| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_004303 |
Definition |
Streptococcus phage O1205, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Brussowvirus. |
DB of origin |
REFSEQ |
Length |
43075 |
Host Name |
Streptococcus thermophilus |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
57 |
%GC |
38.26 |
Number of singletons |
0 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| NP_695110.1 | NC_004303_p32 | hypothetical protein | phrog_5279 | unknown function | unknown function | 1 | 20179 | 20340 |
| NP_695107.1 | NC_004303_p29 | hypothetical protein | phrog_172 | head scaffolding protein | head and packaging | 1 | 18142 | 18723 |
| NP_695091.1 | NC_004303_p13 | primase | phrog_864 | DNA primase | DNA, RNA and nucleotide metabolism | 1 | 7360 | 8874 |
| NP_695125.1 | NC_004303_p47 | hypothetical protein | phrog_1060 | unknown function | unknown function | 1 | 38008 | 38361 |
| NP_695120.1 | NC_004303_p42 | tail protein | phrog_588 | tail fiber protein and host specificity | tail | 1 | 29140 | 32160 |
| NP_695085.1 | NC_004303_p7 | hypothetical protein | phrog_1022 | unknown function | unknown function | 1 | 3230 | 3358 |
| NP_695086.1 | NC_004303_p8 | hypothetical protein | phrog_253 | Mu Gam-like end protection | DNA, RNA and nucleotide metabolism | 1 | 3616 | 4089 |
| NP_695104.1 | NC_004303_p26 | hypothetical protein | phrog_2 | terminase large subunit | head and packaging | 1 | 14316 | 15551 |
| NP_695115.1 | NC_004303_p37 | structural protein | phrog_238 | major tail protein | tail | 1 | 21745 | 22251 |
| NP_695094.1 | NC_004303_p16 | hypothetical protein | phrog_1982 | unknown function | unknown function | 1 | 9845 | 10081 |
| NP_695133.1 | NC_004303_p55 | hypothetical protein | phrog_33937 | unknown function | unknown function | 1 | 41904 | 42128 |
| NP_695112.1 | NC_004303_p34 | hypothetical protein | phrog_348 | minor head protein | head and packaging | 1 | 20690 | 21004 |
| NP_695106.1 | NC_004303_p28 | hypothetical protein | phrog_115 | minor head protein | head and packaging | 1 | 17062 | 17955 |
| NP_695128.1 | NC_004303_p50 | holin | phrog_297 | holin | lysis | 1 | 38948 | 39190 |
| NP_695087.1 | NC_004303_p9 | hypothetical protein | phrog_124 | Sak4-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 4086 | 4787 |
| NP_695124.1 | NC_004303_p46 | hypothetical protein | phrog_372 | tail protein | tail | 1 | 35980 | 37989 |
| NP_695080.1 | NC_004303_p2 | hypothetical protein | phrog_24502 | zinc-finger domain protein | other | -1 | 1216 | 1686 |
| NP_695132.1 | NC_004303_p54 | hypothetical protein | phrog_8487 | unknown function | unknown function | 1 | 41541 | 41876 |
| NP_695130.1 | NC_004303_p52 | hypothetical protein | phrog_11483 | unknown function | unknown function | 1 | 40679 | 40891 |
| NP_695101.1 | NC_004303_p23 | hypothetical protein | phrog_1814 | unknown function | unknown function | 1 | 12129 | 12839 |
| NP_695126.1 | NC_004303_p48 | hypothetical protein | phrog_1567 | unknown function | unknown function | 1 | 38368 | 38514 |
| NP_695134.1 | NC_004303_p56 | hypothetical protein | phrog_14794 | unknown function | unknown function | 1 | 42158 | 42484 |
| NP_695116.1 | NC_004303_p38 | hypothetical protein | phrog_183 | tail chaperone protein | tail | 1 | 22326 | 22679 |
| NP_695083.1 | NC_004303_p5 | hypothetical protein | phrog_3 | transcriptional repressor | transcription regulation | 1 | 2635 | 2874 |
| NP_695109.1 | NC_004303_p31 | structural protein | phrog_29 | major head protein | head and packaging | 1 | 19121 | 20167 |
| NP_695123.1 | NC_004303_p45 | hypothetical protein | phrog_10693 | host range and adsorption protein | moron, auxiliary metabolic gene and host takeover | 1 | 33448 | 35979 |
| NP_695100.1 | NC_004303_p22 | hypothetical protein | phrog_2131 | unknown function | unknown function | 1 | 11683 | 12123 |
