Genomic map of Lactococcus phage BK5-T (NC_002796)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_002796
Definition
Lactococcus phage BK5-T, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.
DB of origin
REFSEQ
Length
40003
Host Name
Lactococcus lactis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
63
%GC
34.97
Number of singletons
10
Number of paralogs
4

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
NP_116505.1 NC_002796_p13 hypothetical protein phrog_1346 tail protein tail 1 8173 8592
NP_116548.1 NC_002796_p56 hypothetical protein phrog_1083 unknown function unknown function 1 37207 37530
NP_116515.1 NC_002796_p23 hypothetical protein phrog_17177 unknown function unknown function 1 20838 21047
NP_116543.1 NC_002796_p51 hypothetical protein phrog_140 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 35314 35715
NP_116537.1 NC_002796_p45 hypothetical protein phrog_253 Mu Gam-like end protection DNA, RNA and nucleotide metabolism 1 32457 32966
NP_116493.1 NC_002796_p1 small terminase subunit phrog_83 terminase small subunit head and packaging 1 77 550
NP_116539.1 NC_002796_p47 hypothetical protein singleton unknown function unknown function -1 33022 33231
NP_116522.1 NC_002796_p30 hypothetical protein phrog_2695 unknown function unknown function 1 23679 25289
NP_116517.1 NC_002796_p25 holin phrog_689 holin lysis 1 22156 22383
NP_116551.1 NC_002796_p58 hypothetical protein phrog_2670 unknown function unknown function 1 37831 38004
NP_116542.1 NC_002796_p50 hypothetical protein phrog_7699 unknown function unknown function 1 35115 35336
NP_116544.1 NC_002796_p52 hypothetical protein phrog_3109 unknown function unknown function 1 35719 35958
NP_116498.1 NC_002796_p6 ATP-dependent ClpP protein phrog_94 head maturation protease head and packaging 1 3906 4619
NP_116509.1 NC_002796_p17 hypothetical protein singleton unknown function unknown function 1 15646 15840
NP_116546.1 NC_002796_p54 hypothetical protein phrog_3808 unknown function unknown function 1 36413 36712
NP_116507.1 NC_002796_p15 hypothetical protein phrog_167 tail length tape measure protein tail 1 9394 14535
NP_116531.1 NC_002796_p39 hypothetical protein phrog_823 unknown function unknown function 1 30639 30974
NP_116496.1 NC_002796_p4 hypothetical protein phrog_1142 unknown function unknown function 1 2479 2688
NP_116534.1 NC_002796_p42 hypothetical protein singleton unknown function unknown function 1 31333 31551
NP_116508.1 NC_002796_p16 hypothetical protein phrog_202 distal tail protein Dit tail 1 14532 16178
NP_116529.1 NC_002796_p37 Cro repressor phrog_3 transcriptional repressor transcription regulation 1 29574 29813
NP_116500.1 NC_002796_p8 hypothetical protein phrog_40 head-tail adaptor Ad1 connector 1 5853 6176
NP_116518.1 NC_002796_p26 holin phrog_263 holin lysis 1 22396 22683
NP_116499.1 NC_002796_p7 major structural protein phrog_10 major head protein head and packaging 1 4631 5845
NP_116524.1 NC_002796_p32 integrase phrog_1 integrase integration and excision -1 25911 27035
NP_116521.1 NC_002796_p29 hypothetical protein singleton unknown function unknown function -1 23252 23512
NP_116536.1 NC_002796_p44 hypothetical protein phrog_5257 unknown function unknown function 1 32146 32388
NP_116527.1 NC_002796_p35 cI repressor phrog_4 transcriptional repressor transcription regulation -1 28005 28898
NP_116532.1 NC_002796_p40 hypothetical protein phrog_5998 unknown function unknown function 1 30971 31099
NP_116495.1 NC_002796_p3 hypothetical protein singleton unknown function unknown function -1 1065 1385
