Genomic map of Listeria phage A118 (NC_003216)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_003216
Definition
Listeria phage A118, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.
DB of origin
REFSEQ
Length
40834
Host Name
Listeria monocytogenes
Host domain
Bacteria
Is prophage?
undef
Number of proteins
72
%GC
36.1
Number of singletons
4
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
NP_463490.1 NC_003216_p29 hypothetical protein phrog_8590 unknown function unknown function -1 22430 22780
NP_463528.1 NC_003216_p67 hypothetical protein phrog_1682 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 38545 38949
NP_463469.1 NC_003216_p8 hypothetical protein phrog_541 head-tail adaptor connector 1 6242 6637
NP_463512.1 NC_003216_p51 hypothetical protein phrog_434 RecE-like recombination exonuclease DNA, RNA and nucleotide metabolism 1 31811 32770
NP_463500.1 NC_003216_p39 gp37-1 phrog_9136 unknown function unknown function -1 28077 28307
NP_463515.1 NC_003216_p54 methyltransferase phrog_954 DNA methyltransferase other 1 34537 35001
NP_463489.1 NC_003216_p28 hypothetical protein phrog_8 transcriptional regulator transcription regulation -1 21976 22425
NP_463516.1 NC_003216_p55 hypothetical protein phrog_121 unknown function unknown function 1 34998 35558
NP_463518.1 NC_003216_p57 hypothetical protein singleton unknown function unknown function 1 35717 35782
NP_463508.1 NC_003216_p47 hypothetical protein phrog_1124 transcriptional regulator transcription regulation 1 30645 31178
NP_463531.1 NC_003216_p70 hypothetical protein phrog_248 transcriptional activator transcription regulation 1 39261 39695
NP_463496.1 NC_003216_p35 hypothetical protein phrog_87 metallo-protease other -1 26681 27172
NP_463520.1 NC_003216_p59 hypothetical protein phrog_4124 unknown function unknown function 1 36177 36386
NP_463492.1 NC_003216_p31 integrase phrog_95 integrase integration and excision -1 23518 24876
NP_463466.1 NC_003216_p5 scaffolding protein phrog_194 head scaffolding protein head and packaging 1 4590 5159
NP_463478.1 NC_003216_p17 hypothetical protein phrog_33 distal tail protein Dit tail 1 14928 15746
NP_463482.1 NC_003216_p21 hypothetical protein phrog_5036 unknown function unknown function 1 18894 19211
NP_463470.1 NC_003216_p9 hypothetical protein phrog_793 head-tail adaptor connector 1 6637 6999
NP_463472.1 NC_003216_p11 hypothetical protein phrog_913 minor head protein head and packaging 1 7337 7744
NP_463467.1 NC_003216_p6 major capsid protein phrog_10 major head protein head and packaging 1 5183 6082
NP_463494.1 NC_003216_p33 hypothetical protein phrog_9828 unknown function unknown function -1 25702 26424
NP_463463.1 NC_003216_p2 terminase large subunit phrog_2 terminase large subunit head and packaging 1 532 1863
NP_463474.1 NC_003216_p13 hypothetical protein phrog_215 structural protein with Ig domain head and packaging 1 8111 8443
NP_463517.1 NC_003216_p56 hypothetical protein phrog_18091 unknown function unknown function 1 35555 35701
NP_463524.1 NC_003216_p63 hypothetical protein phrog_5780 unknown function unknown function 1 37225 37626
NP_463499.1 NC_003216_p38 hypothetical protein phrog_5868 unknown function unknown function 1 27882 28148
NP_463497.1 NC_003216_p36 repressor protein phrog_8 transcriptional regulator transcription regulation -1 27205 27510
NP_463519.1 NC_003216_p58 hypothetical protein phrog_18487 unknown function unknown function 1 35779 36180
NP_463495.1 NC_003216_p34 hypothetical protein phrog_6586 unknown function unknown function -1 26440 26658
NP_463475.1 NC_003216_p14 hypothetical protein phrog_1061 unknown function unknown function 1 8498 8920
NP_463529.1 NC_003216_p68 hypothetical protein phrog_7279 unknown function unknown function 1 38942 39067
NP_463480.1 NC_003216_p19 hypothetical protein phrog_4577 tail protein tail 1 16781 17809
NP_463505.1 NC_003216_p44 hypothetical protein phrog_5996 unknown function unknown function 1 29189 29470
NP_463488.1 NC_003216_p27 hypothetical protein phrog_1758 acetyltransferase other 1 21307 21906
