| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_003157 |
Definition |
Streptococcus pyogenes strain NIH1 putative methionine sulfoxide |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae. |
DB of origin |
REFSEQ |
Length |
43106 |
Host Name |
Streptococcus |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
56 |
%GC |
38.64 |
Number of singletons |
1 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| NP_438160.1 | NC_003157_p48 | hypothetical protein-phage associated | phrog_1554 | unknown function | unknown function | 1 | 36284 | 36895 |
| NP_438135.1 | NC_003157_p23 | hypothetical protein-phage associated | phrog_248 | transcriptional activator | transcription regulation | 1 | 13401 | 13841 |
| NP_438136.1 | NC_003157_p24 | hypothetical protein-phage associated | phrog_620 | ParB-like partition protein | DNA, RNA and nucleotide metabolism | 1 | 14818 | 15336 |
| NP_438122.1 | NC_003157_p10 | hypothetical protein-phage associated | phrog_3682 | unknown function | unknown function | 1 | 7856 | 8089 |
| NP_438165.1 | NC_003157_p53 | hypothetical protein-phage associated | phrog_5763 | unknown function | unknown function | 1 | 39349 | 40215 |
| NP_438125.1 | NC_003157_p13 | recombination protein | phrog_155 | Erf-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 8996 | 9670 |
| NP_438167.1 | NC_003157_p55 | hypothetical protein-phage associated | phrog_11353 | unknown function | unknown function | 1 | 41774 | 42349 |
| NP_438126.1 | NC_003157_p14 | single-strand binding protein | phrog_44 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 9663 | 10082 |
| NP_438166.1 | NC_003157_p54 | SpeL | phrog_1753 | enterotoxin type A / speL | moron, auxiliary metabolic gene and host takeover | 1 | 40519 | 41298 |
| NP_438118.1 | NC_003157_p6 | antirepressor | phrog_63 | anti-repressor Ant | transcription regulation | 1 | 4922 | 5650 |
| NP_438113.1 | NC_003157_p1 | methionine sulfoxide reductase | phrog_35155 | unknown function | unknown function | 1 | 149 | 1255 |
| NP_438139.1 | NC_003157_p27 | hypothetical protein-phage associated | phrog_2412 | unknown function | unknown function | 1 | 16864 | 17346 |
| NP_438128.1 | NC_003157_p16 | hypothetical protein-phage associated | phrog_140 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 10378 | 10731 |
| NP_438168.1 | NC_003157_p56 | hypothetical protein-phage associated | singleton | unknown function | unknown function | 1 | 42418 | 42630 |
| NP_438124.1 | NC_003157_p12 | hypothetical protein-phage associated | phrog_253 | Mu Gam-like end protection | DNA, RNA and nucleotide metabolism | 1 | 8513 | 8995 |
| NP_438164.1 | NC_003157_p52 | hypothetical protein-phage associated | phrog_1281 | unknown function | unknown function | 1 | 38837 | 39361 |
| NP_438142.1 | NC_003157_p30 | minor capsid protein | phrog_581 | minor head protein | head and packaging | 1 | 20161 | 21639 |
| NP_438146.1 | NC_003157_p34 | major capsid protein | phrog_544 | major head protein | head and packaging | 1 | 22922 | 23740 |
| NP_438149.1 | NC_003157_p37 | minor capsid protein | phrog_556 | minor head protein | head and packaging | 1 | 24532 | 24888 |
| NP_438137.1 | NC_003157_p25 | ABC transporter | phrog_293 | ABC transporter | moron, auxiliary metabolic gene and host takeover | 1 | 15315 | 15992 |
| NP_438143.1 | NC_003157_p31 | hypothetical protein-phage associated | phrog_11448 | unknown function | unknown function | 1 | 21611 | 21850 |
| NP_438153.1 | NC_003157_p41 | hypothetical protein-phage associated | phrog_706 | unknown function | unknown function | 1 | 26245 | 26826 |
| NP_438161.1 | NC_003157_p49 | hypothetical protein-phage associated | phrog_1009 | unknown function | unknown function | 1 | 36906 | 37202 |
| NP_438144.1 | NC_003157_p32 | hypothetical protein-phage associated | phrog_903 | unknown function | unknown function | 1 | 21912 | 22178 |
| NP_438148.1 | NC_003157_p36 | minor capsid protein | phrog_793 | head-tail adaptor | connector | 1 | 24200 | 24532 |
| NP_438116.1 | NC_003157_p4 | hypothetical protein-phage associated | phrog_87 | metallo-protease | other | -1 | 3171 | 3551 |
