Genomic map of Vibrio phage fs2 (Vibrio cholerae filamentous bacteriophage fs-2) (NC_001956)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_001956
Definition
Vibrio phage fs2, complete genome.
Molecule type
ss-DNA
Genome structure
linear
Taxonomy
Viruses; Monodnaviria; Loebvirae; Hofneiviricota; Faserviricetes; Tubulavirales; Inoviridae; Saetivirus.
DB of origin
REFSEQ
Length
8651
Host Name
Vibrio cholerae
Host domain
Bacteria
Is prophage?
undef
Number of proteins
9
%GC
44.52
Number of singletons
0
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
NP_047364.1 NC_001956_p1 replication protein phrog_91 nicking at origin of replication DNA, RNA and nucleotide metabolism 1 288 2438
NP_047367.1 NC_001956_p4 minor coat protein phrog_31084 minor head protein head and packaging 1 2876 2992
NP_047368.1 NC_001956_p5 hypothetical protein phrog_1646 major coat protein head and packaging 1 3017 3238
NP_047370.1 NC_001956_p7 minor coat protein phrog_1944 minor head protein head and packaging 1 4820 5170
NP_047371.1 NC_001956_p8 assembly protein phrog_1675 morphogenesis (protein I of M13) head and packaging 1 5193 6278
NP_047372.1 NC_001956_p9 phage assembly protein phrog_1012 assembly (protein IV of M13) head and packaging 1 6259 7761
NP_047369.1 NC_001956_p6 hypothetical protein phrog_1698 minor head protein; receptor binding head and packaging 1 3317 4813
NP_047365.1 NC_001956_p2 hypothetical protein phrog_5738 single strand DNA binding protein DNA, RNA and nucleotide metabolism 1 2435 2749
NP_047366.1 NC_001956_p3 hypothetical protein phrog_7781 minor coat protein head and packaging 1 2760 2879