Genomic map of Streptococcus virus DT1 (NC_002072)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_002072
Definition
Streptococcus phage DT1, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Moineauvirus.
DB of origin
REFSEQ
Length
34815
Host Name
Streptococcus thermophilus
Host domain
Bacteria
Is prophage?
undef
Number of proteins
45
%GC
39.07
Number of singletons
2
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
NP_049409.1 NC_002072_p19 hypothetical protein phrog_1060 unknown function unknown function 1 20327 20722
NP_049433.1 NC_002072_p44 hypothetical protein phrog_36 transcriptional regulator transcription regulation 1 33693 34091
NP_049394.1 NC_002072_p6 portal protein phrog_12 portal protein head and packaging 1 3185 4345
NP_049390.1 NC_002072_p2 hypothetical protein phrog_83 terminase small subunit head and packaging 1 601 1062
NP_049410.1 NC_002072_p20 hypothetical protein phrog_1567 unknown function unknown function 1 20729 20875
NP_049396.1 NC_002072_p8 major head protein phrog_10 major head protein head and packaging 1 5327 6208
NP_049393.1 NC_002072_p5 head-tail joining protein phrog_1142 unknown function unknown function 1 2988 3167
NP_597885.1 NC_002072_p26 hypothetical protein singleton unknown function unknown function 1 23160 23270
NP_049397.1 NC_002072_p9 DNA packaging protein phrog_40 head-tail adaptor Ad1 connector 1 6223 6537
NP_049389.1 NC_002072_p1 hypothetical protein singleton unknown function unknown function 1 304 474
NP_049428.1 NC_002072_p39 hypothetical protein phrog_1489 unknown function unknown function 1 31262 31417
NP_049434.1 NC_002072_p45 hypothetical protein phrog_144 HNH endonuclease DNA, RNA and nucleotide metabolism 1 34164 34721
NP_049412.1 NC_002072_p22 holin phrog_297 holin lysis 1 21224 21466
NP_049405.1 NC_002072_p16 tail component protein phrog_202 distal tail protein Dit tail 1 13941 15497
NP_049417.1 NC_002072_p28 cro-like regulatory protein phrog_3 transcriptional repressor transcription regulation 1 24033 24236
NP_049413.1 NC_002072_p23 lysin phrog_998 endolysin lysis 1 21468 22070
NP_049414.1 NC_002072_p24 hypothetical protein phrog_9496 endonuclease DNA, RNA and nucleotide metabolism 1 22277 22462
NP_049423.1 NC_002072_p34 hypothetical protein phrog_695 DNA polymerase/primase DNA, RNA and nucleotide metabolism 1 27742 28557
NP_049403.2 NC_002072_p15 tail component protein phrog_167 tail length tape measure protein tail 1 8974 13944
NP_049400.1 NC_002072_p12 tail component protein phrog_1217 tail protein tail 1 7321 7692
NP_049392.1 NC_002072_p4 terminase large subunit phrog_9 terminase large subunit head and packaging 1 1875 2984
NP_049411.1 NC_002072_p21 hypothetical protein phrog_1296 holin lysis 1 20893 21216
NP_049431.1 NC_002072_p42 hypothetical protein phrog_884 unknown function unknown function 1 32410 32712
NP_049402.1 NC_002072_p14 tail component protein phrog_1346 tail protein tail 1 8402 8755
NP_049391.1 NC_002072_p3 terminase small subunit phrog_4914 terminase large subunit head and packaging 1 1103 1792
NP_049422.1 NC_002072_p33 hypothetical protein phrog_378 single strand DNA binding protein DNA, RNA and nucleotide metabolism 1 27284 27739
NP_049429.1 NC_002072_p40 hypothetical protein phrog_5513 unknown function unknown function 1 31546 31758
NP_049430.1 NC_002072_p41 hypothetical protein phrog_1994 DNA binding protein DNA, RNA and nucleotide metabolism 1 31938 32435
NP_049416.1 NC_002072_p27 hypothetical protein phrog_4964 unknown function unknown function 1 23296 23847
NP_049432.1 NC_002072_p43 hypothetical protein phrog_1814 unknown function unknown function 1 32709 33416
NP_049407.2 NC_002072_p18 hypothetical protein phrog_372 tail protein tail 1 18244 20301
NP_049426.1 NC_002072_p37 hypothetical protein phrog_93 endonuclease DNA, RNA and nucleotide metabolism 1 30725 31048
NP_049406.1 NC_002072_p17 tail-host specificity protein phrog_588 tail fiber protein and host specificity tail 1 15497 18241
NP_049427.1 NC_002072_p38 hypothetical protein phrog_1982 unknown function unknown function 1 31029 31277
NP_049415.2 NC_002072_p25 hypothetical protein phrog_4238 endolysin lysis 1 22529 22756
NP_049418.1 NC_002072_p29 hypothetical protein phrog_1022 unknown function unknown function 1 24507 24647
NP_049398.1 NC_002072_p10 head-tail joining protein phrog_25 head closure Hc1 connector 1 6537 6887
NP_049421.1 NC_002072_p32 helicase phrog_16 DNA helicase DNA, RNA and nucleotide metabolism 1 25946 27277
NP_049425.1 NC_002072_p36 hypothetical protein phrog_9118 unknown function unknown function 1 30312 30743
NP_049420.1 NC_002072_p31 hypothetical protein phrog_124 Sak4-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 25270 25971
NP_049395.1 NC_002072_p7 scaffolding protein phrog_94 head maturation protease head and packaging 1 4332 5000
NP_049399.1 NC_002072_p11 tail component protein phrog_5 tail completion or Neck1 protein connector 1 6894 7316
NP_049401.1 NC_002072_p13 major tail protein phrog_88 major tail protein tail 1 7715 8326
NP_049419.1 NC_002072_p30 hypothetical protein phrog_4084 unknown function unknown function 1 24909 25223
NP_049424.1 NC_002072_p35 primase phrog_864 DNA primase DNA, RNA and nucleotide metabolism 1 28544 30058