| NP_438130.1 | NC_003157_p18 | hypothetical protein-phage associated | phrog_236 | nucleotide kinase | other | 1 | 11326 | 11610 |
| NP_438141.1 | NC_003157_p29 | minor capsid protein | phrog_533 | portal protein | head and packaging | 1 | 18654 | 20156 |
| NP_438131.1 | NC_003157_p19 | hypothetical protein-phage associated | phrog_5030 | unknown function | unknown function | 1 | 11607 | 11876 |
| NP_438117.1 | NC_003157_p5 | repressor protein | phrog_8 | transcriptional regulator | transcription regulation | -1 | 3565 | 3924 |
| NP_438157.1 | NC_003157_p45 | hyaluronidase | phrog_2332 | hyaluronidase | other | 1 | 32927 | 33940 |
| NP_438114.1 | NC_003157_p2 | integrase-like protein | phrog_1 | integrase | integration and excision | -1 | 1366 | 2463 |
| NP_438120.1 | NC_003157_p8 | hypothetical protein-phage associated | phrog_3050 | unknown function | unknown function | 1 | 6804 | 6989 |
| NP_438155.1 | NC_003157_p43 | hypothetical protein-phage associated | phrog_33 | distal tail protein Dit | tail | 1 | 30073 | 30789 |
| NP_438147.1 | NC_003157_p35 | hypothetical protein-phage associated | phrog_541 | head-tail adaptor | connector | 1 | 23875 | 24210 |
| NP_438151.1 | NC_003157_p39 | tail protein | phrog_820 | major tail protein | tail | 1 | 25283 | 25768 |
| NP_438121.1 | NC_003157_p9 | hypothetical protein-phage associated | phrog_4016 | replication initiation protein | DNA, RNA and nucleotide metabolism | 1 | 7462 | 7875 |
| NP_438134.1 | NC_003157_p22 | hypothetical protein-phage associated | phrog_121 | unknown function | unknown function | 1 | 12454 | 12960 |
| NP_438150.1 | NC_003157_p38 | minor capsid protein | phrog_913 | minor head protein | head and packaging | 1 | 24885 | 25283 |
| NP_438127.1 | NC_003157_p15 | hypothetical protein-phage associated | phrog_803 | host nuclease inhibitor | moron, auxiliary metabolic gene and host takeover | 1 | 10088 | 10291 |
| NP_438115.1 | NC_003157_p3 | hypothetical protein-phage associated | phrog_5214 | unknown function | unknown function | -1 | 2639 | 3031 |
| NP_438132.1 | NC_003157_p20 | hypothetical protein-phage associated | phrog_98 | unknown function | unknown function | 1 | 11886 | 12290 |
| NP_438156.1 | NC_003157_p44 | hypothetical protein-phage associated | phrog_2270 | unknown function | unknown function | 1 | 30786 | 32930 |
| NP_438159.1 | NC_003157_p47 | hypothetical protein-phage associated | phrog_1401 | unknown function | unknown function | 1 | 35850 | 36281 |
| NP_438162.1 | NC_003157_p50 | hypothetical protein-phage associated | phrog_443 | holin | lysis | 1 | 37199 | 37384 |
| NP_438129.1 | NC_003157_p17 | hypothetical protein-phage associated | phrog_4161 | unknown function | unknown function | 1 | 11081 | 11332 |
| NP_438145.1 | NC_003157_p33 | hypothetical protein-phage associated | phrog_2303 | head scaffolding protein | head and packaging | 1 | 22310 | 22918 |
| NP_438119.1 | NC_003157_p7 | hypothetical protein-phage associated | phrog_4621 | unknown function | unknown function | 1 | 5683 | 5832 |
| NP_438154.1 | NC_003157_p42 | tail protein | phrog_1686 | tail length tape measure protein | tail | 1 | 26816 | 30076 |
| NP_438152.1 | NC_003157_p40 | hypothetical protein-phage associated | phrog_1061 | unknown function | unknown function | 1 | 25807 | 26241 |
| NP_438140.1 | NC_003157_p28 | terminase large subunit | phrog_2 | terminase large subunit | head and packaging | 1 | 17513 | 18640 |
| NP_438133.1 | NC_003157_p21 | hypothetical protein-phage associated | phrog_2625 | unknown function | unknown function | 1 | 12287 | 12457 |
| NP_438123.1 | NC_003157_p11 | hypothetical protein-phage associated | phrog_2410 | unknown function | unknown function | 1 | 8216 | 8491 |
| NP_438138.1 | NC_003157_p26 | hypothetical protein-phage associated | phrog_3136 | unknown function | unknown function | 1 | 16445 | 16822 |
| NP_438158.1 | NC_003157_p46 | hypothetical protein-phage associated | phrog_1899 | unknown function | unknown function | 1 | 33955 | 35838 |
| NP_438163.1 | NC_003157_p51 | cell wall hydrolase | phrog_1309 | endolysin | lysis | 1 | 37495 | 38697 |