| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_004167 |
Definition |
Bacteriophage phi-105 DNA, complete sequence. |
Molecule type |
DNA |
Genome structure |
circular |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae. |
DB of origin |
REFSEQ |
Length |
39325 |
Host Name |
Bacillus subtilis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
51 |
%GC |
42.69 |
Number of singletons |
4 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| NP_690785.1 | NC_004167_p32 | protein of an unannotated phage | phrog_95 | integrase | integration and excision | -1 | 25528 | 26952 |
| NP_690761.1 | NC_004167_p8 | protein of an unannotated phage | phrog_37579 | unknown function | unknown function | 1 | 5623 | 5937 |
| NP_690783.1 | NC_004167_p30 | protein of an unannotated phage | phrog_5208 | unknown function | unknown function | 1 | 24170 | 25135 |
| NP_690792.1 | NC_004167_p39 | protein of an unannotated phage | phrog_1366 | unknown function | unknown function | 1 | 29686 | 30621 |
| NP_690803.1 | NC_004167_p50 | protein of an unannotated phage | phrog_144 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 38622 | 38996 |
| NP_690802.1 | NC_004167_p49 | protein of an unannotated phage | phrog_37894 | unknown function | unknown function | 1 | 37965 | 38366 |
| NP_690759.1 | NC_004167_p6 | protein of an unannotated phage | phrog_80 | head maturation protease | head and packaging | 1 | 3752 | 4378 |
| NP_690793.1 | NC_004167_p40 | protein of an unannotated phage | phrog_722 | unknown function | unknown function | 1 | 30611 | 30925 |
| NP_690764.1 | NC_004167_p11 | protein of an unannotated phage | phrog_25 | head closure Hc1 | connector | 1 | 6805 | 7164 |
| NP_690799.1 | NC_004167_p46 | protein of an unannotated phage | phrog_8017 | unknown function | unknown function | 1 | 35800 | 36138 |
| NP_690756.1 | NC_004167_p3 | protein of an unannotated phage | phrog_7331 | terminase large subunit | head and packaging | 1 | 1979 | 2275 |
| NP_690757.1 | NC_004167_p4 | protein of an unannotated phage | phrog_1142 | unknown function | unknown function | 1 | 2288 | 2506 |
| NP_690768.1 | NC_004167_p15 | protein of an unannotated phage | phrog_187 | head-tail adaptor | connector | 1 | 8572 | 8910 |
| NP_690797.1 | NC_004167_p44 | protein of an unannotated phage | phrog_3490 | ERCC4-type nuclease | DNA, RNA and nucleotide metabolism | 1 | 34541 | 35080 |
| NP_690795.1 | NC_004167_p42 | protein of an unannotated phage | phrog_1829 | DNA primase | DNA, RNA and nucleotide metabolism | 1 | 31445 | 33865 |
| NP_690786.1 | NC_004167_p33 | protein of an unannotated phage | phrog_87 | metallo-protease | other | -1 | 26998 | 27444 |
| NP_690788.1 | NC_004167_p35 | protein of an unannotated phage | phrog_3 | transcriptional repressor | transcription regulation | 1 | 28154 | 28432 |
| NP_690771.1 | NC_004167_p18 | protein of an unannotated phage | phrog_33 | distal tail protein Dit | tail | 1 | 13133 | 13825 |
| NP_690777.1 | NC_004167_p24 | protein of an unannotated phage | phrog_134 | unknown function | unknown function | 1 | 19747 | 19935 |
| NP_690784.1 | NC_004167_p31 | protein of an unannotated phage | singleton | unknown function | unknown function | 1 | 25171 | 25461 |
| NP_690758.1 | NC_004167_p5 | protein of an unannotated phage | phrog_12 | portal protein | head and packaging | 1 | 2512 | 3762 |
| NP_690800.1 | NC_004167_p47 | protein of an unannotated phage | phrog_248 | transcriptional activator | transcription regulation | 1 | 36303 | 36680 |
| NP_690804.1 | NC_004167_p51 | protein of an unannotated phage | phrog_1315 | unknown function | unknown function | 1 | 38965 | 39291 |
| NP_690787.1 | NC_004167_p34 | protein of an unannotated phage | phrog_8 | transcriptional regulator | transcription regulation | -1 | 27458 | 27892 |
