Genomic map of Streptococcus phage 315.2 (NC_004585)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_004585
Definition
Streptococcus prophage 315.2, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.
DB of origin
REFSEQ
Length
41072
Host Name
Streptococcus pyogenes
Host domain
Bacteria
Is prophage?
undef
Number of proteins
60
%GC
38.25
Number of singletons
3
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
NP_795451.1 NC_004585_p23 hypothetical protein phrog_9576 unknown function unknown function 1 12569 12982
NP_795478.1 NC_004585_p50 hyaluronidase N-terminal portion phrog_2332 hyaluronidase other 1 32536 33318
NP_795472.1 NC_004585_p44 hypothetical protein phrog_88 major tail protein tail 1 24568 25179
NP_795488.1 NC_004585_p60 hypothetical protein phrog_2133 unknown function unknown function 1 40714 40902
NP_795456.1 NC_004585_p28 hypothetical protein phrog_1071 DNA methyltransferase other 1 14758 15393
NP_795469.1 NC_004585_p41 hypothetical protein phrog_25 head closure Hc1 connector 1 23415 23753
NP_795455.1 NC_004585_p27 hypothetical protein phrog_2131 unknown function unknown function 1 14357 14758
NP_795440.1 NC_004585_p12 hypothetical protein phrog_3 transcriptional repressor transcription regulation 1 5811 5996
NP_795476.1 NC_004585_p48 hypothetical protein phrog_33 distal tail protein Dit tail 1 29691 30398
NP_795441.1 NC_004585_p13 hypothetical protein phrog_5866 unknown function unknown function 1 6074 6370
NP_795470.1 NC_004585_p42 hypothetical protein phrog_5 tail completion or Neck1 protein connector 1 23750 24127
NP_795487.1 NC_004585_p59 streptococcal superantigen SSA phrog_1753 enterotoxin type A / speL moron, auxiliary metabolic gene and host takeover 1 39819 40601
NP_795480.1 NC_004585_p52 hypothetical protein phrog_1899 unknown function unknown function 1 33565 35448
NP_795464.1 NC_004585_p36 hypothetical protein phrog_12 portal protein head and packaging 1 19898 21118
NP_795433.1 NC_004585_p5 hypothetical protein phrog_3634 unknown function unknown function -1 3099 3878
NP_795475.1 NC_004585_p47 hypothetical protein phrog_1293 tail length tape measure protein tail 1 25768 29691
NP_795435.1 NC_004585_p7 hypothetical protein phrog_5126 unknown function unknown function -1 4130 4516
NP_795445.1 NC_004585_p17 hypothetical protein phrog_124 Sak4-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 7543 8223
NP_795485.1 NC_004585_p57 cell wall hydrolase phrog_1309 endolysin lysis 1 37136 38344
NP_795458.1 NC_004585_p30 hypothetical protein singleton unknown function unknown function 1 16390 16695
NP_795467.1 NC_004585_p39 hypothetical protein singleton unknown function unknown function 1 22985 23113
NP_795481.1 NC_004585_p53 hypothetical protein phrog_1401 unknown function unknown function 1 35460 35891
NP_795462.1 NC_004585_p34 hypothetical protein phrog_502 membrane protein moron, auxiliary metabolic gene and host takeover 1 19435 19605
NP_795453.1 NC_004585_p25 hypothetical protein phrog_2625 unknown function unknown function 1 13283 13486
NP_795450.1 NC_004585_p22 DNA primase phrog_7601 unknown function unknown function 1 11435 12307
NP_795454.1 NC_004585_p26 DNA methyltransferase phrog_6151 DNA methyltransferase other 1 13792 14166
NP_795442.1 NC_004585_p14 hypothetical protein phrog_1022 unknown function unknown function 1 6367 6501
NP_795482.1 NC_004585_p54 hypothetical protein phrog_1554 unknown function unknown function 1 35894 36511
