Genomic map of Streptococcus phage MM1 (NC_003050)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_003050
Definition
Streptococcus pneumoniae bacteriophage MM1 complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.
DB of origin
REFSEQ
Length
40248
Host Name
Streptococcus pneumoniae
Host domain
Bacteria
Is prophage?
undef
Number of proteins
53
%GC
38.41
Number of singletons
0
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
NP_150181.1 NC_003050_p52 holin 2 phrog_608 holin lysis 1 38752 39084
NP_150148.1 NC_003050_p17 hypothetical protein phrog_997 replication terminator DNA, RNA and nucleotide metabolism 1 8929 9363
NP_150170.1 NC_003050_p41 minor capsid protein 3 phrog_556 minor head protein head and packaging 1 22822 23166
NP_150138.1 NC_003050_p6 hypothetical protein phrog_1456 DNA binding protein DNA, RNA and nucleotide metabolism 1 3140 3406
NP_150146.1 NC_003050_p15 methyltransferase phrog_16143 DNA methyltransferase other 1 7631 8056
NP_150139.1 NC_003050_p7 hypothetical protein phrog_2273 unknown function unknown function 1 3638 3904
NP_150150.1 NC_003050_p19 hypothetical protein phrog_774 unknown function unknown function 1 10119 10331
NP_150154.1 NC_003050_p24 hypothetical protein phrog_2003 unknown function unknown function 1 11816 12103
NP_150162.2 NC_003050_p33 minor capsid protein 1 phrog_533 portal protein head and packaging 1 17260 18828
NP_758431.1 NC_003050_p30 hypothetical protein phrog_5057 unknown function unknown function 1 14542 15288
NP_758428.1 NC_003050_p27 hypothetical protein phrog_236 nucleotide kinase other 1 12770 13012
NP_150147.1 NC_003050_p16 hypothetical protein phrog_3947 unknown function unknown function 1 8672 8875
NP_150151.1 NC_003050_p20 hypothetical protein phrog_34 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 10342 10743
NP_150143.1 NC_003050_p11 hypothetical protein phrog_674 unknown function unknown function 1 5729 6721
NP_150176.1 NC_003050_p47 minor structural protein phrog_202 distal tail protein Dit tail 1 28425 29939
NP_150182.1 NC_003050_p53 N-acetylmuramoyl-L-alanine amidase phrog_1110 endolysin lysis 1 39088 40044
NP_150136.1 NC_003050_p4 repressor protein phrog_8 transcriptional regulator transcription regulation -1 2115 2477
NP_150173.1 NC_003050_p44 hypothetical protein phrog_1061 unknown function unknown function 1 24084 24572
NP_150171.1 NC_003050_p42 minor capsid protein 4 phrog_913 minor head protein head and packaging 1 23166 23573
NP_150149.1 NC_003050_p18 hypothetical protein phrog_1029 unknown function unknown function 1 9365 10102
NP_758432.1 NC_003050_p31 hypothetical protein phrog_2412 unknown function unknown function 1 15492 15947
NP_150180.1 NC_003050_p51 holin 1 phrog_199 holin lysis 1 38332 38748
NP_150172.1 NC_003050_p43 major tail shaft protein phrog_820 major tail protein tail 1 23570 24019
NP_150179.1 NC_003050_p50 hypothetical protein phrog_2566 unknown function unknown function 1 38053 38322
NP_150169.1 NC_003050_p40 minor capsid protein 2 phrog_793 head-tail adaptor connector 1 22451 22822
NP_150166.1 NC_003050_p37 hypothetical protein phrog_840 major head protein head and packaging 1 20902 21789
NP_150133.1 NC_003050_p1 integrase phrog_1 integrase integration and excision -1 103 1230
NP_150140.1 NC_003050_p8 hypothetical protein phrog_13947 unknown function unknown function 1 3985 4509
NP_150144.1 NC_003050_p13 SSB protein phrog_44 single strand DNA binding protein DNA, RNA and nucleotide metabolism 1 6909 7454
NP_150165.1 NC_003050_p36 scaffolding protein phrog_194 head scaffolding protein head and packaging 1 20321 20884
NP_150167.1 NC_003050_p38 hypothetical protein phrog_2910 unknown function unknown function 1 21793 22026
NP_150164.1 NC_003050_p35 hypothetical protein phrog_581 minor head protein head and packaging 1 19031 20182
NP_150155.1 NC_003050_p25 hypothetical protein phrog_4667 unknown function unknown function 1 12103 12276
NP_150145.1 NC_003050_p14 DNA methylase phrog_116 DNA methyltransferase other 1 7480 8637
NP_758426.1 NC_003050_p12 hypothetical protein phrog_4139 unknown function unknown function 1 6743 6919
NP_150175.1 NC_003050_p46 minor tail protein phrog_1686 tail length tape measure protein tail 1 25147 28428
NP_758429.1 NC_003050_p28 hypothetical protein phrog_3511 unknown function unknown function 1 13009 13401
NP_150142.1 NC_003050_p10 Erf protein phrog_155 Erf-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 5019 5726
NP_758427.1 NC_003050_p21 hypothetical protein phrog_4706 unknown function unknown function 1 10745 10942
NP_150177.1 NC_003050_p48 anti-receptor protein phrog_588 tail fiber protein and host specificity tail 1 29941 35910
NP_150135.1 NC_003050_p3 hypothetical protein phrog_87 metallo-protease other -1 1713 2093
NP_758425.1 NC_003050_p9 hypothetical protein phrog_2715 unknown function unknown function 1 4561 5013
NP_150137.1 NC_003050_p5 hypothetical protein phrog_1337 DNA binding protein DNA, RNA and nucleotide metabolism 1 2774 2965
NP_150156.1 NC_003050_p26 hypothetical protein phrog_98 unknown function unknown function 1 12291 12710
NP_150174.1 NC_003050_p45 hypothetical protein phrog_706 unknown function unknown function 1 24585 25154
NP_150163.1 NC_003050_p34 hypothetical protein phrog_3755 unknown function unknown function 1 18761 18988
NP_150152.1 NC_003050_p22 hypothetical protein phrog_834 unknown function unknown function 1 11000 11317
NP_150161.1 NC_003050_p32 large terminase subunit phrog_2 terminase large subunit head and packaging 1 15937 17247
NP_150153.1 NC_003050_p23 hypothetical protein phrog_121 unknown function unknown function 1 11319 11816
NP_150178.1 NC_003050_p49 hypothetical protein phrog_372 tail protein tail 1 35921 37999
NP_758430.1 NC_003050_p29 hypothetical protein phrog_940 nuclease DNA, RNA and nucleotide metabolism 1 13467 14561
NP_150134.1 NC_003050_p2 hypothetical protein phrog_9859 unknown function unknown function -1 1349 1699
NP_150168.1 NC_003050_p39 hypothetical protein phrog_541 head-tail adaptor connector 1 22069 22461