Genomic map of Burkholderia virus phiE125 (NC_003309)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_003309
Definition
Burkholderia phage phiE125, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Stanholtvirus.
DB of origin
REFSEQ
Length
53373
Host Name
Burkholderia thailandensis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
71
%GC
61.19
Number of singletons
8
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
NP_536384.1 NC_003309_p28 hypothetical protein phrog_8011 unknown function unknown function 1 23815 24693
NP_536420.1 NC_003309_p64 hypothetical protein phrog_131 HNH endonuclease DNA, RNA and nucleotide metabolism 1 48843 49181
NP_536358.1 NC_003309_p2 terminase (large subunit) phrog_9 terminase large subunit head and packaging 1 541 2253
NP_536377.1 NC_003309_p21 tail tip fiber protein phrog_31 central tail fiber J tail 1 17143 20448
NP_536413.1 NC_003309_p57 DNA cytosine methylase phrog_67 DNA methyltransferase other 1 43452 44588
NP_536367.1 NC_003309_p11 hypothetical protein phrog_347 tail terminator connector 1 7630 7977
NP_536357.1 NC_003309_p1 terminase (small subunit) phrog_83 terminase small subunit head and packaging 1 46 531
NP_536405.1 NC_003309_p49 hypothetical protein phrog_20909 unknown function unknown function -1 39862 39993
NP_536373.1 NC_003309_p17 hypothetical protein phrog_12499 tail fiber protein tail 1 13695 15083
NP_536426.1 NC_003309_p70 hypothetical protein phrog_1213 RelE-like toxin moron, auxiliary metabolic gene and host takeover -1 52600 52857
NP_536366.1 NC_003309_p10 hypothetical protein phrog_5 tail completion or Neck1 protein connector 1 7211 7633
NP_536415.1 NC_003309_p59 chromosome partitioning protein phrog_1033 ParB-like partition protein DNA, RNA and nucleotide metabolism 1 45618 46439
NP_536417.1 NC_003309_p61 hypothetical protein phrog_678 replication initiation O-like DNA, RNA and nucleotide metabolism 1 46850 47842
NP_536380.1 NC_003309_p24 class II holin phrog_20 holin lysis 1 21536 21748
NP_536361.1 NC_003309_p5 capsid assembly protein/protease phrog_53 head maturation protease head and packaging 1 3759 4664
NP_536364.1 NC_003309_p8 hypothetical protein phrog_442 head-tail adaptor connector 1 6326 6892
NP_536404.1 NC_003309_p48 hypothetical protein phrog_15089 unknown function unknown function -1 39170 39586
NP_536378.1 NC_003309_p22 hypothetical protein phrog_2427 unknown function unknown function 1 20445 20759
NP_536398.1 NC_003309_p42 hypothetical protein phrog_20322 unknown function unknown function -1 35192 35863
NP_536408.1 NC_003309_p52 hypothetical protein singleton unknown function unknown function 1 40747 40935
NP_536397.1 NC_003309_p41 hypothetical protein phrog_1672 unknown function unknown function -1 34794 35195
NP_536385.1 NC_003309_p29 hypothetical protein phrog_5348 unknown function unknown function 1 24875 25435
NP_536427.1 NC_003309_p71 class I holin phrog_144 HNH endonuclease DNA, RNA and nucleotide metabolism 1 52916 53272
NP_536409.1 NC_003309_p53 repressor protein phrog_12107 transcriptional repressor transcription regulation -1 41163 41555
NP_536389.1 NC_003309_p33 hypothetical protein phrog_1599 unknown function unknown function 1 28145 28816
NP_536425.1 NC_003309_p69 helix-turn-helix transcriptional regulator phrog_7241 transcriptional regulator transcription regulation -1 52217 52603
NP_536372.1 NC_003309_p16 minor tail protein phrog_14 minor tail protein tail 1 13348 13686
NP_536418.1 NC_003309_p62 hypothetical protein phrog_190 Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 48035 48388
NP_536394.1 NC_003309_p38 hypothetical protein singleton unknown function unknown function -1 32128 33180
NP_536406.1 NC_003309_p50 hypothetical protein phrog_16318 unknown function unknown function -1 40003 40278
NP_536382.1 NC_003309_p26 hypothetical protein phrog_2466 Rz-like spanin lysis 1 22227 22775
NP_536395.1 NC_003309_p39 transposase OrfB phrog_157 transposase integration and excision -1 33350 34204
NP_536369.1 NC_003309_p13 tail assembly chaperone proteing phrog_344 tail assembly chaperone tail 1 8519 8989
