Genomic map of Temperate phage phiNIH1.1 (NC_003157)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_003157
Definition
Streptococcus pyogenes strain NIH1 putative methionine sulfoxide
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.
DB of origin
REFSEQ
Length
43106
Host Name
Streptococcus
Host domain
Bacteria
Is prophage?
undef
Number of proteins
56
%GC
38.64
Number of singletons
1
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
NP_438160.1 NC_003157_p48 hypothetical protein-phage associated phrog_1554 unknown function unknown function 1 36284 36895
NP_438135.1 NC_003157_p23 hypothetical protein-phage associated phrog_248 transcriptional activator transcription regulation 1 13401 13841
NP_438136.1 NC_003157_p24 hypothetical protein-phage associated phrog_620 ParB-like partition protein DNA, RNA and nucleotide metabolism 1 14818 15336
NP_438122.1 NC_003157_p10 hypothetical protein-phage associated phrog_3682 unknown function unknown function 1 7856 8089
NP_438165.1 NC_003157_p53 hypothetical protein-phage associated phrog_5763 unknown function unknown function 1 39349 40215
NP_438125.1 NC_003157_p13 recombination protein phrog_155 Erf-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 8996 9670
NP_438167.1 NC_003157_p55 hypothetical protein-phage associated phrog_11353 unknown function unknown function 1 41774 42349
NP_438126.1 NC_003157_p14 single-strand binding protein phrog_44 single strand DNA binding protein DNA, RNA and nucleotide metabolism 1 9663 10082
NP_438166.1 NC_003157_p54 SpeL phrog_1753 enterotoxin type A / speL moron, auxiliary metabolic gene and host takeover 1 40519 41298
NP_438118.1 NC_003157_p6 antirepressor phrog_63 anti-repressor Ant transcription regulation 1 4922 5650
NP_438113.1 NC_003157_p1 methionine sulfoxide reductase phrog_35155 unknown function unknown function 1 149 1255
NP_438139.1 NC_003157_p27 hypothetical protein-phage associated phrog_2412 unknown function unknown function 1 16864 17346
NP_438128.1 NC_003157_p16 hypothetical protein-phage associated phrog_140 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 10378 10731
NP_438168.1 NC_003157_p56 hypothetical protein-phage associated singleton unknown function unknown function 1 42418 42630
NP_438124.1 NC_003157_p12 hypothetical protein-phage associated phrog_253 Mu Gam-like end protection DNA, RNA and nucleotide metabolism 1 8513 8995
NP_438164.1 NC_003157_p52 hypothetical protein-phage associated phrog_1281 unknown function unknown function 1 38837 39361
NP_438142.1 NC_003157_p30 minor capsid protein phrog_581 minor head protein head and packaging 1 20161 21639
NP_438146.1 NC_003157_p34 major capsid protein phrog_544 major head protein head and packaging 1 22922 23740
NP_438149.1 NC_003157_p37 minor capsid protein phrog_556 minor head protein head and packaging 1 24532 24888
NP_438137.1 NC_003157_p25 ABC transporter phrog_293 ABC transporter moron, auxiliary metabolic gene and host takeover 1 15315 15992
NP_438143.1 NC_003157_p31 hypothetical protein-phage associated phrog_11448 unknown function unknown function 1 21611 21850
NP_438153.1 NC_003157_p41 hypothetical protein-phage associated phrog_706 unknown function unknown function 1 26245 26826
NP_438161.1 NC_003157_p49 hypothetical protein-phage associated phrog_1009 unknown function unknown function 1 36906 37202
NP_438144.1 NC_003157_p32 hypothetical protein-phage associated phrog_903 unknown function unknown function 1 21912 22178
NP_438148.1 NC_003157_p36 minor capsid protein phrog_793 head-tail adaptor connector 1 24200 24532
