Genomic map of Lactococcus phage ul36 (NC_004066)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_004066
Definition
Lactococcus phage ul36, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.
DB of origin
REFSEQ
Length
36798
Host Name
Lactococcus lactis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
61
%GC
35.83
Number of singletons
0
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
NP_663666.1 NC_004066_p33 hypothetical protein phrog_13719 unknown function unknown function 1 15329 15508
NP_663675.1 NC_004066_p42 hypothetical protein phrog_918 unknown function unknown function 1 21544 21813
NP_663638.1 NC_004066_p4 hypothetical protein phrog_87 metallo-protease other -1 3246 3833
NP_663678.1 NC_004066_p45 hypothetical protein phrog_132 head-tail adaptor connector 1 23686 24018
NP_663640.1 NC_004066_p6 cro-like repressor phrog_3 transcriptional repressor transcription regulation 1 4643 4867
NP_663669.1 NC_004066_p36 hypothetical protein phrog_2198 Alt-like transcription activator transcription regulation 1 16358 16780
NP_663654.1 NC_004066_p21 hypothetical protein phrog_7446 unknown function unknown function 1 11295 11465
NP_663650.1 NC_004066_p17 hypothetical protein phrog_50 DnaC-like helicase loader DNA, RNA and nucleotide metabolism 1 9616 10341
NP_663684.1 NC_004066_p52 tape-measure protein phrog_58 tail length tape measure protein tail 1 26378 28591
NP_663691.1 NC_004066_p59 holin phrog_881 holin lysis 1 34854 35078
YP_001210364.1 NC_004066_p61 hypothetical protein phrog_26180 unknown function unknown function -1 36405 36608
NP_663648.1 NC_004066_p15 single stranded binding protein phrog_44 single strand DNA binding protein DNA, RNA and nucleotide metabolism 1 8284 8709
NP_663647.1 NC_004066_p14 translation initiation factor phrog_1097 Erf-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 7533 8291
YP_001210363.1 NC_004066_p47 hypothetical protein phrog_5 tail completion or Neck1 protein connector 1 24323 24649
NP_663652.1 NC_004066_p19 hypothetical protein phrog_3109 unknown function unknown function 1 10730 10969
NP_663692.1 NC_004066_p60 lysin phrog_291 endolysin lysis 1 35075 36364
NP_663677.1 NC_004066_p44 major capsid protein phrog_840 major head protein head and packaging 1 22552 23415
NP_663663.1 NC_004066_p30 hypothetical protein phrog_7406 unknown function unknown function 1 14518 14736
NP_663653.1 NC_004066_p20 hypothetical protein phrog_5080 unknown function unknown function 1 11080 11286
NP_663645.1 NC_004066_p12 transcription regulator phrog_4416 transcriptional regulator transcription regulation 1 6845 7030
NP_663680.1 NC_004066_p48 structural protein phrog_176 tail terminator connector 1 24646 25035
NP_663671.1 NC_004066_p38 terminase large subunit phrog_38 terminase large subunit head and packaging 1 17461 18849
NP_663643.1 NC_004066_p9 hypothetical protein phrog_7263 unknown function unknown function 1 6021 6254
NP_663674.1 NC_004066_p41 hypothetical protein phrog_20139 unknown function unknown function 1 21306 21515
NP_663683.1 NC_004066_p51 hypothetical protein phrog_441 tail assembly chaperone tail 1 26093 26362
NP_663657.1 NC_004066_p24 hypothetical protein phrog_121 unknown function unknown function 1 11765 12478
NP_663660.1 NC_004066_p27 hypothetical protein phrog_1494 unknown function unknown function 1 13240 13437
NP_663651.1 NC_004066_p18 RusA-like resolvase phrog_140 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 10338 10727
