Genomic map of Escherichia virus M13 (NC_003287)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_003287
Definition
Enterobacteria phage M13, complete genome.
Molecule type
ss-DNA
Genome structure
circular
Taxonomy
Viruses; Monodnaviria; Loebvirae; Hofneiviricota; Faserviricetes; Tubulavirales; Inoviridae; Inovirus.
DB of origin
REFSEQ
Length
6407
Host Name
Escherichia coli
Host domain
Bacteria
Is prophage?
undef
Number of proteins
10
%GC
40.73
Number of singletons
0
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
NP_510890.1 NC_003287_p6 major coat protein phrog_1646 major coat protein head and packaging 1 1301 1522
NP_510889.1 NC_003287_p5 minor coat protein phrog_10143 minor coat protein head and packaging 1 1206 1304
NP_510886.1 NC_003287_p2 gene X product phrog_8855 replication protein DNA, RNA and nucleotide metabolism 1 496 831
NP_510894.1 NC_003287_p10 phage assembly protein phrog_1012 assembly (protein IV of M13) head and packaging 1 4220 5500
NP_510891.1 NC_003287_p7 attachment protein phrog_8482 attachment protein head and packaging 1 1579 2853
NP_510892.1 NC_003287_p8 minor coat protein phrog_1944 minor head protein head and packaging 1 2856 3194
NP_510893.1 NC_003287_p9 assembly protein phrog_1675 morphogenesis (protein I of M13) head and packaging 1 3196 4242
NP_510885.1 NC_003287_p1 replication initiation protein phrog_702 replication protein DNA, RNA and nucleotide metabolism 1 1 831
NP_510885.1 NC_003287_p1 replication initiation protein phrog_702 replication protein DNA, RNA and nucleotide metabolism 1 6006 6407
NP_510888.1 NC_003287_p4 minor coat protein phrog_7781 minor coat protein head and packaging 1 1108 1209
NP_510887.1 NC_003287_p3 helix destabilising protein phrog_1199 single strand DNA binding protein DNA, RNA and nucleotide metabolism 1 843 1106