| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_004584 |
Definition |
Streptococcus prophage 315.1, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae. |
DB of origin |
REFSEQ |
Length |
39538 |
Host Name |
Streptococcus pyogenes |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
56 |
%GC |
37.8 |
Number of singletons |
1 |
Number of paralogs |
2 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| NP_795411.1 | NC_004584_p39 | major tail protein | phrog_88 | major tail protein | tail | 1 | 23174 | 23758 |
| NP_795391.1 | NC_004584_p19 | fragment of single strand binding protein | phrog_27667 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 11632 | 11817 |
| NP_795381.1 | NC_004584_p9 | hypothetical protein | phrog_6178 | unknown function | unknown function | 1 | 5943 | 6134 |
| NP_795387.1 | NC_004584_p15 | hypothetical protein | phrog_98 | unknown function | unknown function | 1 | 9800 | 10234 |
| NP_795417.1 | NC_004584_p45 | hyaluronidase | phrog_2332 | hyaluronidase | other | 1 | 31307 | 32314 |
| NP_795382.1 | NC_004584_p10 | DNA polymerase III delta prime subunit | phrog_19 | DnaB-like replicative helicase | DNA, RNA and nucleotide metabolism | 1 | 6430 | 7770 |
| NP_795410.1 | NC_004584_p38 | hypothetical protein | phrog_78 | tail terminator | connector | 1 | 22782 | 23162 |
| NP_795383.1 | NC_004584_p11 | hypothetical protein | phrog_428 | replication initiation protein | DNA, RNA and nucleotide metabolism | 1 | 7763 | 8524 |
| NP_795386.1 | NC_004584_p14 | hypothetical protein | phrog_17435 | unknown function | unknown function | 1 | 9577 | 9783 |
| NP_795421.1 | NC_004584_p49 | hypothetical protein | phrog_1296 | holin | lysis | 1 | 35315 | 35587 |
| NP_795425.1 | NC_004584_p53 | hypothetical protein | phrog_15475 | unknown function | unknown function | -1 | 37665 | 37904 |
| NP_795389.1 | NC_004584_p17 | hypothetical protein | phrog_1071 | DNA methyltransferase | other | 1 | 10517 | 11149 |
| NP_795384.1 | NC_004584_p12 | Similar to E. coli DnaC protein | phrog_3277 | DnaC-like helicase loader | DNA, RNA and nucleotide metabolism | 1 | 8833 | 9336 |
| NP_795375.1 | NC_004584_p3 | hypothetical protein | phrog_87 | metallo-protease | other | -1 | 2364 | 2756 |
| NP_795415.1 | NC_004584_p43 | tail protein | phrog_33 | distal tail protein Dit | tail | 1 | 28492 | 29262 |
| NP_795380.1 | NC_004584_p8 | hypothetical protein | phrog_668 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 5593 | 5850 |
| NP_795423.1 | NC_004584_p51 | cell wall amidase | phrog_1309 | endolysin | lysis | 1 | 35927 | 37135 |
| NP_795426.1 | NC_004584_p54 | hypothetical protein | phrog_18728 | unknown function | unknown function | -1 | 38168 | 38419 |
| NP_795402.1 | NC_004584_p30 | large terminase subunit | phrog_9 | terminase large subunit | head and packaging | 1 | 16317 | 18047 |
| NP_795398.1 | NC_004584_p26 | hypothetical protein | phrog_16923 | unknown function | unknown function | 1 | 14933 | 15136 |
| NP_795406.1 | NC_004584_p34 | hypothetical protein | phrog_933 | unknown function | unknown function | 1 | 21553 | 21726 |
| NP_795401.1 | NC_004584_p29 | hypothetical protein | phrog_2343 | terminase small subunit | head and packaging | 1 | 15987 | 16304 |
| NP_795414.1 | NC_004584_p42 | tail tapemeasure protein | phrog_1293 | tail length tape measure protein | tail | 1 | 24379 | 28479 |
| NP_795405.1 | NC_004584_p33 | major coat protein | phrog_10 | major head protein | head and packaging | 1 | 20406 | 21539 |
| NP_795397.1 | NC_004584_p25 | hypothetical protein | phrog_9949 | unknown function | unknown function | 1 | 14582 | 14875 |
| NP_795418.1 | NC_004584_p46 | hypothetical protein | phrog_1899 | unknown function | unknown function | 1 | 32324 | 34228 |