NP_463514.1 NC_003216_p53 hypothetical protein phrog_186 DnaD-like helicase loader DNA, RNA and nucleotide metabolism 1 33608 34540
NP_463462.1 NC_003216_p1 terminase small subunit phrog_51 terminase small subunit head and packaging 1 21 563
NP_463485.1 NC_003216_p24 holin phrog_1299 holin lysis 1 19771 20061
NP_463533.1 NC_003216_p72 hypothetical protein phrog_20623 unknown function unknown function 1 40061 40771
NP_463526.1 NC_003216_p65 hypothetical protein phrog_5229 unknown function unknown function 1 38137 38442
NP_463481.1 NC_003216_p20 hypothetical protein phrog_3285 minor tail protein tail 1 17809 18882
NP_463473.1 NC_003216_p12 major tail shaft protein phrog_820 major tail protein tail 1 7747 8181
NP_463522.1 NC_003216_p61 hypothetical protein phrog_38252 unknown function unknown function 1 36787 36897
NP_463465.1 NC_003216_p4 hypothetical protein phrog_581 minor head protein head and packaging 1 3372 4511
NP_463477.1 NC_003216_p16 tape-measure protein phrog_1686 tail length tape measure protein tail 1 9542 14926
NP_463491.1 NC_003216_p30 hypothetical protein phrog_8305 unknown function unknown function -1 22812 23189
NP_463525.1 NC_003216_p64 SSB protein phrog_44 single strand DNA binding protein DNA, RNA and nucleotide metabolism 1 37623 38105
NP_463530.1 NC_003216_p69 hypothetical protein phrog_11352 unknown function unknown function 1 39078 39242
NP_463483.1 NC_003216_p22 hypothetical protein phrog_1382 unknown function unknown function 1 19216 19374
NP_463479.1 NC_003216_p18 hypothetical protein phrog_326 tail protein with endopeptidase domain other 1 15755 16780
NP_463503.1 NC_003216_p42 gp39-1 singleton unknown function unknown function -1 28722 28889
NP_463486.1 NC_003216_p25 L-alanoyl-D-glutamate peptidase phrog_5115 ferredoxin moron, auxiliary metabolic gene and host takeover 1 20061 20906
NP_463527.1 NC_003216_p66 hypothetical protein phrog_19625 unknown function unknown function 1 38439 38579
NP_463471.1 NC_003216_p10 hypothetical protein phrog_556 minor head protein head and packaging 1 6999 7337
NP_463476.1 NC_003216_p15 hypothetical protein phrog_706 unknown function unknown function 1 8926 9531
NP_463498.1 NC_003216_p37 repressor protein phrog_3 transcriptional repressor transcription regulation 1 27636 27878
NP_463523.1 NC_003216_p62 hypothetical protein phrog_35774 unknown function unknown function 1 36897 36989
NP_463521.1 NC_003216_p60 hypothetical protein phrog_15755 unknown function unknown function 1 36383 36781
NP_463506.1 NC_003216_p45 gp41-1 phrog_9188 unknown function unknown function -1 29472 29669
NP_463502.1 NC_003216_p41 hypothetical protein singleton unknown function unknown function 1 28565 28720
NP_463493.1 NC_003216_p32 hypothetical protein phrog_11062 unknown function unknown function -1 24940 25680
NP_463468.1 NC_003216_p7 hypothetical protein phrog_2250 unknown function unknown function 1 6082 6240
NP_463464.1 NC_003216_p3 portal protein phrog_533 portal protein head and packaging 1 1876 3366
NP_463501.1 NC_003216_p40 hypothetical protein phrog_14214 unknown function unknown function 1 28372 28548
NP_463532.1 NC_003216_p71 hypothetical protein singleton unknown function unknown function 1 39741 39824
NP_463513.1 NC_003216_p52 recombinase phrog_148 RecT-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 32773 33588
NP_463511.1 NC_003216_p50 hypothetical protein phrog_23908 unknown function unknown function 1 31578 31664
NP_463509.1 NC_003216_p48 hypothetical protein phrog_8384 unknown function unknown function 1 31175 31393
NP_463507.1 NC_003216_p46 anti-repressor promoter phrog_63 anti-repressor Ant transcription regulation 1 29733 30521
NP_463510.1 NC_003216_p49 hypothetical protein phrog_5174 unknown function unknown function 1 31390 31578
NP_463487.1 NC_003216_p26 hypothetical protein phrog_23326 unknown function unknown function 1 21144 21320
NP_463484.1 NC_003216_p23 hypothetical protein phrog_8806 unknown function unknown function 1 19402 19767
NP_463504.1 NC_003216_p43 hypothetical protein phrog_8019 unknown function unknown function 1 28956 29192