Genomic map of Lactococcus virus bIL170 (NC_001909)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_001909
Definition
Lactococcus phage bIL170, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Skunavirus.
DB of origin
REFSEQ
Length
31754
Host Name
Lactococcus lactis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
64
%GC
34.34
Number of singletons
1
Number of paralogs
3

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
NP_047164.1 NC_001909_p51 e9 phrog_1632 unknown function unknown function -1 26230 26520
NP_047173.1 NC_001909_p61 m1 phrog_1952 unknown function unknown function 1 30152 30280
NP_047146.1 NC_001909_p33 e27 phrog_3365 unknown function unknown function -1 20721 20909
NP_047155.1 NC_001909_p42 e18 phrog_10825 unknown function unknown function -1 22878 23129
NP_047134.1 NC_001909_p21 holin phrog_1379 unknown function unknown function 1 16459 16812
NP_047118.1 NC_001909_p5 l5 phrog_80 head maturation protease head and packaging 1 3805 4341
NP_047115.1 NC_001909_p2 terminase subunit phrog_9 terminase large subunit head and packaging 1 779 2401
NP_047159.1 NC_001909_p46 e14 phrog_1295 unknown function unknown function -1 24296 24511
NP_047144.1 NC_001909_p31 e29 phrog_1820 unknown function unknown function -1 20223 20411
NP_047143.1 NC_001909_p30 e30 phrog_1441 unknown function unknown function -1 20056 20223
NP_758453.1 NC_001909_p59 hypothetical protein phrog_6866 unknown function unknown function 1 29559 29717
NP_047114.1 NC_001909_p1 terminase subunit phrog_1437 terminase small subunit head and packaging 1 254 778
NP_047130.1 NC_001909_p17 l17 phrog_1424 tail protein tail 1 13338 14234
NP_047132.1 NC_001909_p19 l19 phrog_1434 unknown function unknown function 1 15351 15644
NP_047139.1 NC_001909_p26 e34 phrog_5152 unknown function unknown function -1 18998 19246
NP_047168.1 NC_001909_p55 e5 phrog_1284 unknown function unknown function -1 27384 28334
NP_047154.1 NC_001909_p41 e19 phrog_4546 unknown function unknown function -1 22768 22878
NP_047137.1 NC_001909_p24 e36 phrog_3874 transglycosylase other -1 18086 18709
NP_047126.1 NC_001909_p13 major structural protein phrog_1433 major tail protein tail 1 8839 9744
NP_047160.1 NC_001909_p47 e13 phrog_1278 single strand DNA binding protein DNA, RNA and nucleotide metabolism -1 24527 24886
NP_047158.1 NC_001909_p45 e15 phrog_1317 unknown function unknown function -1 23790 24299
NP_047119.1 NC_001909_p6 minor structural protein phrog_1393 minor head protein head and packaging 1 4334 5515
NP_047140.1 NC_001909_p27 e33 phrog_1430 unknown function unknown function -1 19267 19536
NP_047125.1 NC_001909_p12 accessory fiber phrog_2370 neck passage structure connector 1 6854 8815
NP_047141.1 NC_001909_p28 e32 phrog_3389 unknown function unknown function -1 19533 19712
NP_047162.1 NC_001909_p49 HNH homing endonuclease phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism -1 25523 26023
NP_047170.1 NC_001909_p57 e3 phrog_5487 unknown function unknown function -1 28612 28782
NP_047174.1 NC_001909_p62 m2 phrog_1436 unknown function unknown function 1 30285 30416
NP_047123.1 NC_001909_p10 l10 phrog_1484 virion structural protein head and packaging 1 6103 6441
NP_047133.1 NC_001909_p20 baseplate protein phrog_6779 tail protein tail 1 15634 16437
NP_047157.1 NC_001909_p44 e16 singleton unknown function unknown function -1 23569 23793
NP_047117.1 NC_001909_p4 portal protein phrog_12 portal protein head and packaging 1 2688 3824
NP_047129.1 NC_001909_p16 tail tape measure protein phrog_58 tail length tape measure protein tail 1 10588 13338
NP_047176.1 NC_001909_p64 m4 phrog_1652 unknown function unknown function 1 30892 31059
NP_047175.1 NC_001909_p63 Holliday junction endonuclease phrog_827 Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 30413 30895
NP_047128.1 NC_001909_p15 l15 phrog_1421 virion structural protein head and packaging 1 10076 10588
NP_047127.1 NC_001909_p14 l14 phrog_1420 virion structural protein head and packaging 1 9781 10056
NP_047142.1 NC_001909_p29 e31 phrog_1415 unknown function unknown function -1 19709 20056
NP_047152.1 NC_001909_p39 e21 phrog_36450 unknown function unknown function -1 22233 22334
NP_047151.1 NC_001909_p38 e22 phrog_1083 unknown function unknown function -1 21854 22177
NP_047161.1 NC_001909_p48 e12 phrog_659 Sak-like ssDNA annealing protein DNA, RNA and nucleotide metabolism -1 24891 25526
NP_047148.1 NC_001909_p35 e25 phrog_5861 unknown function unknown function -1 21258 21419
NP_047165.1 NC_001909_p52 e8 phrog_2228 unknown function unknown function -1 26517 26894
NP_047124.1 NC_001909_p11 l11 phrog_1440 virion structural protein head and packaging 1 6432 6797
NP_047135.1 NC_001909_p22 lysin phrog_670 endolysin lysis 1 16809 17510
NP_047169.1 NC_001909_p56 e4 phrog_4505 unknown function unknown function -1 28392 28577
NP_047138.1 NC_001909_p25 e35 phrog_5087 unknown function unknown function -1 18712 18969
NP_047131.1 NC_001909_p18 l18 phrog_1432 tail associated lysin tail 1 14234 15361
NP_047136.1 NC_001909_p23 HNH homing endonuclease phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism -1 17616 18092
NP_047156.1 NC_001909_p43 e17 phrog_1919 unknown function unknown function -1 23166 23480
NP_047167.1 NC_001909_p54 e6 phrog_3604 unknown function unknown function -1 27182 27391
NP_047171.1 NC_001909_p58 e2 phrog_2413 unknown function unknown function -1 29302 29421
NP_047172.1 NC_001909_p60 e1 phrog_1656 unknown function unknown function -1 29834 30001
NP_047149.1 NC_001909_p36 e24 phrog_1225 unknown function unknown function -1 21416 21724
NP_047121.1 NC_001909_p8 l8 phrog_1428 head-tail connector protein connector 1 5536 5799
NP_047153.1 NC_001909_p40 HNH homing endonuclease phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism -1 22345 22767
NP_047150.1 NC_001909_p37 e23 phrog_1508 unknown function unknown function -1 21724 21843
NP_047166.1 NC_001909_p53 e7 phrog_1405 unknown function unknown function -1 26947 27210
NP_047145.1 NC_001909_p32 e28 phrog_1509 unknown function unknown function -1 20404 20658
NP_047116.1 NC_001909_p3 HNH endonuclease phrog_119 HNH endonuclease DNA, RNA and nucleotide metabolism 1 2391 2675
NP_047163.1 NC_001909_p50 e10 phrog_1449 unknown function unknown function -1 26010 26276
NP_047120.1 NC_001909_p7 minor structural protein phrog_1393 minor head protein head and packaging 1 4559 5515
NP_047122.1 NC_001909_p9 l9 phrog_1429 virion structural protein head and packaging 1 5799 6113
NP_047147.1 NC_001909_p34 e26 phrog_6037 unknown function unknown function -1 20983 21180