Genomic map of Enterobacteria phage T3 (NC_003298)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_003298
Definition
Enterobacteria phage T3, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Autographiviridae; Studiervirinae; Teetrevirus; Escherichia virus T3.
DB of origin
REFSEQ
Length
38208
Host Name
Escherichia coli
Host domain
Bacteria
Is prophage?
undef
Number of proteins
55
%GC
49.9
Number of singletons
1
Number of paralogs
3

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
NP_523298.1 NC_003298_p3 gene 0.6 protein phrog_2385 unknown function unknown function 1 1430 1627
NP_523309.1 NC_003298_p14 hypothetical protein phrog_1312 unknown function unknown function 1 8539 8670
NP_523314.1 NC_003298_p19 gene 3.7 protein phrog_17413 unknown function unknown function 1 10497 10604
NP_523306.1 NC_003298_p11 gene 1.5 protein phrog_10145 unknown function unknown function 1 7714 7791
NP_523322.1 NC_003298_p27 gene 5B protein phrog_15971 DNA polymerase I DNA, RNA and nucleotide metabolism 1 14039 15157
NP_523341.1 NC_003298_p46 internal virion protein D phrog_342 internal virion protein with endolysin domain head and packaging 1 28803 32759
NP_523319.1 NC_003298_p24 hypothetical protein phrog_2254 unknown function unknown function 1 12691 12975
NP_523327.1 NC_003298_p32 exonuclease phrog_107 exonuclease DNA, RNA and nucleotide metabolism 1 16137 17045
NP_523337.1 NC_003298_p42 tail tubular protein B phrog_457 tail protein tail 1 23031 25436
NP_523332.1 NC_003298_p37 head-to-tail joining protein phrog_449 head-tail adaptor connector 1 18093 19700
NP_523340.1 NC_003298_p45 internal virion protein C phrog_1339 internal virion protein head and packaging 1 26530 28776
NP_523307.1 NC_003298_p12 hypothetical protein phrog_1777 unknown function unknown function 1 7804 8061
NP_523347.1 NC_003298_p52 DNA packaging protein B phrog_38 terminase large subunit head and packaging 1 35591 37351
NP_523305.1 NC_003298_p10 ATP-dependent DNA ligase phrog_114 ATP-dependent DNA ligase DNA, RNA and nucleotide metabolism 1 6595 7635
NP_523342.1 NC_003298_p47 tail fiber protein phrog_4242 tail fiber protein tail 1 32832 34508
NP_523345.1 NC_003298_p50 phage lambda Rz-like lysis protein phrog_1327 Rz-like spanin lysis 1 35138 35581
NP_523310.1 NC_003298_p15 inhibitor of host bacterial RNA polymerase phrog_1307 RNA polymerase inhibitor DNA, RNA and nucleotide metabolism 1 8672 8836
NP_523349.1 NC_003298_p54 hypothetical protein phrog_8173 unknown function unknown function 1 36774 36947
NP_523346.1 NC_003298_p51 phage lambda Rz1-like protein phrog_4306 Rz-like spanin lysis 1 35253 35504
NP_523343.1 NC_003298_p48 type II holin phrog_920 holin lysis 1 34567 34770
NP_523308.1 NC_003298_p13 gene 1.7 protein phrog_4943 unknown function unknown function 1 8061 8552
NP_523313.1 NC_003298_p18 lysozyme phrog_822 amidase lysis 1 10037 10492
NP_523326.1 NC_003298_p31 host recBCD nuclease inhibitor phrog_9014 Gp5.9-like inihibitor of recBCD nuclease moron, auxiliary metabolic gene and host takeover 1 15992 16150
NP_523334.1 NC_003298_p39 minor capsid protein phrog_267 major head protein head and packaging 1 20891 22191
NP_523302.1 NC_003298_p7 gene 1.05 protein phrog_6379 unknown function unknown function 1 5717 5989
NP_523311.1 NC_003298_p16 single-stranded DNA-binding protein phrog_112 Gp2.5-like ssDNA binding protein and ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 8888 9586