NP_116519.1 NC_002796_p27 lysin phrog_998 endolysin lysis 1 22683 23462
NP_116552.1 NC_002796_p59 hypothetical protein singleton unknown function unknown function 1 38001 38180
NP_116497.1 NC_002796_p5 portal protein phrog_12 portal protein head and packaging 1 2685 3863
NP_116535.1 NC_002796_p43 hypothetical protein singleton unknown function unknown function -1 31773 32039
NP_116525.1 NC_002796_p33 hypothetical protein phrog_23345 unknown function unknown function -1 27173 27949
NP_116523.1 NC_002796_p31 hypothetical protein singleton unknown function unknown function -1 24905 25210
NP_116530.1 NC_002796_p38 hypothetical protein phrog_130 anti-repressor Ant transcription regulation 1 29826 30626
NP_116513.1 NC_002796_p21 hypothetical protein phrog_17177 unknown function unknown function 1 19902 20117
NP_116511.1 NC_002796_p19 hypothetical protein phrog_17177 unknown function unknown function 1 18981 19181
NP_116553.1 NC_002796_p60 hypothetical protein phrog_15805 unknown function unknown function 1 38444 38587
NP_116510.1 NC_002796_p18 hypothetical protein phrog_6468 tail fiber protein; host specificity tail 1 16178 21892
NP_116528.1 NC_002796_p36 transcription regulator phrog_4416 transcriptional regulator transcription regulation 1 29155 29346
NP_116503.1 NC_002796_p11 hypothetical protein phrog_1217 tail protein tail 1 7009 7404
NP_116545.1 NC_002796_p53 dUTPase phrog_135 dUTPase DNA, RNA and nucleotide metabolism 1 36069 36416
NP_116533.1 NC_002796_p41 hypothetical protein phrog_7263 unknown function unknown function 1 31112 31453
NP_116516.1 NC_002796_p24 hypothetical protein phrog_8250 unknown function unknown function 1 21907 22143
NP_116538.1 NC_002796_p46 hypothetical protein phrog_124 Sak4-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 32966 33670
NP_116556.1 NC_002796_p63 hypothetical protein phrog_144 HNH endonuclease DNA, RNA and nucleotide metabolism 1 39434 39952
NP_116506.1 NC_002796_p14 hypothetical protein phrog_22898 unknown function unknown function 1 8821 9312
NP_116504.1 NC_002796_p12 major structural protein phrog_88 major tail protein tail 1 7435 8028
NP_116501.1 NC_002796_p9 hypothetical protein phrog_25 head closure Hc1 connector 1 6151 6504
NP_116520.1 NC_002796_p28 hypothetical protein phrog_30499 unknown function unknown function -1 22772 22996
NP_116494.1 NC_002796_p2 large terminase subunit phrog_9 terminase large subunit head and packaging 1 537 2510
NP_116502.1 NC_002796_p10 hypothetical protein phrog_5 tail completion or Neck1 protein connector 1 6506 7012
NP_116555.1 NC_002796_p62 hypothetical protein singleton unknown function unknown function 1 39288 39416
NP_116512.1 NC_002796_p20 hypothetical protein phrog_17177 unknown function unknown function 1 19434 19649
NP_116550.1 NC_002796_p57 hypothetical protein phrog_8350 unknown function unknown function 1 37604 37834
NP_116554.1 NC_002796_p61 hypothetical protein phrog_2198 Alt-like transcription activator transcription regulation 1 38664 39065
NP_116540.1 NC_002796_p48 single stranded DNA binding protein phrog_378 single strand DNA binding protein DNA, RNA and nucleotide metabolism 1 33670 34191
NP_116547.1 NC_002796_p55 hypothetical protein phrog_12206 unknown function unknown function -1 36746 37084
NP_116514.1 NC_002796_p22 hypothetical protein phrog_17177 unknown function unknown function 1 20370 20585
NP_116541.1 NC_002796_p49 replication protein phrog_270 replication initiation protein DNA, RNA and nucleotide metabolism 1 34325 35134
NP_116526.1 NC_002796_p34 hypothetical protein singleton unknown function unknown function 1 27496 27690