Genomic map of Escherichia virus HK022 (HK022) (NC_002166)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_002166
Definition
Bacteriophage HK022, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Hendrixvirus.
DB of origin
REFSEQ
Length
40751
Host Name
Escherichia coli
Host domain
Bacteria
Is prophage?
undef
Number of proteins
35
%GC
49.48
Number of singletons
2
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
NP_037665.1 NC_002166_p4 head maturation protease phrog_80 head maturation protease head and packaging 1 3348 4025
NP_037694.1 NC_002166_p33 regulatory protein Q phrog_127 anti-termination protein Q-like transcription regulation 1 36211 36834
NP_037696.1 NC_002166_p35 lysin phrog_90 endolysin lysis 1 37574 38050
NP_037668.1 NC_002166_p7 head-tail adaptor phrog_25 head closure Hc1 connector 1 5545 5781
NP_037667.1 NC_002166_p6 hypothetical protein phrog_40 head-tail adaptor Ad1 connector 1 5219 5545
NP_037672.1 NC_002166_p11 hypothetical protein phrog_78 tail terminator connector 1 6838 7203
NP_037685.1 NC_002166_p24 cor protein phrog_1119 Cor superinfection exclusion protein moron, auxiliary metabolic gene and host takeover 1 18738 18971
NP_037675.1 NC_002166_p14 lambdaanalog phrog_337 tail protein tail 1 8129 8458
NP_037664.1 NC_002166_p3 head portal protein phrog_12 portal protein head and packaging 1 2056 3330
NP_037687.1 NC_002166_p26 excisionase phrog_629 excisionase integration and excision -1 21775 21993
NP_037671.1 NC_002166_p10 hypothetical protein phrog_5 tail completion or Neck1 protein connector 1 6302 6841
NP_037690.1 NC_002166_p29 essential recombination function protein Erf phrog_155 Erf-like ssDNA annealing protein DNA, RNA and nucleotide metabolism -1 25293 25898
NP_037673.1 NC_002166_p12 major tail subunit phrog_158 major tail protein tail 1 7258 7758
NP_037679.1 NC_002166_p18 hypothetical protein phrog_30 minor tail protein tail 1 11990 12700
NP_037678.1 NC_002166_p17 hypothetical protein phrog_18 minor tail protein tail 1 11233 11988
NP_037695.1 NC_002166_p34 holin phrog_126 holin/anti-holin lysis 1 37267 37590
NP_037663.1 NC_002166_p2 terminase large subunit phrog_9 terminase large subunit head and packaging 1 542 2056
NP_037688.1 NC_002166_p27 hypothetical protein phrog_3205 unknown function unknown function -1 23714 24421
NP_037683.1 NC_002166_p22 srb protein singleton unknown function unknown function -1 13751 13972
NP_037676.1 NC_002166_p15 tail length tape measure protein phrog_2854 tail length tape measure protein tail 1 8478 10898
NP_037674.1 NC_002166_p13 lambdaanalog phrog_1749 tail assembly chaperone tail 1 7797 8282
NP_037693.1 NC_002166_p32 gene P protein phrog_19 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism 1 30918 32354
NP_037681.1 NC_002166_p20 hypothetical protein phrog_32 tail assembly protein tail 1 13022 13630
NP_037691.1 NC_002166_p30 IS903 transposase phrog_2262 transposase integration and excision -1 26657 27580
NP_037689.1 NC_002166_p28 Abc2 protein phrog_656 abc2 anti-RecBCD moron, auxiliary metabolic gene and host takeover -1 24593 24886
NP_037666.1 NC_002166_p5 major capsid subunit precursor phrog_10 major head protein head and packaging 1 4028 5185
NP_037662.1 NC_002166_p1 terminase small subunit phrog_5601 terminase small subunit head and packaging 1 50 535
NP_037669.1 NC_002166_p8 hypothetical protein phrog_2612 unknown function unknown function 1 5778 5975
NP_037677.1 NC_002166_p16 hypothetical protein phrog_14 minor tail protein tail 1 10898 11236
NP_037692.1 NC_002166_p31 gene O protein phrog_345 replication initiation O-like DNA, RNA and nucleotide metabolism 1 30029 30928
NP_037684.1 NC_002166_p23 hypothetical protein phrog_31 central tail fiber J tail 1 14137 17688
NP_037680.1 NC_002166_p19 hypothetical protein phrog_5031 unknown function unknown function 1 12748 12972
NP_037682.1 NC_002166_p21 hypothetical protein singleton unknown function unknown function 1 13652 13831
NP_037670.1 NC_002166_p9 hypothetical protein phrog_25 head closure Hc1 connector 1 5977 6309
NP_037686.1 NC_002166_p25 integrase phrog_1 integrase integration and excision -1 20724 21797