Genomic map of Lactococcus phage bIL285 (NC_002666)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_002666
Definition
Lactococcus prophage bIL285, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.
DB of origin
REFSEQ
Length
35538
Host Name
Lactococcus lactis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
62
%GC
35.18
Number of singletons
2
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
NP_076606.1 NC_002666_p34 hypothetical protein phrog_11381 unknown function unknown function 1 13761 14060
NP_076598.1 NC_002666_p26 hypothetical protein phrog_8486 unknown function unknown function 1 11051 11323
NP_076599.1 NC_002666_p27 hypothetical protein phrog_121 unknown function unknown function 1 11320 11874
NP_076633.1 NC_002666_p61 holin phrog_263 holin lysis 1 33944 34231
NP_076596.1 NC_002666_p24 hypothetical protein phrog_7446 unknown function unknown function 1 10669 10839
NP_076614.1 NC_002666_p42 portal protein phrog_12 portal protein head and packaging 1 18138 19379
NP_076621.1 NC_002666_p49 hypothetical protein phrog_78 tail terminator connector 1 23003 23320
NP_076601.1 NC_002666_p29 hypothetical protein phrog_6209 unknown function unknown function 1 12293 12790
NP_076616.1 NC_002666_p44 capsid protein phrog_10 major head protein head and packaging 1 19962 21155
NP_076575.1 NC_002666_p3 hypothetical protein phrog_87 metallo-protease other -1 1943 2380
NP_076615.1 NC_002666_p43 protease phrog_80 head maturation protease head and packaging 1 19394 19990
NP_076573.1 NC_002666_p1 integrase phrog_1 integrase integration and excision -1 94 1218
NP_076583.1 NC_002666_p11 hypothetical protein phrog_5450 unknown function unknown function 1 5140 5355
NP_076618.1 NC_002666_p46 hypothetical protein phrog_2550 unknown function unknown function 1 22060 22341
NP_076581.1 NC_002666_p9 hypothetical protein phrog_7263 unknown function unknown function 1 4571 4765
NP_076608.1 NC_002666_p36 hypothetical protein phrog_28632 unknown function unknown function 1 14236 14373
NP_076629.1 NC_002666_p57 hypothetical protein singleton unknown function unknown function 1 32720 33127
NP_076585.1 NC_002666_p13 hypothetical protein phrog_2205 Mu Gam-like end protection DNA, RNA and nucleotide metabolism 1 5471 5989
NP_076591.1 NC_002666_p19 hypothetical protein phrog_22158 unknown function unknown function 1 9094 9288
NP_076580.1 NC_002666_p8 hypothetical protein phrog_5998 unknown function unknown function 1 4430 4558
NP_076634.1 NC_002666_p62 lysin phrog_998 endolysin lysis 1 34231 35010
NP_076587.1 NC_002666_p15 SSB protein phrog_44 single strand DNA binding protein DNA, RNA and nucleotide metabolism 1 6621 7073
NP_076592.1 NC_002666_p20 hypothetical protein phrog_3109 unknown function unknown function 1 9245 9520
NP_076625.1 NC_002666_p53 hypothetical protein phrog_33 distal tail protein Dit tail 1 26794 27543
NP_076588.1 NC_002666_p16 DNA replication protein phrog_5708 DnaD-like helicase loader DNA, RNA and nucleotide metabolism 1 7198 7980
NP_076584.1 NC_002666_p12 hypothetical protein phrog_15532 unknown function unknown function 1 5243 5455
NP_076619.1 NC_002666_p47 hypothetical protein phrog_1951 head-tail adaptor connector 1 22352 22645
NP_076630.1 NC_002666_p58 hypothetical protein phrog_35009 holin lysis 1 33114 33452
NP_076576.1 NC_002666_p4 repressor phrog_8 transcriptional regulator transcription regulation -1 2377 2919
NP_076605.1 NC_002666_p33 hypothetical protein phrog_2670 unknown function unknown function 1 13587 13760
