Genomic map of Thermus virus IN93 (NC_004462)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_004462
Definition
Thermus thermophilus phage IN93, complete genome.
Molecule type
DNA
Genome structure
circular
Taxonomy
Viruses; Varidnaviria; Helvetiavirae; Dividoviricota; Laserviricetes; Halopanivirales; Sphaerolipoviridae; Gammasphaerolipovirus.
DB of origin
REFSEQ
Length
19604
Host Name
Thermus thermophilus
Host domain
Bacteria
Is prophage?
undef
Number of proteins
39
%GC
65.93
Number of singletons
10
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_002048621.1 NC_004462_p33 hypothetical protein singleton unknown function unknown function 1 17960 18163
YP_002048622.1 NC_004462_p34 hypothetical protein phrog_29323 unknown function unknown function 1 18160 18336
NP_777331.1 NC_004462_p14 hypothetical protein phrog_32692 unknown function unknown function 1 6074 6589
NP_777350.1 NC_004462_p36 hypothetical protein singleton unknown function unknown function 1 18450 18758
NP_777329.2 NC_004462_p12 hypothetical protein phrog_2666 terminase large subunit head and packaging 1 4830 5510
NP_777337.1 NC_004462_p20 hypothetical protein phrog_34887 unknown function unknown function 1 9020 9322
NP_777328.1 NC_004462_p10 hypothetical protein phrog_15706 unknown function unknown function 1 4443 4646
NP_777336.1 NC_004462_p19 hypothetical protein phrog_35191 unknown function unknown function 1 8830 9030
NP_777334.1 NC_004462_p17 hypothetical protein phrog_35387 unknown function unknown function 1 7902 8156
NP_777326.1 NC_004462_p8 hypothetical protein phrog_31856 unknown function unknown function 1 3342 3863
NP_777339.1 NC_004462_p22 hypothetical protein phrog_36838 unknown function unknown function 1 10274 10726
NP_777332.1 NC_004462_p15 hypothetical protein phrog_36565 unknown function unknown function 1 6598 7473
NP_777330.1 NC_004462_p13 major structure protein phrog_32089 virion structural protein head and packaging 1 5647 6063
NP_777340.1 NC_004462_p23 hypothetical protein phrog_33523 unknown function unknown function 1 10804 11766
YP_002048623.1 NC_004462_p35 hypothetical protein phrog_36500 unknown function unknown function 1 18333 18446
NP_777345.1 NC_004462_p28 hypothetical protein singleton unknown function unknown function 1 14093 14350
NP_777338.1 NC_004462_p21 hypothetical protein phrog_36135 unknown function unknown function 1 9331 9564
NP_777349.3 NC_004462_p32 hypothetical protein phrog_4 transcriptional repressor transcription regulation -1 17187 17843
NP_777344.1 NC_004462_p27 hypothetical protein phrog_21776 transglycosylase other 1 13363 14082
NP_777341.1 NC_004462_p24 lysozyme phrog_4176 tail fiber protein tail 1 11925 12842
NP_777325.1 NC_004462_p7 hypothetical protein singleton unknown function unknown function 1 3027 3341
NP_777343.1 NC_004462_p26 hypothetical protein phrog_38718 unknown function unknown function 1 13131 13397
NP_777318.1 NC_004462_p1 hypothetical protein singleton unknown function unknown function 1 1 26
NP_777318.1 NC_004462_p1 hypothetical protein singleton unknown function unknown function 1 19403 19604
NP_777347.1 NC_004462_p30 hypothetical protein singleton unknown function unknown function -1 15696 16589
NP_777348.1 NC_004462_p31 hypothetical protein singleton unknown function unknown function -1 16721 17185
NP_777327.1 NC_004462_p9 hypothetical protein phrog_6700 endolysin lysis 1 3856 4446
NP_777323.1 NC_004462_p5 hypothetical protein phrog_29187 unknown function unknown function 1 2021 2314
NP_777321.1 NC_004462_p3 hypothetical protein phrog_29754 unknown function unknown function 1 1251 1595
YP_002048620.1 NC_004462_p11 hypothetical protein phrog_32686 unknown function unknown function 1 4646 4840
NP_777322.1 NC_004462_p4 hypothetical protein phrog_33914 unknown function unknown function 1 1615 2004
NP_777351.1 NC_004462_p37 hypothetical protein singleton unknown function unknown function 1 18767 18991
NP_777352.1 NC_004462_p39 hypothetical protein phrog_33729 unknown function unknown function 1 19146 19430
YP_002048624.1 NC_004462_p38 hypothetical protein singleton unknown function unknown function 1 18988 19167
NP_777346.2 NC_004462_p29 hypothetical protein phrog_1 integrase integration and excision -1 14482 15531
NP_777319.2 NC_004462_p2 hypothetical protein phrog_30283 unknown function unknown function 1 23 1261
NP_777342.1 NC_004462_p25 hypothetical protein phrog_19901 unknown function unknown function 1 12844 13119
NP_777324.1 NC_004462_p6 hypothetical protein phrog_30846 unknown function unknown function 1 2416 2976
NP_777335.1 NC_004462_p18 major structure protein phrog_34543 virion structural protein head and packaging 1 8153 8806
NP_777333.1 NC_004462_p16 hypothetical protein singleton unknown function unknown function 1 7486 7899