Genomic map of Enterobacteria phage If1 (NC_001954)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_001954
Definition
Enterobacteria phage If1, complete genome.
Molecule type
ss-DNA
Genome structure
circular
Taxonomy
Viruses; Monodnaviria; Loebvirae; Hofneiviricota; Faserviricetes; Tubulavirales; Inoviridae; Infulavirus.
DB of origin
REFSEQ
Length
8454
Host Name
Escherichia coli
Host domain
Bacteria
Is prophage?
undef
Number of proteins
10
%GC
43.7
Number of singletons
1
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
NP_047358.1 NC_001954_p7 assembly protein phrog_1675 morphogenesis (protein I of M13) head and packaging 1 2502 3563
NP_047360.1 NC_001954_p9 hypothetical protein phrog_506 transposase integration and excision 1 6040 7086
NP_047353.1 NC_001954_p2 minor coat protein phrog_7781 minor coat protein head and packaging 1 294 392
NP_047354.1 NC_001954_p3 minor coat protein singleton virion structural protein head and packaging 1 389 487
NP_047352.1 NC_001954_p1 ss-DNA binding protein phrog_8473 single strand DNA binding protein DNA, RNA and nucleotide metabolism 1 1 291
NP_047359.1 NC_001954_p8 phage assembly protein phrog_1012 assembly (protein IV of M13) head and packaging 1 3544 4833
NP_047356.1 NC_001954_p5 attachment protein phrog_8482 attachment protein head and packaging 1 776 2158
NP_047361.1 NC_001954_p10 hypothetical protein phrog_702 replication protein DNA, RNA and nucleotide metabolism 1 7464 8432
NP_047355.1 NC_001954_p4 major coat protein phrog_1646 major coat protein head and packaging 1 484 708
NP_047357.1 NC_001954_p6 minor coat protein phrog_1944 minor head protein head and packaging 1 2161 2502