Genomic map of Lactococcus phage bIL286 (NC_002667)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_002667
Definition
Lactococcus prophage bIL286, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.
DB of origin
REFSEQ
Length
41834
Host Name
Lactococcus lactis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
61
%GC
35.32
Number of singletons
1
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
NP_076693.1 NC_002667_p59 hypothetical protein phrog_2370 neck passage structure connector 1 38403 39965
NP_076655.1 NC_002667_p21 hypothetical protein phrog_3109 unknown function unknown function 1 10328 10567
NP_076686.1 NC_002667_p52 tail protein phrog_167 tail length tape measure protein tail 1 26180 31102
NP_076682.1 NC_002667_p48 hypothetical protein phrog_5 tail completion or Neck1 protein connector 1 23869 24375
NP_076667.1 NC_002667_p33 hypothetical protein phrog_2670 unknown function unknown function 1 14816 15010
NP_076685.1 NC_002667_p51 hypothetical protein phrog_1346 tail protein tail 1 25536 25955
NP_076645.1 NC_002667_p11 hypothetical protein phrog_5450 unknown function unknown function 1 5548 5763
NP_076681.1 NC_002667_p47 hypothetical protein phrog_25 head closure Hc1 connector 1 23517 23867
NP_076652.1 NC_002667_p18 hypothetical protein phrog_2108 unknown function unknown function 1 9316 9489
NP_076659.1 NC_002667_p25 hypothetical protein phrog_5105 unknown function unknown function 1 11747 12256
NP_076651.1 NC_002667_p17 DnaC phrog_50 DnaC-like helicase loader DNA, RNA and nucleotide metabolism 1 8435 9319
NP_076660.1 NC_002667_p26 hypothetical protein phrog_3972 unknown function unknown function 1 12265 12624
NP_076637.1 NC_002667_p3 hypothetical protein phrog_87 metallo-protease other -1 2286 2873
NP_076648.1 NC_002667_p14 hypothetical protein phrog_1097 Erf-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 6282 7040
NP_076695.1 NC_002667_p61 lysin phrog_998 endolysin lysis 1 40290 41069
NP_076640.1 NC_002667_p6 anti-repressor phrog_373 anti-repressor transcription regulation 1 3823 4533
NP_076669.1 NC_002667_p35 hypothetical protein phrog_35454 unknown function unknown function 1 15471 15830
NP_076670.1 NC_002667_p36 hypothetical protein phrog_2198 Alt-like transcription activator transcription regulation 1 15908 16330
NP_076678.1 NC_002667_p44 protease phrog_94 head maturation protease head and packaging 1 21258 21965
NP_076635.1 NC_002667_p1 integrase phrog_1 integrase integration and excision -1 168 1247
NP_076654.1 NC_002667_p20 hypothetical protein phrog_6209 unknown function unknown function 1 9841 10335
NP_076647.1 NC_002667_p13 hypothetical protein phrog_4729 unknown function unknown function 1 5878 6273
NP_076676.1 NC_002667_p42 hypothetical protein phrog_1142 unknown function unknown function 1 19831 20040
NP_076691.1 NC_002667_p57 host-specificity phrog_28865 tail protein tail 1 35715 38147
NP_076671.1 NC_002667_p37 hypothetical protein singleton unknown function unknown function 1 16378 16560
NP_076666.1 NC_002667_p32 hypothetical protein phrog_6803 unknown function unknown function 1 14676 14813
NP_076663.1 NC_002667_p29 dUTPase phrog_135 dUTPase DNA, RNA and nucleotide metabolism 1 13533 13952
NP_076680.1 NC_002667_p46 hypothetical protein phrog_40 head-tail adaptor Ad1 connector 1 23219 23542
NP_076646.1 NC_002667_p12 hypothetical protein phrog_32073 unknown function unknown function 1 5765 5863
