| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_004587 |
Definition |
Streptococcus prophage 315.4, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae. |
DB of origin |
REFSEQ |
Length |
41796 |
Host Name |
Streptococcus pyogenes |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
64 |
%GC |
38.57 |
Number of singletons |
4 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| NP_795543.1 | NC_004587_p3 | hypothetical protein | phrog_87 | metallo-protease | other | -1 | 1901 | 2281 |
| NP_795573.1 | NC_004587_p33 | hypothetical protein | phrog_7693 | acetyltransferase | other | 1 | 14845 | 15114 |
| NP_795604.1 | NC_004587_p64 | hypothetical protein | phrog_2133 | unknown function | unknown function | 1 | 41425 | 41607 |
| NP_795591.1 | NC_004587_p51 | hypothetical protein | phrog_33 | distal tail protein Dit | tail | 1 | 28803 | 29519 |
| NP_795566.1 | NC_004587_p26 | hypothetical protein | phrog_121 | unknown function | unknown function | 1 | 11184 | 11690 |
| NP_795571.1 | NC_004587_p31 | hypothetical protein | phrog_620 | ParB-like partition protein | DNA, RNA and nucleotide metabolism | 1 | 13548 | 14066 |
| NP_795549.1 | NC_004587_p9 | hypothetical protein | phrog_3150 | unknown function | unknown function | 1 | 4748 | 5002 |
| NP_795597.1 | NC_004587_p57 | hypothetical protein | phrog_1009 | unknown function | unknown function | 1 | 35636 | 35932 |
| NP_795557.1 | NC_004587_p17 | recombination protein | phrog_155 | Erf-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 7726 | 8400 |
| NP_795589.1 | NC_004587_p49 | hypothetical protein | phrog_706 | unknown function | unknown function | 1 | 24975 | 25556 |
| NP_795572.1 | NC_004587_p32 | ABC transporter ATP-binding protein | phrog_293 | ABC transporter | moron, auxiliary metabolic gene and host takeover | 1 | 14045 | 14722 |
| NP_795565.1 | NC_004587_p25 | hypothetical protein | phrog_2625 | unknown function | unknown function | 1 | 11017 | 11187 |
| NP_795580.1 | NC_004587_p40 | hypothetical protein | phrog_903 | unknown function | unknown function | 1 | 20642 | 20908 |
| NP_795564.1 | NC_004587_p24 | hypothetical protein | phrog_98 | unknown function | unknown function | 1 | 10616 | 11020 |
| NP_795595.1 | NC_004587_p55 | hypothetical protein | phrog_1401 | unknown function | unknown function | 1 | 34580 | 35011 |
| NP_795578.1 | NC_004587_p38 | minor capsid protein | phrog_581 | minor head protein | head and packaging | 1 | 18891 | 20369 |
| NP_795561.1 | NC_004587_p21 | hypothetical protein | phrog_4161 | unknown function | unknown function | 1 | 9811 | 10062 |
| NP_795560.1 | NC_004587_p20 | hypothetical protein | phrog_1921 | unknown function | unknown function | 1 | 9458 | 9814 |
| NP_795570.1 | NC_004587_p30 | hypothetical protein | singleton | unknown function | unknown function | -1 | 13210 | 13467 |
| NP_795598.1 | NC_004587_p58 | hypothetical protein | phrog_443 | holin | lysis | 1 | 35929 | 36114 |
| NP_795559.1 | NC_004587_p19 | hypothetical protein | phrog_140 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 9021 | 9461 |
| NP_795592.1 | NC_004587_p52 | hypothetical protein | phrog_2270 | unknown function | unknown function | 1 | 29516 | 31660 |
| NP_795581.1 | NC_004587_p41 | hypothetical protein | phrog_2303 | head scaffolding protein | head and packaging | 1 | 21040 | 21648 |
| NP_795562.1 | NC_004587_p22 | hypothetical protein | phrog_236 | nucleotide kinase | other | 1 | 10056 | 10340 |
| NP_795553.1 | NC_004587_p13 | hypothetical protein | phrog_4016 | replication initiation protein | DNA, RNA and nucleotide metabolism | 1 | 6192 | 6605 |
| NP_795548.1 | NC_004587_p8 | hypothetical protein | phrog_3292 | unknown function | unknown function | -1 | 4559 | 4759 |
| NP_795585.1 | NC_004587_p45 | minor capsid protein | phrog_556 | minor head protein | head and packaging | 1 | 23262 | 23618 |
| NP_795600.1 | NC_004587_p60 | hypothetical protein | phrog_1281 | unknown function | unknown function | 1 | 37567 | 38091 |
| NP_795603.1 | NC_004587_p63 | streptococcal phospholipase A2 | phrog_11353 | unknown function | unknown function | 1 | 40504 | 41079 |