| NP_695119.1 | NC_004303_p41 | hypothetical protein | phrog_202 | distal tail protein Dit | tail | 1 | 27602 | 29140 |
| NP_695105.1 | NC_004303_p27 | portal protein | phrog_64 | portal protein | head and packaging | 1 | 15560 | 17065 |
| NP_695097.1 | NC_004303_p19 | hypothetical protein | phrog_121 | unknown function | unknown function | 1 | 10397 | 10864 |
| NP_695084.1 | NC_004303_p6 | hypothetical protein | phrog_668 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 2888 | 3169 |
| NP_695135.1 | NC_004303_p57 | hypothetical protein | phrog_8 | transcriptional regulator | transcription regulation | 1 | 42486 | 42908 |
| NP_695081.1 | NC_004303_p3 | hypothetical protein | phrog_87 | metallo-protease | other | -1 | 1706 | 2092 |
| NP_695096.1 | NC_004303_p18 | hypothetical protein | phrog_1489 | unknown function | unknown function | 1 | 10242 | 10394 |
| NP_695098.1 | NC_004303_p20 | hypothetical protein | phrog_1994 | DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 10865 | 11410 |
| NP_695118.1 | NC_004303_p40 | tail protein | phrog_1204 | tail protein | tail | 1 | 23049 | 27602 |
| NP_695090.1 | NC_004303_p12 | hypothetical protein | phrog_695 | DNA polymerase/primase | DNA, RNA and nucleotide metabolism | 1 | 6564 | 7373 |
| NP_695113.1 | NC_004303_p35 | hypothetical protein | phrog_5 | tail completion or Neck1 protein | connector | 1 | 21004 | 21348 |
| NP_695121.1 | NC_004303_p43 | hypothetical protein | phrog_3267 | tail protein | tail | 1 | 32176 | 33297 |
| NP_695122.1 | NC_004303_p44 | hypothetical protein | phrog_7926 | helicase subunit of the DNA excision repair complex | DNA, RNA and nucleotide metabolism | 1 | 33297 | 33470 |
| NP_695089.1 | NC_004303_p11 | hypothetical protein | phrog_378 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 6100 | 6555 |
| NP_695129.1 | NC_004303_p51 | hypothetical protein | phrog_998 | endolysin | lysis | 1 | 39192 | 40037 |
| NP_695111.1 | NC_004303_p33 | hypothetical protein | phrog_132 | head-tail adaptor | connector | 1 | 20355 | 20693 |
| NP_695079.1 | NC_004303_p1 | integrase | phrog_1 | integrase | integration and excision | -1 | 23 | 1102 |
| NP_695108.1 | NC_004303_p30 | structural protein | phrog_909 | major head protein | head and packaging | 1 | 18743 | 19102 |
| NP_695088.1 | NC_004303_p10 | helicase | phrog_16 | DNA helicase | DNA, RNA and nucleotide metabolism | 1 | 4762 | 6093 |
| NP_695095.1 | NC_004303_p17 | hypothetical protein | phrog_803 | host nuclease inhibitor | moron, auxiliary metabolic gene and host takeover | 1 | 10072 | 10245 |
| NP_695099.1 | NC_004303_p21 | hypothetical protein | phrog_884 | unknown function | unknown function | 1 | 11376 | 11681 |
| NP_695131.1 | NC_004303_p53 | hypothetical protein | phrog_32666 | unknown function | unknown function | 1 | 40916 | 41353 |
| NP_695127.1 | NC_004303_p49 | holin | phrog_199 | holin | lysis | 1 | 38530 | 38955 |
| NP_695092.1 | NC_004303_p14 | hypothetical protein | phrog_9118 | unknown function | unknown function | 1 | 9128 | 9559 |
| NP_695102.1 | NC_004303_p24 | hypothetical protein | phrog_248 | transcriptional activator | transcription regulation | 1 | 13270 | 13686 |
| NP_695103.1 | NC_004303_p25 | small subunit of the terminase | phrog_51 | terminase small subunit | head and packaging | 1 | 13835 | 14329 |
| NP_695117.1 | NC_004303_p39 | hypothetical protein | phrog_441 | tail assembly chaperone | tail | 1 | 22742 | 23059 |
| NP_695114.1 | NC_004303_p36 | hypothetical protein | phrog_176 | tail terminator | connector | 1 | 21345 | 21731 |
| NP_695082.1 | NC_004303_p4 | repressor | phrog_8 | transcriptional regulator | transcription regulation | -1 | 2082 | 2486 |
| NP_695093.1 | NC_004303_p15 | hypothetical protein | phrog_5702 | Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 9601 | 9861 |