| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_002669 |
Definition |
Lactococcus prophage bIL310, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae. |
DB of origin |
REFSEQ |
Length |
14957 |
Host Name |
Lactococcus lactis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
29 |
%GC |
35.87 |
Number of singletons |
8 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| NP_076779.1 | NC_002669_p29 | hypothetical protein | phrog_12061 | unknown function | unknown function | 1 | 14025 | 14348 |
| NP_076776.1 | NC_002669_p26 | hypothetical protein | phrog_22650 | unknown function | unknown function | 1 | 12436 | 13017 |
| NP_076765.1 | NC_002669_p15 | anti-repressor | phrog_2657 | transcriptional regulator | transcription regulation | 1 | 6662 | 7402 |
| NP_076762.1 | NC_002669_p12 | hypothetical protein | phrog_87 | metallo-protease | other | -1 | 5225 | 5779 |
| NP_076768.1 | NC_002669_p18 | hypothetical protein | phrog_3 | transcriptional repressor | transcription regulation | 1 | 8194 | 8445 |
| NP_076769.1 | NC_002669_p19 | hypothetical protein | phrog_10458 | unknown function | unknown function | 1 | 8442 | 8723 |
| NP_597940.1 | NC_002669_p6 | hypothetical protein | singleton | unknown function | unknown function | -1 | 3070 | 3225 |
| NP_076754.1 | NC_002669_p3 | hypothetical protein | singleton | unknown function | unknown function | -1 | 1998 | 2162 |
| NP_076772.1 | NC_002669_p22 | hypothetical protein | phrog_20382 | unknown function | unknown function | 1 | 9253 | 9447 |
| NP_076760.1 | NC_002669_p10 | hypothetical protein | singleton | unknown function | unknown function | -1 | 4884 | 5114 |
| NP_076764.1 | NC_002669_p14 | repressor | phrog_11187 | transcriptional regulator | transcription regulation | 1 | 6436 | 6633 |
| NP_076763.1 | NC_002669_p13 | immunity repressor | phrog_8 | transcriptional regulator | transcription regulation | -1 | 5789 | 6175 |
| NP_076778.1 | NC_002669_p28 | hypothetical protein | phrog_2198 | Alt-like transcription activator | transcription regulation | 1 | 13590 | 14000 |
| NP_076757.1 | NC_002669_p7 | hypothetical protein | singleton | unknown function | unknown function | -1 | 3863 | 4087 |
| NP_076758.1 | NC_002669_p8 | hypothetical protein | singleton | unknown function | unknown function | -1 | 4223 | 4465 |
| NP_076752.1 | NC_002669_p1 | integrase | phrog_1 | integrase | integration and excision | -1 | 137 | 1321 |
| NP_076756.1 | NC_002669_p5 | hypothetical protein | phrog_21140 | unknown function | unknown function | -1 | 2485 | 2742 |
| NP_076767.1 | NC_002669_p17 | hypothetical protein | phrog_22685 | unknown function | unknown function | 1 | 7676 | 8197 |
| NP_076755.1 | NC_002669_p4 | hypothetical protein | singleton | unknown function | unknown function | -1 | 2279 | 2494 |
| NP_076773.1 | NC_002669_p23 | hypothetical protein | phrog_2113 | unknown function | unknown function | 1 | 9434 | 9763 |
| NP_076759.1 | NC_002669_p9 | hypothetical protein | phrog_28419 | unknown function | unknown function | -1 | 4617 | 4811 |
| NP_076771.1 | NC_002669_p21 | hypothetical protein | phrog_15399 | unknown function | unknown function | 1 | 9002 | 9256 |
| NP_076766.1 | NC_002669_p16 | hypothetical protein | phrog_17906 | unknown function | unknown function | 1 | 7478 | 7672 |
| NP_076775.1 | NC_002669_p25 | helicase | phrog_864 | DNA primase | DNA, RNA and nucleotide metabolism | 1 | 10572 | 12200 |
| NP_076761.1 | NC_002669_p11 | hypothetical protein | singleton | unknown function | unknown function | -1 | 5134 | 5220 |
| NP_076777.1 | NC_002669_p27 | terminase | phrog_51 | terminase small subunit | head and packaging | 1 | 13150 | 13593 |
| NP_076753.1 | NC_002669_p2 | hypothetical protein | singleton | unknown function | unknown function | -1 | 1571 | 1876 |
| NP_076770.1 | NC_002669_p20 | hypothetical protein | phrog_16478 | unknown function | unknown function | 1 | 8766 | 9005 |
| NP_076774.1 | NC_002669_p24 | hypothetical protein | phrog_695 | DNA polymerase/primase | DNA, RNA and nucleotide metabolism | 1 | 9767 | 10561 |