NP_438116.1 NC_003157_p4 hypothetical protein-phage associated phrog_87 metallo-protease other -1 3171 3551
NP_438130.1 NC_003157_p18 hypothetical protein-phage associated phrog_236 nucleotide kinase other 1 11326 11610
NP_438141.1 NC_003157_p29 minor capsid protein phrog_533 portal protein head and packaging 1 18654 20156
NP_438131.1 NC_003157_p19 hypothetical protein-phage associated phrog_5030 unknown function unknown function 1 11607 11876
NP_438117.1 NC_003157_p5 repressor protein phrog_8 transcriptional regulator transcription regulation -1 3565 3924
NP_438157.1 NC_003157_p45 hyaluronidase phrog_2332 hyaluronidase other 1 32927 33940
NP_438114.1 NC_003157_p2 integrase-like protein phrog_1 integrase integration and excision -1 1366 2463
NP_438120.1 NC_003157_p8 hypothetical protein-phage associated phrog_3050 unknown function unknown function 1 6804 6989
NP_438155.1 NC_003157_p43 hypothetical protein-phage associated phrog_33 distal tail protein Dit tail 1 30073 30789
NP_438147.1 NC_003157_p35 hypothetical protein-phage associated phrog_541 head-tail adaptor connector 1 23875 24210
NP_438151.1 NC_003157_p39 tail protein phrog_820 major tail protein tail 1 25283 25768
NP_438121.1 NC_003157_p9 hypothetical protein-phage associated phrog_4016 replication initiation protein DNA, RNA and nucleotide metabolism 1 7462 7875
NP_438134.1 NC_003157_p22 hypothetical protein-phage associated phrog_121 unknown function unknown function 1 12454 12960
NP_438150.1 NC_003157_p38 minor capsid protein phrog_913 minor head protein head and packaging 1 24885 25283
NP_438127.1 NC_003157_p15 hypothetical protein-phage associated phrog_803 host nuclease inhibitor moron, auxiliary metabolic gene and host takeover 1 10088 10291
NP_438115.1 NC_003157_p3 hypothetical protein-phage associated phrog_5214 unknown function unknown function -1 2639 3031
NP_438132.1 NC_003157_p20 hypothetical protein-phage associated phrog_98 unknown function unknown function 1 11886 12290
NP_438156.1 NC_003157_p44 hypothetical protein-phage associated phrog_2270 unknown function unknown function 1 30786 32930
NP_438159.1 NC_003157_p47 hypothetical protein-phage associated phrog_1401 unknown function unknown function 1 35850 36281
NP_438162.1 NC_003157_p50 hypothetical protein-phage associated phrog_443 holin lysis 1 37199 37384
NP_438129.1 NC_003157_p17 hypothetical protein-phage associated phrog_4161 unknown function unknown function 1 11081 11332
NP_438145.1 NC_003157_p33 hypothetical protein-phage associated phrog_2303 head scaffolding protein head and packaging 1 22310 22918
NP_438119.1 NC_003157_p7 hypothetical protein-phage associated phrog_4621 unknown function unknown function 1 5683 5832
NP_438154.1 NC_003157_p42 tail protein phrog_1686 tail length tape measure protein tail 1 26816 30076
NP_438152.1 NC_003157_p40 hypothetical protein-phage associated phrog_1061 unknown function unknown function 1 25807 26241
NP_438140.1 NC_003157_p28 terminase large subunit phrog_2 terminase large subunit head and packaging 1 17513 18640
NP_438133.1 NC_003157_p21 hypothetical protein-phage associated phrog_2625 unknown function unknown function 1 12287 12457
NP_438123.1 NC_003157_p11 hypothetical protein-phage associated phrog_2410 unknown function unknown function 1 8216 8491
NP_438138.1 NC_003157_p26 hypothetical protein-phage associated phrog_3136 unknown function unknown function 1 16445 16822
NP_438158.1 NC_003157_p46 hypothetical protein-phage associated phrog_1899 unknown function unknown function 1 33955 35838
NP_438163.1 NC_003157_p51 cell wall hydrolase phrog_1309 endolysin lysis 1 37495 38697