| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_002796 |
Definition |
Lactococcus phage BK5-T, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae. |
DB of origin |
REFSEQ |
Length |
40003 |
Host Name |
Lactococcus lactis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
63 |
%GC |
34.97 |
Number of singletons |
10 |
Number of paralogs |
4 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| NP_116505.1 | NC_002796_p13 | hypothetical protein | phrog_1346 | tail protein | tail | 1 | 8173 | 8592 |
| NP_116548.1 | NC_002796_p56 | hypothetical protein | phrog_1083 | unknown function | unknown function | 1 | 37207 | 37530 |
| NP_116515.1 | NC_002796_p23 | hypothetical protein | phrog_17177 | unknown function | unknown function | 1 | 20838 | 21047 |
| NP_116543.1 | NC_002796_p51 | hypothetical protein | phrog_140 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 35314 | 35715 |
| NP_116537.1 | NC_002796_p45 | hypothetical protein | phrog_253 | Mu Gam-like end protection | DNA, RNA and nucleotide metabolism | 1 | 32457 | 32966 |
| NP_116493.1 | NC_002796_p1 | small terminase subunit | phrog_83 | terminase small subunit | head and packaging | 1 | 77 | 550 |
| NP_116539.1 | NC_002796_p47 | hypothetical protein | singleton | unknown function | unknown function | -1 | 33022 | 33231 |
| NP_116522.1 | NC_002796_p30 | hypothetical protein | phrog_2695 | unknown function | unknown function | 1 | 23679 | 25289 |
| NP_116517.1 | NC_002796_p25 | holin | phrog_689 | holin | lysis | 1 | 22156 | 22383 |
| NP_116551.1 | NC_002796_p58 | hypothetical protein | phrog_2670 | unknown function | unknown function | 1 | 37831 | 38004 |
| NP_116542.1 | NC_002796_p50 | hypothetical protein | phrog_7699 | unknown function | unknown function | 1 | 35115 | 35336 |
| NP_116544.1 | NC_002796_p52 | hypothetical protein | phrog_3109 | unknown function | unknown function | 1 | 35719 | 35958 |
| NP_116498.1 | NC_002796_p6 | ATP-dependent ClpP protein | phrog_94 | head maturation protease | head and packaging | 1 | 3906 | 4619 |
| NP_116509.1 | NC_002796_p17 | hypothetical protein | singleton | unknown function | unknown function | 1 | 15646 | 15840 |
| NP_116546.1 | NC_002796_p54 | hypothetical protein | phrog_3808 | unknown function | unknown function | 1 | 36413 | 36712 |
| NP_116507.1 | NC_002796_p15 | hypothetical protein | phrog_167 | tail length tape measure protein | tail | 1 | 9394 | 14535 |
| NP_116531.1 | NC_002796_p39 | hypothetical protein | phrog_823 | unknown function | unknown function | 1 | 30639 | 30974 |
| NP_116496.1 | NC_002796_p4 | hypothetical protein | phrog_1142 | unknown function | unknown function | 1 | 2479 | 2688 |
| NP_116534.1 | NC_002796_p42 | hypothetical protein | singleton | unknown function | unknown function | 1 | 31333 | 31551 |
| NP_116508.1 | NC_002796_p16 | hypothetical protein | phrog_202 | distal tail protein Dit | tail | 1 | 14532 | 16178 |
| NP_116529.1 | NC_002796_p37 | Cro repressor | phrog_3 | transcriptional repressor | transcription regulation | 1 | 29574 | 29813 |
| NP_116500.1 | NC_002796_p8 | hypothetical protein | phrog_40 | head-tail adaptor Ad1 | connector | 1 | 5853 | 6176 |
| NP_116518.1 | NC_002796_p26 | holin | phrog_263 | holin | lysis | 1 | 22396 | 22683 |
| NP_116499.1 | NC_002796_p7 | major structural protein | phrog_10 | major head protein | head and packaging | 1 | 4631 | 5845 |
| NP_116524.1 | NC_002796_p32 | integrase | phrog_1 | integrase | integration and excision | -1 | 25911 | 27035 |
| NP_116521.1 | NC_002796_p29 | hypothetical protein | singleton | unknown function | unknown function | -1 | 23252 | 23512 |
| NP_116536.1 | NC_002796_p44 | hypothetical protein | phrog_5257 | unknown function | unknown function | 1 | 32146 | 32388 |
| NP_116527.1 | NC_002796_p35 | cI repressor | phrog_4 | transcriptional repressor | transcription regulation | -1 | 28005 | 28898 |
| NP_116532.1 | NC_002796_p40 | hypothetical protein | phrog_5998 | unknown function | unknown function | 1 | 30971 | 31099 |
| NP_116495.1 | NC_002796_p3 | hypothetical protein | singleton | unknown function | unknown function | -1 | 1065 | 1385 |
