| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_003356 |
Definition |
Enterobacteria phage phiP27, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae. |
DB of origin |
REFSEQ |
Length |
42575 |
Host Name |
Escherichia coli |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
58 |
%GC |
49.35 |
Number of singletons |
6 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| NP_543093.1 | NC_003356_p41 | hypothetical protein | phrog_40 | head-tail adaptor Ad1 | connector | 1 | 27404 | 27727 |
| NP_543097.1 | NC_003356_p45 | hypothetical protein | phrog_185 | tail tube protein | tail | 1 | 30854 | 31210 |
| NP_543091.1 | NC_003356_p39 | prohead protease | phrog_80 | head maturation protease | head and packaging | 1 | 25470 | 26120 |
| NP_543073.1 | NC_003356_p21 | antitermination protein Q | phrog_79 | anti-termination protein Q-like | transcription regulation | 1 | 13791 | 14171 |
| NP_543063.1 | NC_003356_p11 | lambda repressor | phrog_4 | transcriptional repressor | transcription regulation | -1 | 6095 | 6751 |
| NP_543065.1 | NC_003356_p13 | hypothetical protein | singleton | unknown function | unknown function | -1 | 7104 | 7775 |
| NP_543090.1 | NC_003356_p38 | portal protein | phrog_12 | portal protein | head and packaging | 1 | 24251 | 25492 |
| NP_543107.1 | NC_003356_p55 | tail fiber assembly protein | phrog_136 | tail fiber assembly protein | tail | 1 | 39637 | 40185 |
| NP_543060.1 | NC_003356_p8 | hypothetical protein | phrog_5451 | unknown function | unknown function | -1 | 4632 | 4997 |
| NP_543077.1 | NC_003356_p25 | shiga toxin 2e A-subunit | phrog_866 | Shiga toxin subunit A | moron, auxiliary metabolic gene and host takeover | 1 | 17502 | 18461 |
| NP_543084.1 | NC_003356_p32 | hypothetical protein | singleton | unknown function | unknown function | 1 | 20630 | 20785 |
| NP_543096.1 | NC_003356_p44 | sheath protein | phrog_165 | tail sheath | tail | 1 | 29358 | 30854 |
| NP_543080.1 | NC_003356_p28 | holin | phrog_198 | holin | lysis | 1 | 19114 | 19548 |
| NP_543110.1 | NC_003356_p58 | hypothetical protein | singleton | unknown function | unknown function | 1 | 42399 | 42575 |
| NP_543069.1 | NC_003356_p17 | hypothetical protein | phrog_270 | replication initiation protein | DNA, RNA and nucleotide metabolism | 1 | 10334 | 11260 |
| NP_543058.1 | NC_003356_p6 | hypothetical protein | phrog_1515 | unknown function | unknown function | -1 | 3669 | 4307 |
| NP_543072.1 | NC_003356_p20 | hypothetical protein | phrog_2565 | unknown function | unknown function | 1 | 13549 | 13791 |
| NP_543056.1 | NC_003356_p4 | hypothetical protein | phrog_3409 | unknown function | unknown function | -1 | 2068 | 2511 |
| NP_543101.1 | NC_003356_p49 | tail protein | phrog_177 | baseplate hub | tail | 1 | 34977 | 36032 |
| NP_543053.1 | NC_003356_p1 | integrase | phrog_1 | integrase | integration and excision | -1 | 30 | 1343 |
| NP_543095.1 | NC_003356_p43 | hypothetical protein | phrog_209 | portal protein | head and packaging | 1 | 28627 | 29190 |
| NP_543085.1 | NC_003356_p33 | hypothetical protein | phrog_1935 | unknown function | unknown function | 1 | 20985 | 21332 |
| NP_543100.1 | NC_003356_p48 | hypothetical protein | phrog_184 | baseplate hub | tail | 1 | 33589 | 34980 |
| NP_543088.1 | NC_003356_p36 | terminase | phrog_9 | terminase large subunit | head and packaging | 1 | 22345 | 24057 |
| NP_543054.1 | NC_003356_p2 | excisionase | phrog_539 | excisionase | integration and excision | -1 | 1399 | 1635 |
| NP_543094.1 | NC_003356_p42 | hypothetical protein | phrog_879 | tail completion or Neck1 protein | connector | 1 | 28067 | 28630 |
| NP_543098.1 | NC_003356_p46 | hypothetical protein | phrog_166 | tail protein | tail | 1 | 31210 | 31539 |
| NP_543086.1 | NC_003356_p34 | hypothetical protein | phrog_144 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 21394 | 21744 |
