| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_002214 |
Definition |
Streptococcus thermophilus bacteriophage Sfi11, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Brussowvirus. |
DB of origin |
REFSEQ |
Length |
39807 |
Host Name |
Streptococcus thermophilus |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
51 |
%GC |
38.55 |
Number of singletons |
0 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| NP_056708.1 | NC_002214_p37 | hypothetical protein | phrog_124 | Sak4-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 30494 | 31195 |
| NP_056683.1 | NC_002214_p12 | hypothetical protein | phrog_348 | minor head protein | head and packaging | 1 | 7851 | 8165 |
| NP_056705.1 | NC_002214_p34 | hypothetical protein | phrog_3 | transcriptional repressor | transcription regulation | 1 | 29400 | 29609 |
| NP_056682.1 | NC_002214_p11 | hypothetical protein | phrog_132 | head-tail adaptor | connector | 1 | 7513 | 7854 |
| NP_056694.1 | NC_002214_p23 | anti-receptor | phrog_10693 | host range and adsorption protein | moron, auxiliary metabolic gene and host takeover | 1 | 20569 | 22656 |
| NP_056684.1 | NC_002214_p13 | hypothetical protein | phrog_5 | tail completion or Neck1 protein | connector | 1 | 8165 | 8509 |
| NP_056720.1 | NC_002214_p49 | DNA binding protein | phrog_1994 | DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 37834 | 38337 |
| NP_056676.1 | NC_002214_p5 | hypothetical protein | phrog_64 | portal protein | head and packaging | 1 | 2759 | 4267 |
| NP_056696.1 | NC_002214_p25 | hypothetical protein | phrog_1060 | unknown function | unknown function | 1 | 24630 | 25079 |
| NP_056698.1 | NC_002214_p27 | holin | phrog_297 | holin | lysis | 1 | 25644 | 25907 |
| NP_056712.1 | NC_002214_p41 | primase | phrog_864 | DNA primase | DNA, RNA and nucleotide metabolism | 1 | 33768 | 35282 |
| NP_056710.1 | NC_002214_p39 | hypothetical protein | phrog_378 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 32508 | 32963 |
| NP_056691.1 | NC_002214_p20 | minor structural protein | phrog_588 | tail fiber protein and host specificity | tail | 1 | 16279 | 19281 |
| NP_056681.1 | NC_002214_p10 | hypothetical protein | phrog_5279 | unknown function | unknown function | 1 | 7340 | 7501 |
| NP_056722.1 | NC_002214_p51 | hypothetical protein | phrog_1814 | unknown function | unknown function | 1 | 39045 | 39755 |
| NP_056716.1 | NC_002214_p45 | hypothetical protein | phrog_803 | host nuclease inhibitor | moron, auxiliary metabolic gene and host takeover | 1 | 36480 | 36653 |
| NP_056695.1 | NC_002214_p24 | minor structural protein | phrog_372 | tail protein | tail | 1 | 22657 | 24666 |
| NP_056673.1 | NC_002214_p2 | hypothetical protein | phrog_248 | transcriptional activator | transcription regulation | 1 | 485 | 898 |
| NP_056706.1 | NC_002214_p35 | hypothetical protein | phrog_1022 | unknown function | unknown function | 1 | 29626 | 29748 |
| NP_056717.1 | NC_002214_p46 | hypothetical protein | phrog_1489 | unknown function | unknown function | 1 | 36650 | 36805 |
| NP_056693.1 | NC_002214_p22 | hypothetical protein | phrog_7926 | helicase subunit of the DNA excision repair complex | DNA, RNA and nucleotide metabolism | 1 | 20418 | 20591 |
| NP_056690.1 | NC_002214_p19 | minor structural protein | phrog_202 | distal tail protein Dit | tail | 1 | 14741 | 16279 |
| NP_056713.1 | NC_002214_p42 | hypothetical protein | phrog_9118 | unknown function | unknown function | 1 | 35536 | 35967 |