NP_795479.1 NC_004585_p51 hyaluronidase C-terminal portion singleton unknown function unknown function 1 33358 33480
NP_795461.1 NC_004585_p33 hypothetical protein phrog_9 terminase large subunit head and packaging 1 17684 19438
NP_795446.1 NC_004585_p18 DEAD box family helicase phrog_16 DNA helicase DNA, RNA and nucleotide metabolism 1 8325 9554
NP_795431.1 NC_004585_p3 hypothetical protein phrog_2253 unknown function unknown function 1 2819 2965
NP_795447.1 NC_004585_p19 hypothetical protein phrog_378 single strand DNA binding protein DNA, RNA and nucleotide metabolism 1 9570 10028
NP_795452.1 NC_004585_p24 hypothetical protein phrog_93 endonuclease DNA, RNA and nucleotide metabolism 1 12979 13299
NP_795443.1 NC_004585_p15 hypothetical protein phrog_8 transcriptional regulator transcription regulation 1 6517 6831
NP_795434.1 NC_004585_p6 hypothetical protein phrog_4345 unknown function unknown function 1 3935 4141
NP_795460.1 NC_004585_p32 hypothetical protein phrog_83 terminase small subunit head and packaging 1 17202 17669
NP_795448.1 NC_004585_p20 hypothetical protein phrog_695 DNA polymerase/primase DNA, RNA and nucleotide metabolism 1 10040 10843
NP_795484.1 NC_004585_p56 holin phrog_297 holin lysis 1 36793 37020
NP_795457.1 NC_004585_p29 hypothetical protein phrog_248 transcriptional activator transcription regulation 1 15666 16106
NP_795483.1 NC_004585_p55 hypothetical protein phrog_1296 holin lysis 1 36521 36796
NP_795459.1 NC_004585_p31 hypothetical protein phrog_589 HNH endonuclease DNA, RNA and nucleotide metabolism 1 16692 17030
NP_795486.1 NC_004585_p58 hypothetical protein phrog_5978 unknown function unknown function 1 38482 39606
NP_795430.1 NC_004585_p2 repressor protein phrog_4 transcriptional repressor transcription regulation -1 1669 2457
NP_795444.1 NC_004585_p16 hypothetical protein phrog_253 Mu Gam-like end protection DNA, RNA and nucleotide metabolism 1 7060 7542
NP_795432.1 NC_004585_p4 hypothetical protein phrog_19402 unknown function unknown function 1 2999 3163
NP_795437.1 NC_004585_p9 hypothetical protein phrog_7873 unknown function unknown function 1 4841 5086
NP_795436.1 NC_004585_p8 hypothetical protein phrog_3 transcriptional repressor transcription regulation 1 4590 4829
NP_795429.1 NC_004585_p1 integrase phrog_1 integrase integration and excision -1 146 1234
NP_795449.1 NC_004585_p21 DNA primase phrog_12939 DNA primase DNA, RNA and nucleotide metabolism 1 10833 11387
NP_795466.1 NC_004585_p38 hypothetical protein phrog_10 major head protein head and packaging 1 21787 22971
NP_795465.1 NC_004585_p37 ClpP protease ATP-dependent protease proteolytic subunit phrog_94 head maturation protease head and packaging 1 21096 21761
NP_795463.1 NC_004585_p35 hypothetical protein phrog_903 unknown function unknown function 1 19598 19864
NP_795477.1 NC_004585_p49 hypothetical protein phrog_2270 unknown function unknown function 1 30563 32539
NP_795468.1 NC_004585_p40 hypothetical protein phrog_40 head-tail adaptor Ad1 connector 1 23116 23418
NP_795439.1 NC_004585_p11 hypothetical protein phrog_8544 unknown function unknown function -1 5405 5644
NP_795471.1 NC_004585_p43 hypothetical protein phrog_78 tail terminator connector 1 24124 24549
NP_795473.1 NC_004585_p45 hypothetical protein phrog_187 head-tail adaptor connector 1 25232 25558
NP_795474.1 NC_004585_p46 hypothetical protein phrog_6190 unknown function unknown function 1 25588 25755
NP_795438.1 NC_004585_p10 hypothetical protein phrog_8768 unknown function unknown function -1 5045 5254