NP_076684.1 NC_002667_p50 hypothetical protein phrog_88 major tail protein tail 1 24798 25391
NP_076690.1 NC_002667_p56 hypothetical protein phrog_7926 helicase subunit of the DNA excision repair complex DNA, RNA and nucleotide metabolism 1 35564 35737
NP_076642.1 NC_002667_p8 hypothetical protein phrog_5998 unknown function unknown function 1 4838 4966
NP_076636.1 NC_002667_p2 hypothetical protein phrog_32775 unknown function unknown function -1 1370 2221
NP_076673.1 NC_002667_p39 hypothetical protein phrog_144 HNH endonuclease DNA, RNA and nucleotide metabolism 1 16785 17300
NP_076668.1 NC_002667_p34 hypothetical protein phrog_37531 unknown function unknown function 1 15191 15346
NP_076665.1 NC_002667_p31 hypothetical protein phrog_1083 unknown function unknown function 1 14322 14657
NP_076661.1 NC_002667_p27 hypothetical protein phrog_121 unknown function unknown function 1 12617 13252
NP_076650.1 NC_002667_p16 replication protein phrog_2562 replication initiation protein DNA, RNA and nucleotide metabolism 1 7586 8425
NP_076649.1 NC_002667_p15 SSB phrog_44 single strand DNA binding protein DNA, RNA and nucleotide metabolism 1 7033 7458
NP_076641.1 NC_002667_p7 hypothetical protein phrog_668 HTH DNA binding protein DNA, RNA and nucleotide metabolism 1 4546 4836
NP_076692.1 NC_002667_p58 hypothetical protein phrog_689 holin lysis 1 38167 38391
NP_076638.1 NC_002667_p4 repressor phrog_8 transcriptional regulator transcription regulation -1 2883 3404
NP_076688.1 NC_002667_p54 hypothetical protein phrog_6253 minor tail protein tail 1 32640 34427
NP_076677.1 NC_002667_p43 portal protein phrog_12 portal protein head and packaging 1 20037 21215
NP_076639.1 NC_002667_p5 repressor phrog_3 transcriptional repressor transcription regulation 1 3576 3809
NP_076683.1 NC_002667_p49 hypothetical protein phrog_1217 tail protein tail 1 24372 24767
NP_076674.1 NC_002667_p40 hypothetical protein phrog_83 terminase small subunit head and packaging 1 17429 17902
NP_076662.1 NC_002667_p28 hypothetical protein phrog_6648 unknown function unknown function 1 13249 13536
NP_076643.1 NC_002667_p9 hypothetical protein phrog_7263 unknown function unknown function 1 4979 5173
NP_076679.1 NC_002667_p45 capsid protein phrog_10 major head protein head and packaging 1 21977 23203
NP_076675.1 NC_002667_p41 terminase phrog_9 terminase large subunit head and packaging 1 17880 19862
NP_076687.1 NC_002667_p53 hypothetical protein phrog_202 distal tail protein Dit tail 1 31105 32640
NP_076653.1 NC_002667_p19 hypothetical protein phrog_190 Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 9470 9844
NP_076644.1 NC_002667_p10 hypothetical protein phrog_6258 unknown function unknown function -1 5170 5445
NP_076689.1 NC_002667_p55 hypothetical protein phrog_3267 tail protein tail 1 34443 35564
NP_076658.1 NC_002667_p24 hypothetical protein phrog_4149 unknown function unknown function 1 11160 11732
NP_076694.1 NC_002667_p60 holin phrog_263 holin lysis 1 39991 40290
NP_076656.1 NC_002667_p22 hypothetical protein phrog_18060 unknown function unknown function 1 10679 10969
NP_076672.1 NC_002667_p38 hypothetical protein phrog_23835 unknown function unknown function 1 16562 16783
NP_076664.1 NC_002667_p30 hypothetical protein phrog_4000 unknown function unknown function 1 13956 14300
NP_076657.1 NC_002667_p23 hypothetical protein phrog_4314 unknown function unknown function 1 10991 11170