NP_076595.1 NC_002666_p23 hypothetical protein phrog_4149 unknown function unknown function 1 10089 10658
NP_076604.1 NC_002666_p32 hypothetical protein phrog_8350 unknown function unknown function 1 13360 13545
NP_076627.1 NC_002666_p55 hypothetical protein phrog_6042 minor head protein head and packaging 1 30237 31838
NP_076607.1 NC_002666_p35 hypothetical protein phrog_25286 unknown function unknown function 1 14057 14239
NP_076582.1 NC_002666_p10 hypothetical protein phrog_6258 unknown function unknown function -1 4762 5037
NP_076589.1 NC_002666_p17 hypothetical protein phrog_50 DnaC-like helicase loader DNA, RNA and nucleotide metabolism 1 7980 8705
NP_076624.1 NC_002666_p52 tail protein phrog_58 tail length tape measure protein tail 1 24532 26793
NP_076594.1 NC_002666_p22 hypothetical protein phrog_4314 unknown function unknown function 1 9920 10099
NP_076612.1 NC_002666_p40 hypothetical protein phrog_361 terminase small subunit head and packaging 1 16030 16398
NP_076609.1 NC_002666_p37 hypothetical protein phrog_10147 unknown function unknown function 1 14603 14896
NP_076632.1 NC_002666_p60 hypothetical protein phrog_689 holin lysis 1 33707 33931
NP_076617.1 NC_002666_p45 hypothetical protein phrog_4417 unknown function unknown function 1 21210 22067
NP_076620.1 NC_002666_p48 hypothetical protein phrog_5 tail completion or Neck1 protein connector 1 22635 23006
NP_076611.1 NC_002666_p39 hypothetical protein phrog_119 HNH endonuclease DNA, RNA and nucleotide metabolism 1 15486 15938
NP_076578.1 NC_002666_p6 anti-repressor phrog_373 anti-repressor transcription regulation 1 3342 4085
NP_076623.1 NC_002666_p51 hypothetical protein phrog_709 unknown function unknown function 1 23956 24315
NP_076626.1 NC_002666_p54 endopeptidase phrog_1067 minor head protein head and packaging 1 27540 30224
NP_076602.1 NC_002666_p30 hypothetical protein phrog_9662 unknown function unknown function 1 12780 13127
NP_076577.1 NC_002666_p5 repressor phrog_3 transcriptional repressor transcription regulation 1 3087 3305
NP_076593.1 NC_002666_p21 hypothetical protein phrog_18060 unknown function unknown function 1 9632 9898
NP_076622.1 NC_002666_p50 hypothetical protein phrog_88 major tail protein tail 1 23338 23946
NP_076610.1 NC_002666_p38 hypothetical protein phrog_2198 Alt-like transcription activator transcription regulation 1 14974 15375
NP_076586.1 NC_002666_p14 hypothetical protein phrog_659 Sak-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 5998 6621
NP_076613.1 NC_002666_p41 terminase phrog_9 terminase large subunit head and packaging 1 16382 18160
NP_076603.1 NC_002666_p31 hypothetical protein phrog_803 host nuclease inhibitor moron, auxiliary metabolic gene and host takeover 1 13149 13313
NP_076579.1 NC_002666_p7 hypothetical protein phrog_823 unknown function unknown function 1 4098 4433
NP_076628.1 NC_002666_p56 hypothetical protein singleton unknown function unknown function 1 31831 32661
NP_076600.1 NC_002666_p28 dUTPase phrog_135 dUTPase DNA, RNA and nucleotide metabolism 1 11871 12290
NP_076631.1 NC_002666_p59 hypothetical protein phrog_2566 unknown function unknown function 1 33454 33681
NP_076574.1 NC_002666_p2 hypothetical protein phrog_2700 unknown function unknown function -1 1341 1886
NP_076590.1 NC_002666_p18 RusA phrog_140 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 8702 9091
NP_076597.1 NC_002666_p25 hypothetical protein phrog_7240 unknown function unknown function 1 10852 11058