| NP_690769.1 | NC_004167_p16 | protein of an unannotated phage | phrog_1533 | tail length tape measure protein | tail | 1 | 9111 | 12167 |
| NP_690781.1 | NC_004167_p28 | protein of an unannotated phage | phrog_34206 | unknown function | unknown function | -1 | 22295 | 23239 |
| NP_690772.1 | NC_004167_p19 | protein of an unannotated phage | singleton | unknown function | unknown function | 1 | 13837 | 14769 |
| NP_690790.1 | NC_004167_p37 | protein of an unannotated phage | phrog_14041 | unknown function | unknown function | 1 | 28658 | 28927 |
| NP_690765.1 | NC_004167_p12 | protein of an unannotated phage | phrog_5 | tail completion or Neck1 protein | connector | 1 | 7157 | 7540 |
| NP_690762.1 | NC_004167_p9 | protein of an unannotated phage | phrog_10972 | tail fiber protein | tail | 1 | 5965 | 6510 |
| NP_690773.1 | NC_004167_p20 | protein of an unannotated phage | singleton | unknown function | unknown function | 1 | 14801 | 15541 |
| NP_690779.1 | NC_004167_p26 | protein of an unannotated phage | phrog_9611 | endolysin | lysis | 1 | 20456 | 21358 |
| NP_690754.1 | NC_004167_p1 | protein of an unannotated phage | phrog_83 | terminase small subunit | head and packaging | 1 | 60 | 566 |
| NP_690755.1 | NC_004167_p2 | protein of an unannotated phage | phrog_9 | terminase large subunit | head and packaging | 1 | 612 | 1862 |
| NP_690794.1 | NC_004167_p41 | protein of an unannotated phage | phrog_378 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 30946 | 31383 |
| NP_690767.1 | NC_004167_p14 | protein of an unannotated phage | phrog_88 | major tail protein | tail | 1 | 7918 | 8520 |
| NP_690778.1 | NC_004167_p25 | protein of an unannotated phage | phrog_199 | holin | lysis | 1 | 20002 | 20409 |
| NP_690798.1 | NC_004167_p45 | protein of an unannotated phage | phrog_513 | transposase | integration and excision | 1 | 35110 | 35625 |
| NP_690791.1 | NC_004167_p38 | protein of an unannotated phage | phrog_2205 | Mu Gam-like end protection | DNA, RNA and nucleotide metabolism | 1 | 29128 | 29682 |
| NP_690770.1 | NC_004167_p17 | protein of an unannotated phage | singleton | unknown function | unknown function | 1 | 12139 | 12987 |
| NP_690763.1 | NC_004167_p10 | protein of an unannotated phage | phrog_40 | head-tail adaptor Ad1 | connector | 1 | 6525 | 6872 |
| NP_690774.1 | NC_004167_p21 | protein of an unannotated phage | phrog_4775 | pre-neck appendage protein | connector | 1 | 15581 | 18142 |
| NP_690789.1 | NC_004167_p36 | protein of an unannotated phage | phrog_27878 | unknown function | unknown function | 1 | 28501 | 28671 |
| NP_690776.1 | NC_004167_p23 | protein of an unannotated phage | phrog_1766 | tail fiber protein | tail | 1 | 19388 | 19750 |
| NP_690760.1 | NC_004167_p7 | protein of an unannotated phage | phrog_10 | major head protein | head and packaging | 1 | 4418 | 5611 |
| NP_690775.1 | NC_004167_p22 | protein of an unannotated phage | phrog_3285 | minor tail protein | tail | 1 | 18159 | 19391 |
| NP_690782.1 | NC_004167_p29 | protein of an unannotated phage | phrog_32320 | unknown function | unknown function | -1 | 23247 | 23771 |
| NP_690780.1 | NC_004167_p27 | protein of an unannotated phage | phrog_12746 | unknown function | unknown function | -1 | 21418 | 21993 |
| NP_690766.1 | NC_004167_p13 | protein of an unannotated phage | phrog_78 | tail terminator | connector | 1 | 7429 | 7917 |
| NP_690801.1 | NC_004167_p48 | protein of an unannotated phage | phrog_497 | toxin-antitoxin system HicB-like | moron, auxiliary metabolic gene and host takeover | -1 | 37112 | 37528 |
| NP_690796.1 | NC_004167_p43 | protein of an unannotated phage | phrog_9698 | unknown function | unknown function | 1 | 34107 | 34544 |