| NP_543106.1 | NC_003356_p54 | tail fiber protein | phrog_6859 | tail fiber protein | tail | 1 | 38636 | 39634 |
| NP_543099.1 | NC_003356_p47 | tail protein | phrog_28 | tail length tape measure protein | tail | 1 | 31624 | 33573 |
| NP_543092.1 | NC_003356_p40 | major capsid protein | phrog_10 | major head protein | head and packaging | 1 | 26134 | 27357 |
| NP_543057.1 | NC_003356_p5 | serine protease | phrog_200 | lipoprotein | other | -1 | 2480 | 3307 |
| NP_543087.1 | NC_003356_p35 | hypothetical protein | phrog_83 | terminase small subunit | head and packaging | 1 | 21860 | 22330 |
| NP_543061.1 | NC_003356_p9 | hypothetical protein | singleton | unknown function | unknown function | 1 | 5106 | 5285 |
| NP_543108.1 | NC_003356_p56 | tail fiber protein | phrog_2636 | tail fiber protein | tail | 1 | 40209 | 41681 |
| NP_543083.1 | NC_003356_p31 | hypothetical protein | singleton | unknown function | unknown function | 1 | 20136 | 20351 |
| NP_543066.1 | NC_003356_p14 | hypothetical protein | phrog_63 | anti-repressor Ant | transcription regulation | 1 | 7876 | 8583 |
| NP_543105.1 | NC_003356_p53 | hypothetical protein | phrog_203 | baseplate wedge subunit | tail | 1 | 38059 | 38649 |
| NP_543070.1 | NC_003356_p18 | replication protein DnaC | phrog_50 | DnaC-like helicase loader | DNA, RNA and nucleotide metabolism | 1 | 11391 | 12149 |
| NP_543075.1 | NC_003356_p23 | hypothetical protein | phrog_331 | unknown function | unknown function | 1 | 15711 | 15908 |
| NP_543089.1 | NC_003356_p37 | integral membrane protein | phrog_502 | membrane protein | moron, auxiliary metabolic gene and host takeover | 1 | 24069 | 24251 |
| NP_543079.1 | NC_003356_p27 | hypothetical protein | singleton | unknown function | unknown function | -1 | 18788 | 18985 |
| NP_543062.1 | NC_003356_p10 | hypothetical protein | phrog_4739 | unknown function | unknown function | -1 | 5575 | 5991 |
| NP_543059.1 | NC_003356_p7 | hypothetical protein | phrog_340 | unknown function | unknown function | -1 | 4247 | 4450 |
| NP_543071.1 | NC_003356_p19 | helicase | phrog_19 | DnaB-like replicative helicase | DNA, RNA and nucleotide metabolism | 1 | 12146 | 13537 |
| NP_543055.1 | NC_003356_p3 | hypothetical protein | phrog_285 | unknown function | unknown function | -1 | 1794 | 2159 |
| NP_543068.1 | NC_003356_p16 | hypothetical protein | phrog_995 | transcriptional regulator | transcription regulation | 1 | 9457 | 10116 |
| NP_543082.1 | NC_003356_p30 | endolysin | phrog_465 | endolysin | lysis | 1 | 19816 | 20193 |
| NP_543104.1 | NC_003356_p52 | hypothetical protein | phrog_6 | baseplate wedge subunit | tail | 1 | 36977 | 38059 |
| NP_543076.1 | NC_003356_p24 | DNA methylase | phrog_67 | DNA methyltransferase | other | 1 | 16059 | 17117 |
| NP_543102.1 | NC_003356_p50 | baseplate assembly protein | phrog_11 | baseplate spike | tail | 1 | 36032 | 36565 |
| NP_543074.1 | NC_003356_p22 | hypothetical protein | phrog_1847 | unknown function | unknown function | 1 | 14266 | 15495 |
| NP_543064.1 | NC_003356_p12 | hypothetical protein | phrog_4749 | unknown function | unknown function | 1 | 6863 | 7090 |
| NP_543067.1 | NC_003356_p15 | hypothetical protein | phrog_130 | anti-repressor Ant | transcription regulation | 1 | 8636 | 9460 |
| NP_543081.1 | NC_003356_p29 | holin | phrog_217 | holin | lysis | 1 | 19538 | 19813 |
| NP_543109.1 | NC_003356_p57 | hypothetical protein | phrog_1141 | tail fiber protein | tail | 1 | 41678 | 42244 |
| NP_543103.1 | NC_003356_p51 | hypothetical protein | phrog_180 | baseplate wedge subunit | tail | 1 | 36571 | 36984 |
| NP_543078.1 | NC_003356_p26 | shiga toxin 2e B-subunit | phrog_851 | Shiga toxin subunit B | moron, auxiliary metabolic gene and host takeover | 1 | 18474 | 18737 |