog_4505 | unknown function | unknown function | -1 | 28392 | 28577 |
| NP_047138.1 | NC_001909_p25 | e35 | phrog_5087 | unknown function | unknown function | -1 | 18712 | 18969 |
| NP_047131.1 | NC_001909_p18 | l18 | phrog_1432 | tail associated lysin | tail | 1 | 14234 | 15361 |
| NP_047136.1 | NC_001909_p23 | HNH homing endonuclease | phrog_59 | HNH endonuclease | DNA, RNA and nucleotide metabolism | -1 | 17616 | 18092 |
| NP_047156.1 | NC_001909_p43 | e17 | phrog_1919 | unknown function | unknown function | -1 | 23166 | 23480 |
| NP_047167.1 | NC_001909_p54 | e6 | phrog_3604 | unknown function | unknown function | -1 | 27182 | 27391 |
| NP_047171.1 | NC_001909_p58 | e2 | phrog_2413 | unknown function | unknown function | -1 | 29302 | 29421 |
| NP_047172.1 | NC_001909_p60 | e1 | phrog_1656 | unknown function | unknown function | -1 | 29834 | 30001 |
| NP_047149.1 | NC_001909_p36 | e24 | phrog_1225 | unknown function | unknown function | -1 | 21416 | 21724 |
| NP_047121.1 | NC_001909_p8 | l8 | phrog_1428 | head-tail connector protein | connector | 1 | 5536 | 5799 |
| NP_047153.1 | NC_001909_p40 | HNH homing endonuclease | phrog_59 | HNH endonuclease | DNA, RNA and nucleotide metabolism | -1 | 22345 | 22767 |
| NP_047150.1 | NC_001909_p37 | e23 | phrog_1508 | unknown function | unknown function | -1 | 21724 | 21843 |
| NP_047166.1 | NC_001909_p53 | e7 | phrog_1405 | unknown function | unknown function | -1 | 26947 | 27210 |
| NP_047145.1 | NC_001909_p32 | e28 | phrog_1509 | unknown function | unknown function | -1 | 20404 | 20658 |
| NP_047116.1 | NC_001909_p3 | HNH endonuclease | phrog_119 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 2391 | 2675 |
| NP_047163.1 | NC_001909_p50 | e10 | phrog_1449 | unknown function | unknown function | -1 | 26010 | 26276 |
| NP_047120.1 | NC_001909_p7 | minor structural protein | phrog_1393 | minor head protein | head and packaging | 1 | 4559 | 5515 |
| NP_047122.1 | NC_001909_p9 | l9 | phrog_1429 | virion structural protein | head and packaging | 1 | 5799 | 6113 |
| NP_047147.1 | NC_001909_p34 | e26 | phrog_6037 | unknown function | unknown function | -1 | 20983 | 21180 |