NP_536379.1 NC_003309_p23 hypothetical protein phrog_4062 unknown function unknown function 1 20759 21493
NP_536424.1 NC_003309_p68 hypothetical protein phrog_38563 unknown function unknown function 1 50482 51876
NP_536416.1 NC_003309_p60 hypothetical protein phrog_4617 replication initiation protein DNA, RNA and nucleotide metabolism 1 46436 46696
NP_536365.1 NC_003309_p9 hypothetical protein phrog_25 head closure Hc1 connector 1 6892 7218
NP_536421.1 NC_003309_p65 hypothetical protein phrog_12620 unknown function unknown function 1 49172 49516
NP_536393.1 NC_003309_p37 hypothetical protein phrog_2045 unknown function unknown function -1 31139 32131
NP_536401.1 NC_003309_p45 hypothetical protein phrog_32105 unknown function unknown function -1 37667 37816
NP_536396.1 NC_003309_p40 ISBt3 transposase subunit protein phrog_151 transposase integration and excision -1 34261 34539
NP_536363.1 NC_003309_p7 hypothetical protein phrog_38773 unknown function unknown function 1 6134 6319
NP_536399.1 NC_003309_p43 hypothetical protein phrog_2600 unknown function unknown function -1 35877 36671
NP_536381.1 NC_003309_p25 lysozyme phrog_7 endolysin lysis 1 21826 22230
NP_536362.1 NC_003309_p6 major capsid protein phrog_10 major head protein head and packaging 1 4767 6074
NP_536422.1 NC_003309_p66 hypothetical protein phrog_12352 unknown function unknown function 1 49492 49752
NP_536370.1 NC_003309_p14 hypothetical protein phrog_337 tail protein tail 1 8989 9273
NP_536423.1 NC_003309_p67 hypothetical protein phrog_17923 unknown function unknown function 1 49761 50408
NP_536412.1 NC_003309_p56 hypothetical protein phrog_101 CII-like transcriptional activator transcription regulation 1 43007 43447
NP_536411.1 NC_003309_p55 hypothetical protein singleton unknown function unknown function -1 42567 42821
NP_536376.1 NC_003309_p20 tail component protein phrog_32 tail assembly protein tail 1 16562 17146
NP_536414.1 NC_003309_p58 PAPS reductase/sulfotransferase phrog_424 phosphoadenosine phosphosulfate reductase moron, auxiliary metabolic gene and host takeover 1 44585 45583
NP_536403.1 NC_003309_p47 hypothetical protein singleton unknown function unknown function 1 38919 39173
NP_536386.1 NC_003309_p30 hypothetical protein phrog_7616 unknown function unknown function 1 25432 26166
NP_536375.1 NC_003309_p19 tail component protein phrog_30 minor tail protein tail 1 15783 16565
NP_536419.1 NC_003309_p63 hypothetical protein phrog_20293 unknown function unknown function 1 48385 48741
NP_536371.1 NC_003309_p15 tail length tape measure protein phrog_339 tail length tape measure protein tail 1 9287 13351
NP_536388.1 NC_003309_p32 hypothetical protein phrog_17852 unknown function unknown function -1 27418 28059
NP_536410.1 NC_003309_p54 hypothetical protein phrog_26982 unknown function unknown function 1 42006 42338
NP_536400.1 NC_003309_p44 hypothetical protein phrog_200 lipoprotein other -1 36858 37670
NP_536391.1 NC_003309_p35 hypothetical protein singleton unknown function unknown function -1 30292 30609
NP_536407.1 NC_003309_p51 hypothetical protein singleton unknown function unknown function 1 40519 40662
NP_536390.1 NC_003309_p34 site-specific integrase phrog_1 integrase integration and excision -1 29192 30292
NP_536392.1 NC_003309_p36 hypothetical protein singleton unknown function unknown function -1 30642 31142
NP_536360.1 NC_003309_p4 portal protein phrog_12 portal protein head and packaging 1 2440 3699
NP_536368.1 NC_003309_p12 major tail subunit protein phrog_158 major tail protein tail 1 8039 8497
NP_536359.1 NC_003309_p3 hypothetical protein phrog_502 membrane protein moron, auxiliary metabolic gene and host takeover 1 2250 2435
NP_536387.1 NC_003309_p31 hypothetical protein phrog_6456 unknown function unknown function 1 26194 27285
NP_536383.1 NC_003309_p27 DNA adenine methylase phrog_56 DNA methyltransferase other 1 22918 23706
NP_536374.1 NC_003309_p18 minor tail protein phrog_18 minor tail protein tail 1 15080 15763
NP_536402.1 NC_003309_p46 hypothetical protein singleton unknown function unknown function 1 38065 38718