| NP_795373.1 | NC_004584_p1 | integrase | phrog_1 | integrase | integration and excision | -1 | 106 | 1302 |
| NP_795420.1 | NC_004584_p48 | hypothetical protein | phrog_1554 | unknown function | unknown function | 1 | 34671 | 35303 |
| NP_795394.1 | NC_004584_p22 | hypothetical protein | phrog_200 | lipoprotein | other | 1 | 12450 | 13277 |
| NP_795385.1 | NC_004584_p13 | hypothetical protein | phrog_1174 | unknown function | unknown function | 1 | 9336 | 9563 |
| NP_795393.1 | NC_004584_p21 | putaive immunity repressor protein | phrog_8 | transcriptional regulator | transcription regulation | 1 | 12110 | 12448 |
| NP_795390.1 | NC_004584_p18 | hypothetical protein | phrog_121 | unknown function | unknown function | 1 | 11154 | 11666 |
| NP_795412.1 | NC_004584_p40 | hypothetical protein | phrog_187 | head-tail adaptor | connector | 1 | 23851 | 24153 |
| NP_795427.1 | NC_004584_p55 | hypothetical protein | phrog_3399 | unknown function | unknown function | -1 | 38560 | 38706 |
| NP_795378.1 | NC_004584_p6 | hypothetical protein | phrog_3 | transcriptional repressor | transcription regulation | 1 | 3709 | 3921 |
| NP_795392.1 | NC_004584_p20 | hypothetical protein | phrog_12294 | unknown function | unknown function | 1 | 11832 | 12113 |
| NP_795388.1 | NC_004584_p16 | hypothetical protein | phrog_1027 | unknown function | unknown function | 1 | 10231 | 10515 |
| NP_795408.1 | NC_004584_p36 | hypothetical protein | phrog_25 | head closure Hc1 | connector | 1 | 22027 | 22389 |
| NP_795424.1 | NC_004584_p52 | hypothetical protein | phrog_14350 | unknown function | unknown function | -1 | 37251 | 37607 |
| NP_795413.1 | NC_004584_p41 | hypothetical protein | singleton | unknown function | unknown function | -1 | 24191 | 24394 |
| NP_795419.1 | NC_004584_p47 | hypothetical protein | phrog_1401 | unknown function | unknown function | 1 | 34240 | 34668 |
| NP_795400.1 | NC_004584_p28 | hypothetical protein | phrog_119 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 15574 | 15846 |
| NP_795416.1 | NC_004584_p44 | tail fiber protein | phrog_3095 | tail protein with endopeptidase activity | other | 1 | 29259 | 31310 |
| NP_795407.1 | NC_004584_p35 | hypothetical protein | phrog_749 | unknown function | unknown function | 1 | 21726 | 22034 |
| NP_795376.1 | NC_004584_p4 | repressor | phrog_8 | transcriptional regulator | transcription regulation | -1 | 2760 | 3149 |
| NP_795428.1 | NC_004584_p56 | hypothetical protein | phrog_3 | transcriptional repressor | transcription regulation | 1 | 38860 | 39069 |
| NP_795377.1 | NC_004584_p5 | hypothetical protein | phrog_16928 | unknown function | unknown function | 1 | 3399 | 3674 |
| NP_795422.1 | NC_004584_p50 | holin | phrog_297 | holin | lysis | 1 | 35584 | 35811 |
| NP_795409.1 | NC_004584_p37 | hypothetical protein | phrog_5 | tail completion or Neck1 protein | connector | 1 | 22391 | 22789 |
| NP_795396.1 | NC_004584_p24 | site-specific recombinase | phrog_216 | integrase | integration and excision | 1 | 13853 | 14428 |
| NP_795399.1 | NC_004584_p27 | hypothetical protein | phrog_3511 | unknown function | unknown function | 1 | 15162 | 15548 |
| NP_795379.1 | NC_004584_p7 | hypothetical protein | phrog_463 | anti-repressor | transcription regulation | 1 | 4800 | 5519 |
| NP_795403.1 | NC_004584_p31 | portal protein | phrog_12 | portal protein | head and packaging | 1 | 18415 | 19602 |
| NP_795374.1 | NC_004584_p2 | hypothetical protein | phrog_1412 | antitoxin mazE-like | moron, auxiliary metabolic gene and host takeover | -1 | 1613 | 2353 |
| NP_795395.1 | NC_004584_p23 | transcriptional activator | phrog_36 | transcriptional regulator | transcription regulation | 1 | 13379 | 13693 |
| NP_795404.1 | NC_004584_p32 | head maturation protease | phrog_94 | head maturation protease | head and packaging | 1 | 19583 | 20389 |