| NP_056711.1 | NC_002214_p40 | hypothetical protein | phrog_695 | DNA polymerase/primase | DNA, RNA and nucleotide metabolism | 1 | 32966 | 33781 |
| NP_056697.1 | NC_002214_p26 | holin | phrog_199 | holin | lysis | 1 | 25247 | 25672 |
| NP_056692.1 | NC_002214_p21 | hypothetical protein | phrog_3267 | tail protein | tail | 1 | 19297 | 20418 |
| NP_056678.1 | NC_002214_p7 | hypothetical protein | phrog_172 | head scaffolding protein | head and packaging | 1 | 5303 | 5884 |
| NP_056677.1 | NC_002214_p6 | hypothetical protein | phrog_115 | minor head protein | head and packaging | 1 | 4264 | 5118 |
| NP_056686.1 | NC_002214_p15 | hypothetical protein | phrog_238 | major tail protein | tail | 1 | 8905 | 9411 |
| NP_056689.1 | NC_002214_p18 | minor tail protein | phrog_1204 | tail protein | tail | 1 | 10209 | 14741 |
| NP_056699.1 | NC_002214_p28 | lysin | phrog_998 | endolysin | lysis | 1 | 25888 | 26754 |
| NP_056715.1 | NC_002214_p44 | hypothetical protein | phrog_1982 | unknown function | unknown function | 1 | 36253 | 36522 |
| NP_056709.1 | NC_002214_p38 | helicase | phrog_16 | DNA helicase | DNA, RNA and nucleotide metabolism | 1 | 31170 | 32501 |
| NP_056719.1 | NC_002214_p48 | hypothetical protein | phrog_121 | unknown function | unknown function | 1 | 37297 | 37833 |
| NP_056700.1 | NC_002214_p29 | hypothetical protein | phrog_8487 | unknown function | unknown function | 1 | 27333 | 27668 |
| NP_056687.1 | NC_002214_p16 | hypothetical protein | phrog_183 | tail chaperone protein | tail | 1 | 9486 | 9839 |
| NP_056721.1 | NC_002214_p50 | hypothetical protein | phrog_884 | unknown function | unknown function | 1 | 38312 | 38593 |
| NP_056703.1 | NC_002214_p32 | hypothetical protein | phrog_11483 | unknown function | unknown function | 1 | 28544 | 28759 |
| NP_056714.1 | NC_002214_p43 | hypothetical protein | phrog_93 | endonuclease | DNA, RNA and nucleotide metabolism | 1 | 35949 | 36269 |
| NP_056702.1 | NC_002214_p31 | hypothetical protein | phrog_16094 | unknown function | unknown function | 1 | 28267 | 28518 |
| NP_056704.1 | NC_002214_p33 | hypothetical protein | phrog_32666 | unknown function | unknown function | 1 | 28781 | 29218 |
| NP_056718.1 | NC_002214_p47 | hypothetical protein | phrog_33645 | unknown function | unknown function | 1 | 36806 | 37006 |
| NP_056672.1 | NC_002214_p1 | hypothetical protein | phrog_26202 | unknown function | unknown function | 1 | 390 | 596 |
| NP_056679.1 | NC_002214_p8 | hypothetical protein | phrog_909 | major head protein | head and packaging | 1 | 5904 | 6263 |
| NP_056701.1 | NC_002214_p30 | hypothetical protein | phrog_4964 | unknown function | unknown function | 1 | 27690 | 28241 |
| NP_056685.1 | NC_002214_p14 | hypothetical protein | phrog_176 | tail terminator | connector | 1 | 8506 | 8892 |
| NP_056707.1 | NC_002214_p36 | hypothetical protein | phrog_253 | Mu Gam-like end protection | DNA, RNA and nucleotide metabolism | 1 | 30024 | 30497 |
| NP_056680.1 | NC_002214_p9 | hypothetical protein | phrog_29 | major head protein | head and packaging | 1 | 6282 | 7328 |
| NP_056675.1 | NC_002214_p4 | hypothetical protein | phrog_2 | terminase large subunit | head and packaging | 1 | 1518 | 2753 |
| NP_056674.1 | NC_002214_p3 | hypothetical protein | phrog_51 | terminase small subunit | head and packaging | 1 | 1013 | 1531 |
| NP_056688.1 | NC_002214_p17 | hypothetical protein | phrog_441 | tail assembly chaperone | tail | 1 | 9902 | 10219 |