Genomic map of Bacillus virus GA1 (GA-1) (NC_002649)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_002649
Definition
Bacillus phage GA-1, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; Picovirinae; Salasvirus.
DB of origin
REFSEQ
Length
21129
Host Name
Bacillus sp.
Host domain
Bacteria
Is prophage?
undef
Number of proteins
35
%GC
34.65
Number of singletons
18
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
NP_073678.1 NC_002649_p2 hypothetical protein singleton unknown function unknown function -1 558 647
NP_073700.1 NC_002649_p24 hypothetical protein singleton unknown function unknown function -1 17624 17815
NP_073698.1 NC_002649_p22 peptidoglycan hydrolase phrog_2742 endolysin lysis 1 15858 16577
NP_073699.1 NC_002649_p23 DNA encapsidation protein phrog_2150 terminase head and packaging 1 16590 17600
NP_073705.1 NC_002649_p29 hypothetical protein singleton unknown function unknown function -1 18890 19240
NP_073691.1 NC_002649_p15 major head protein phrog_2006 major head protein head and packaging 1 7137 8555
NP_073690.1 NC_002649_p14 scaffolding protein phrog_10439 head scaffolding protein head and packaging 1 6789 7112
NP_073693.1 NC_002649_p17 upper collar protein phrog_2038 upper collar connector connector 1 10414 11334
NP_073710.1 NC_002649_p34 hypothetical protein singleton unknown function unknown function -1 20370 20687
NP_073697.1 NC_002649_p21 holin phrog_199 holin lysis 1 15464 15865
NP_073687.1 NC_002649_p11 transcriptional regulator phrog_10365 late transcriptional activator transcription regulation -1 5197 5601
NP_073681.1 NC_002649_p5 hypothetical protein singleton unknown function unknown function -1 1372 1542
NP_073684.1 NC_002649_p8 hypothetical protein singleton unknown function unknown function -1 2282 2674
NP_073701.1 NC_002649_p25 hypothetical protein singleton unknown function unknown function -1 17802 17948
NP_073704.1 NC_002649_p28 hypothetical protein singleton unknown function unknown function -1 18588 18836
NP_073677.1 NC_002649_p1 hypothetical protein singleton unknown function unknown function -1 193 519
NP_073711.1 NC_002649_p35 phi29 gene 17 homologue singleton unknown function unknown function -1 20680 20943
NP_073707.1 NC_002649_p31 hypothetical protein singleton unknown function unknown function -1 19409 19723
NP_073709.1 NC_002649_p33 hypothetical protein singleton unknown function unknown function -1 20028 20312
NP_073694.1 NC_002649_p18 lower collar protein phrog_3225 adaptor Ad4 connector 1 11279 12142
NP_073702.1 NC_002649_p26 hypothetical protein singleton unknown function unknown function -1 17945 18187
NP_073680.1 NC_002649_p4 hypothetical protein phrog_23240 unknown function unknown function -1 947 1372
NP_073686.1 NC_002649_p10 terminal protein phrog_6358 DNA terminal protein DNA, RNA and nucleotide metabolism -1 4529 5326
NP_073695.1 NC_002649_p19 neck appendage protein precursor phrog_7121 tail fiber protein tail 1 12157 14379
NP_073688.1 NC_002649_p12 SSB phrog_6243 single strand DNA binding protein DNA, RNA and nucleotide metabolism -1 5613 6125
NP_073679.1 NC_002649_p3 hypothetical protein singleton unknown function unknown function -1 640 963
NP_073696.1 NC_002649_p20 morphogenesis protein phrog_11037 unknown function unknown function 1 14381 15448
NP_073685.1 NC_002649_p9 DNA polymerase phrog_1907 DNA polymerase DNA, RNA and nucleotide metabolism -1 2765 4501
NP_073683.1 NC_002649_p7 hypothetical protein singleton unknown function unknown function -1 2180 2281
NP_073703.1 NC_002649_p27 16.7 protein homologue (phi29) phrog_6682 GP16.7-like replication protein DNA, RNA and nucleotide metabolism -1 18190 18591
NP_073708.1 NC_002649_p32 hypothetical protein singleton unknown function unknown function -1 19717 20022
NP_073692.1 NC_002649_p16 tail protein phrog_2248 tail protein tail 1 8574 10412
NP_073689.1 NC_002649_p13 dsDNA binding protein phrog_6370 dsDNA binding protein DNA, RNA and nucleotide metabolism -1 6230 6511
NP_073682.1 NC_002649_p6 hypothetical protein singleton unknown function unknown function -1 1896 2180
NP_073706.1 NC_002649_p30 hypothetical protein singleton unknown function unknown function -1 19318 19395