| NP_116519.1 | NC_002796_p27 | lysin | phrog_998 | endolysin | lysis | 1 | 22683 | 23462 |
| NP_116552.1 | NC_002796_p59 | hypothetical protein | singleton | unknown function | unknown function | 1 | 38001 | 38180 |
| NP_116497.1 | NC_002796_p5 | portal protein | phrog_12 | portal protein | head and packaging | 1 | 2685 | 3863 |
| NP_116535.1 | NC_002796_p43 | hypothetical protein | singleton | unknown function | unknown function | -1 | 31773 | 32039 |
| NP_116525.1 | NC_002796_p33 | hypothetical protein | phrog_23345 | unknown function | unknown function | -1 | 27173 | 27949 |
| NP_116523.1 | NC_002796_p31 | hypothetical protein | singleton | unknown function | unknown function | -1 | 24905 | 25210 |
| NP_116530.1 | NC_002796_p38 | hypothetical protein | phrog_130 | anti-repressor Ant | transcription regulation | 1 | 29826 | 30626 |
| NP_116513.1 | NC_002796_p21 | hypothetical protein | phrog_17177 | unknown function | unknown function | 1 | 19902 | 20117 |
| NP_116511.1 | NC_002796_p19 | hypothetical protein | phrog_17177 | unknown function | unknown function | 1 | 18981 | 19181 |
| NP_116553.1 | NC_002796_p60 | hypothetical protein | phrog_15805 | unknown function | unknown function | 1 | 38444 | 38587 |
| NP_116510.1 | NC_002796_p18 | hypothetical protein | phrog_6468 | tail fiber protein; host specificity | tail | 1 | 16178 | 21892 |
| NP_116528.1 | NC_002796_p36 | transcription regulator | phrog_4416 | transcriptional regulator | transcription regulation | 1 | 29155 | 29346 |
| NP_116503.1 | NC_002796_p11 | hypothetical protein | phrog_1217 | tail protein | tail | 1 | 7009 | 7404 |
| NP_116545.1 | NC_002796_p53 | dUTPase | phrog_135 | dUTPase | DNA, RNA and nucleotide metabolism | 1 | 36069 | 36416 |
| NP_116533.1 | NC_002796_p41 | hypothetical protein | phrog_7263 | unknown function | unknown function | 1 | 31112 | 31453 |
| NP_116516.1 | NC_002796_p24 | hypothetical protein | phrog_8250 | unknown function | unknown function | 1 | 21907 | 22143 |
| NP_116538.1 | NC_002796_p46 | hypothetical protein | phrog_124 | Sak4-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 32966 | 33670 |
| NP_116556.1 | NC_002796_p63 | hypothetical protein | phrog_144 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 39434 | 39952 |
| NP_116506.1 | NC_002796_p14 | hypothetical protein | phrog_22898 | unknown function | unknown function | 1 | 8821 | 9312 |
| NP_116504.1 | NC_002796_p12 | major structural protein | phrog_88 | major tail protein | tail | 1 | 7435 | 8028 |
| NP_116501.1 | NC_002796_p9 | hypothetical protein | phrog_25 | head closure Hc1 | connector | 1 | 6151 | 6504 |
| NP_116520.1 | NC_002796_p28 | hypothetical protein | phrog_30499 | unknown function | unknown function | -1 | 22772 | 22996 |
| NP_116494.1 | NC_002796_p2 | large terminase subunit | phrog_9 | terminase large subunit | head and packaging | 1 | 537 | 2510 |
| NP_116502.1 | NC_002796_p10 | hypothetical protein | phrog_5 | tail completion or Neck1 protein | connector | 1 | 6506 | 7012 |
| NP_116555.1 | NC_002796_p62 | hypothetical protein | singleton | unknown function | unknown function | 1 | 39288 | 39416 |
| NP_116512.1 | NC_002796_p20 | hypothetical protein | phrog_17177 | unknown function | unknown function | 1 | 19434 | 19649 |
| NP_116550.1 | NC_002796_p57 | hypothetical protein | phrog_8350 | unknown function | unknown function | 1 | 37604 | 37834 |
| NP_116554.1 | NC_002796_p61 | hypothetical protein | phrog_2198 | Alt-like transcription activator | transcription regulation | 1 | 38664 | 39065 |
| NP_116540.1 | NC_002796_p48 | single stranded DNA binding protein | phrog_378 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 33670 | 34191 |
| NP_116547.1 | NC_002796_p55 | hypothetical protein | phrog_12206 | unknown function | unknown function | -1 | 36746 | 37084 |
| NP_116514.1 | NC_002796_p22 | hypothetical protein | phrog_17177 | unknown function | unknown function | 1 | 20370 | 20585 |
| NP_116541.1 | NC_002796_p49 | replication protein | phrog_270 | replication initiation protein | DNA, RNA and nucleotide metabolism | 1 | 34325 | 35134 |
| NP_116526.1 | NC_002796_p34 | hypothetical protein | singleton | unknown function | unknown function | 1 | 27496 | 27690 |