Genomic map of Roseobacter phage SIO1 (NC_002519)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_002519
Definition
Roseophage SIO1 complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae.
DB of origin
REFSEQ
Length
39898
Host Name
Roseobacter
Host domain
Bacteria
Is prophage?
undef
Number of proteins
32
%GC
46.16
Number of singletons
11
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
NP_064746.1 NC_002519_p9 hypothetical protein singleton unknown function unknown function 1 7891 8202
NP_064756.1 NC_002519_p19 RP Endonuclease I phrog_945 endonuclease DNA, RNA and nucleotide metabolism 1 19118 19522
NP_064743.1 NC_002519_p6 gp5.1 singleton unknown function unknown function -1 4688 5254
NP_064755.1 NC_002519_p18 hypothetical protein phrog_1990 Cas4-domain exonuclease DNA, RNA and nucleotide metabolism 1 18265 19128
NP_064745.1 NC_002519_p8 hypothetical protein singleton unknown function unknown function -1 6348 7970
NP_064744.1 NC_002519_p7 hypothetical protein singleton unknown function unknown function -1 5663 6412
NP_064757.1 NC_002519_p20 hypothetical protein phrog_229 MazG-like pyrophosphatase other 1 19765 19998
NP_064760.1 NC_002519_p23 hypothetical protein singleton unknown function unknown function -1 25069 25671
NP_064754.1 NC_002519_p17 hypothetical protein phrog_37869 unknown function unknown function 1 17261 17839
NP_064742.1 NC_002519_p5 hypothetical protein phrog_38 terminase large subunit head and packaging -1 3161 4222
NP_064752.1 NC_002519_p15 RPprimase/helicase phrog_239 DNA primase/helicase DNA, RNA and nucleotide metabolism 1 13372 14940
NP_064759.1 NC_002519_p22 hypothetical protein phrog_30566 unknown function unknown function -1 24559 24897
NP_064766.1 NC_002519_p29 hypothetical protein phrog_8094 tail appendage tail -1 33703 35850
NP_064739.1 NC_002519_p2 hypothetical protein phrog_20726 unknown function unknown function 1 778 1521
NP_064758.1 NC_002519_p21 RP ribonucleotide reductase phrog_367 ribonucleotide reductase DNA, RNA and nucleotide metabolism 1 20174 22189
NP_064761.1 NC_002519_p24 hypothetical protein singleton unknown function unknown function -1 25671 26414
NP_064767.1 NC_002519_p30 hypothetical protein phrog_7592 tail protein tail -1 36123 36743
NP_064764.1 NC_002519_p27 gp26.1 phrog_8168 unknown function unknown function -1 32831 33265
NP_064763.1 NC_002519_p26 hypothetical protein phrog_38076 unknown function unknown function -1 28362 32816
NP_064769.1 NC_002519_p32 hypothetical protein phrog_7931 unknown function unknown function -1 38518 39285
NP_064753.1 NC_002519_p16 RP DNA pol phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism 1 15502 17244
NP_064740.1 NC_002519_p3 hypothetical protein singleton unknown function unknown function 1 1581 2429
NP_064747.1 NC_002519_p10 hypothetical protein phrog_3842 unknown function unknown function 1 9486 10076
NP_064749.1 NC_002519_p12 RP thymidylate synthase phrog_85 thymidylate synthase DNA, RNA and nucleotide metabolism 1 10980 11648
NP_064768.1 NC_002519_p31 hypothetical protein phrog_38624 unknown function unknown function -1 36874 37446
NP_064751.1 NC_002519_p14 hypothetical protein singleton unknown function unknown function 1 12234 12602
NP_064750.1 NC_002519_p13 hypothetical protein singleton unknown function unknown function 1 11615 11959
NP_064748.1 NC_002519_p11 hypothetical protein phrog_4973 unknown function unknown function 1 10100 10528
NP_064741.1 NC_002519_p4 hypothetical protein singleton unknown function unknown function 1 2531 3346
NP_064738.1 NC_002519_p1 hypothetical protein singleton unknown function unknown function 1 441 851
NP_064762.1 NC_002519_p25 hypothetical protein phrog_37630 unknown function unknown function -1 26602 28296
NP_064765.1 NC_002519_p28 gp26.2 phrog_1249 acetyltransferase other -1 33267 33728