| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_002014 |
Definition |
Enterobacteria phage Ike, complete genome. |
Molecule type |
ss-DNA |
Genome structure |
circular |
Taxonomy |
Viruses; Monodnaviria; Loebvirae; Hofneiviricota; Faserviricetes; Tubulavirales; Inoviridae; Lineavirus. |
DB of origin |
REFSEQ |
Length |
6883 |
Host Name |
Escherichia coli |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
10 |
%GC |
40.54 |
Number of singletons |
0 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| NP_040571.1 | NC_002014_p2 | gene X product | phrog_8855 | replication protein | DNA, RNA and nucleotide metabolism | 1 | 907 | 1272 |
| NP_040572.1 | NC_002014_p3 | G V protein | phrog_1199 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 1296 | 1562 |
| NP_040574.1 | NC_002014_p5 | minor coat protein | phrog_28333 | minor head protein | head and packaging | 1 | 1654 | 1755 |
| NP_040573.1 | NC_002014_p4 | minor coat protein | phrog_19107 | minor head protein | head and packaging | 1 | 1559 | 1657 |
| NP_040575.1 | NC_002014_p6 | major coat protein | phrog_1646 | major coat protein | head and packaging | 1 | 1766 | 2014 |
| NP_040577.1 | NC_002014_p8 | minor coat protein | phrog_1944 | minor head protein | head and packaging | 1 | 3386 | 3736 |
| NP_040576.1 | NC_002014_p7 | attachment protein | phrog_4150 | virion structural protein | head and packaging | 1 | 2082 | 3386 |
| NP_040578.1 | NC_002014_p9 | assembly protein | phrog_1675 | morphogenesis (protein I of M13) | head and packaging | 1 | 3738 | 4835 |
| NP_040570.1 | NC_002014_p1 | replication initiation protein | phrog_702 | replication protein | DNA, RNA and nucleotide metabolism | 1 | 7 | 1272 |
| NP_040579.1 | NC_002014_p10 | phage assembly protein | phrog_1012 | assembly (protein IV of M13) | head and packaging | 1 | 4838 | 6151 |