NP_523301.1 NC_003298_p6 T3/T7-like RNA polymerase phrog_414 RNA polymerase DNA, RNA and nucleotide metabolism 1 2976 5630
NP_523315.1 NC_003298_p20 DNA primase/helicase phrog_239 DNA primase/helicase DNA, RNA and nucleotide metabolism 1 10670 12370
NP_523323.1 NC_003298_p28 gene 5.3 protein phrog_1872 endonuclease DNA, RNA and nucleotide metabolism 1 15168 15473
NP_523296.1 NC_003298_p1 S-adenosyl-L-methionine hydrolase phrog_2226 SAM-dependent methyltransferase other 1 901 1359
NP_523344.1 NC_003298_p49 DNA packaging protein, small subunit phrog_1351 terminase small subunit head and packaging 1 34775 35044
NP_523318.1 NC_003298_p23 hypothetical protein phrog_1950 unknown function unknown function 1 12466 12678
NP_523299.1 NC_003298_p4 gene 0.65 protein phrog_10380 unknown function unknown function 1 1614 1781
NP_523317.1 NC_003298_p22 hypothetical protein phrog_5140 unknown function unknown function 1 12090 12419
NP_523329.1 NC_003298_p34 hypothetical protein phrog_1447 unknown function unknown function 1 17234 17479
NP_523336.1 NC_003298_p41 tail tubular protein A phrog_446 tail protein tail 1 22425 23015
NP_523335.1 NC_003298_p40 major capsid protein phrog_267 major head protein head and packaging 1 20891 21934
NP_523316.1 NC_003298_p21 helicase phrog_239 DNA primase/helicase DNA, RNA and nucleotide metabolism 1 10856 12370
NP_523304.1 NC_003298_p9 host dGTPase inhibitor phrog_2949 dGTPase inhibitor; target for F exclusion other 1 6222 6500
NP_523312.1 NC_003298_p17 endonuclease I phrog_945 endonuclease DNA, RNA and nucleotide metabolism 1 9586 10044
NP_523300.1 NC_003298_p5 protein kinase phrog_2828 serine-threonine kinase other 1 1796 2905
NP_523321.1 NC_003298_p26 gene 5.1 protein singleton unknown function unknown function 1 13686 13775
NP_523320.1 NC_003298_p25 DNA polymerase phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism 1 13043 15157
NP_523338.1 NC_003298_p43 internal virion protein A phrog_308 internal virion protein head and packaging 1 25521 25931
NP_523330.1 NC_003298_p35 hypothetical protein phrog_1391 unknown function unknown function 1 17484 17735
NP_523350.1 NC_003298_p55 hypothetical protein phrog_2193 unknown function unknown function 1 37595 37744
NP_523331.1 NC_003298_p36 tail assembly protein phrog_1320 host range and adsorption protein moron, auxiliary metabolic gene and host takeover 1 17762 18082
NP_523324.1 NC_003298_p29 host protein H-NS-interacting protein phrog_1452 Gp5.5-like host HNS inhibition moron, auxiliary metabolic gene and host takeover 1 15487 15783
NP_523333.1 NC_003298_p38 capsid assembly protein phrog_1052 head assembly head and packaging 1 19802 20734
NP_523339.1 NC_003298_p44 internal virion protein B phrog_805 internal virion protein head and packaging 1 25934 26527
NP_523328.1 NC_003298_p33 gene 6.3 protein phrog_5008 unknown function unknown function 1 17027 17140
NP_523348.1 NC_003298_p53 hypothetical protein phrog_23017 unknown function unknown function 1 36237 36677
NP_523297.1 NC_003298_p2 0.3B protein phrog_2226 SAM-dependent methyltransferase other 1 982 1359
NP_523325.1 NC_003298_p30 hypothetical protein phrog_1334 unknown function unknown function 1 15783 15992
NP_523303.1 NC_003298_p8 hypothetical protein phrog_2490 unknown function unknown function 1 6082 6222