NP_663673.1 NC_004066_p40 hypothetical protein phrog_115 minor head protein head and packaging 1 20215 21255
NP_663685.1 NC_004066_p53 structural protein phrog_33 distal tail protein Dit tail 1 28601 29362
NP_663667.1 NC_004066_p34 hypothetical protein phrog_22390 unknown function unknown function 1 15646 16110
NP_663636.1 NC_004066_p2 hypothetical protein phrog_7115 unknown function unknown function -1 1701 2075
NP_663662.1 NC_004066_p29 hypothetical protein phrog_1071 DNA methyltransferase other 1 13779 14471
NP_663661.1 NC_004066_p28 hypothetical protein phrog_3808 unknown function unknown function 1 13430 13792
NP_663690.1 NC_004066_p58 hypothetical protein phrog_6453 unknown function unknown function 1 34562 34864
NP_663664.1 NC_004066_p31 hypothetical protein phrog_2670 unknown function unknown function 1 14733 14969
NP_663665.1 NC_004066_p32 hypothetical protein phrog_8817 unknown function unknown function 1 15150 15332
NP_663642.1 NC_004066_p8 hypothetical protein phrog_823 unknown function unknown function 1 5623 5958
NP_663682.1 NC_004066_p50 hypothetical protein phrog_183 tail chaperone protein tail 1 25659 26009
NP_663672.1 NC_004066_p39 portal protein phrog_64 portal protein head and packaging 1 18850 20211
NP_663687.1 NC_004066_p55 structural protein phrog_8913 minor head protein head and packaging 1 32128 33096
NP_663656.1 NC_004066_p23 hypothetical protein phrog_5602 unknown function unknown function 1 11677 11829
NP_663658.1 NC_004066_p25 dUTPase phrog_135 dUTPase DNA, RNA and nucleotide metabolism 1 12475 12894
NP_663686.1 NC_004066_p54 structural protein phrog_1067 minor head protein head and packaging 1 29389 32115
NP_663688.1 NC_004066_p56 structural protein phrog_5983 tail protein tail 1 33047 33958
NP_663668.1 NC_004066_p35 hypothetical protein phrog_26874 unknown function unknown function 1 16107 16280
NP_663681.1 NC_004066_p49 major tail protein phrog_238 major tail protein tail 1 25046 25543
NP_663676.1 NC_004066_p43 scaffolding protein phrog_2932 head scaffolding protein head and packaging 1 21938 22534
NP_663679.1 NC_004066_p46 hypothetical protein phrog_348 minor head protein head and packaging 1 24015 24326
NP_663659.1 NC_004066_p26 hypothetical protein phrog_6209 unknown function unknown function 1 12897 13253
NP_663637.1 NC_004066_p3 hypothetical protein phrog_17949 unknown function unknown function -1 2118 3185
NP_663646.1 NC_004066_p13 hypothetical protein phrog_4729 unknown function unknown function 1 7129 7524
NP_663655.1 NC_004066_p22 hypothetical protein phrog_7240 unknown function unknown function 1 11478 11684
NP_663641.1 NC_004066_p7 anti-repressor phrog_373 anti-repressor transcription regulation 1 4894 5610
NP_663639.2 NC_004066_p5 cI-like repressor phrog_8 transcriptional regulator transcription regulation -1 3843 4370
NP_663635.1 NC_004066_p1 integrase phrog_1 integrase integration and excision -1 502 1581
NP_663644.1 NC_004066_p11 hypothetical protein phrog_5450 unknown function unknown function 1 6590 6826
NP_663670.1 NC_004066_p37 terminase small subunit phrog_51 terminase small subunit head and packaging 1 17058 17468
YP_001210362.1 NC_004066_p10 hypothetical protein phrog_6258 unknown function unknown function -1 6209 6487
NP_663649.2 NC_004066_p16 replisome organizer phrog_5708 DnaD-like helicase loader DNA, RNA and nucleotide metabolism 1 8834 9616
NP_663689.1 NC_004066_p57 structural protein phrog_35784 baseplate protein tail 1 33977 34474