| NP_795563.1 | NC_004587_p23 | hypothetical protein | phrog_5030 | unknown function | unknown function | 1 | 10337 | 10606 |
| NP_795546.1 | NC_004587_p6 | P1-type antirepressor | phrog_63 | anti-repressor Ant | transcription regulation | 1 | 3652 | 4380 |
| NP_795555.1 | NC_004587_p15 | hypothetical protein | phrog_2410 | unknown function | unknown function | 1 | 6967 | 7221 |
| NP_795567.1 | NC_004587_p27 | hypothetical protein | phrog_248 | transcriptional activator | transcription regulation | 1 | 12131 | 12571 |
| NP_795587.1 | NC_004587_p47 | major tail shaft protein | phrog_820 | major tail protein | tail | 1 | 24013 | 24498 |
| NP_795583.1 | NC_004587_p43 | hypothetical protein | phrog_541 | head-tail adaptor | connector | 1 | 22524 | 22940 |
| NP_795575.1 | NC_004587_p35 | hypothetical protein | phrog_2412 | unknown function | unknown function | 1 | 15603 | 16076 |
| NP_795541.1 | NC_004587_p1 | integrase | phrog_1 | integrase | integration and excision | -1 | 96 | 1250 |
| NP_795586.1 | NC_004587_p46 | minor capsid protein | phrog_913 | minor head protein | head and packaging | 1 | 23615 | 24013 |
| NP_795552.1 | NC_004587_p12 | replication protein | phrog_1456 | DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 5819 | 6070 |
| NP_795588.1 | NC_004587_p48 | hypothetical protein | phrog_1061 | unknown function | unknown function | 1 | 24537 | 24971 |
| NP_795551.1 | NC_004587_p11 | hypothetical protein | phrog_3050 | unknown function | unknown function | 1 | 5534 | 5719 |
| NP_795593.1 | NC_004587_p53 | hyaluronidase | phrog_2332 | hyaluronidase | other | 1 | 31657 | 32670 |
| NP_795584.1 | NC_004587_p44 | minor capsid protein | phrog_793 | head-tail adaptor | connector | 1 | 22900 | 23262 |
| NP_795569.1 | NC_004587_p29 | hypothetical protein | singleton | unknown function | unknown function | 1 | 13048 | 13311 |
| NP_795602.1 | NC_004587_p62 | streptococcal pyrogenic exotoxin SpeK | phrog_1753 | enterotoxin type A / speL | moron, auxiliary metabolic gene and host takeover | 1 | 39249 | 40028 |
| NP_795545.1 | NC_004587_p5 | hypothetical protein | phrog_1337 | DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 3450 | 3641 |
| NP_795599.1 | NC_004587_p59 | cell wall hydrolase, lysin | phrog_1309 | endolysin | lysis | 1 | 36225 | 37427 |
| NP_795590.1 | NC_004587_p50 | minor tail protein | phrog_1686 | tail length tape measure protein | tail | 1 | 25546 | 28806 |
| NP_795576.1 | NC_004587_p36 | terminase large subunit | phrog_2 | terminase large subunit | head and packaging | 1 | 16159 | 17370 |
| NP_795579.1 | NC_004587_p39 | hypothetical protein | phrog_11448 | unknown function | unknown function | 1 | 20341 | 20580 |
| NP_795601.1 | NC_004587_p61 | hypothetical protein | phrog_5763 | unknown function | unknown function | 1 | 38079 | 38945 |
| NP_795554.1 | NC_004587_p14 | hypothetical protein | phrog_3682 | unknown function | unknown function | 1 | 6586 | 6819 |
| NP_795542.1 | NC_004587_p2 | hypothetical protein | phrog_5214 | unknown function | unknown function | -1 | 1369 | 1890 |
| NP_795558.1 | NC_004587_p18 | single-strand DNA-binding protein | phrog_44 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 8393 | 8812 |
| NP_795596.1 | NC_004587_p56 | hypothetical protein | phrog_1554 | unknown function | unknown function | 1 | 35014 | 35625 |
| NP_795568.1 | NC_004587_p28 | hypothetical protein | singleton | unknown function | unknown function | 1 | 12699 | 12938 |
| NP_795594.1 | NC_004587_p54 | hypothetical protein | phrog_1899 | unknown function | unknown function | 1 | 32685 | 34568 |
| NP_795556.1 | NC_004587_p16 | hypothetical protein | phrog_253 | Mu Gam-like end protection | DNA, RNA and nucleotide metabolism | 1 | 7243 | 7725 |
| NP_795582.1 | NC_004587_p42 | major capsid/head protein | phrog_544 | major head protein | head and packaging | 1 | 21652 | 22470 |
| NP_795574.1 | NC_004587_p34 | hypothetical protein | phrog_3136 | unknown function | unknown function | 1 | 15175 | 15552 |
| NP_795544.1 | NC_004587_p4 | repressor | phrog_8 | transcriptional regulator | transcription regulation | -1 | 2295 | 2654 |
| NP_795550.1 | NC_004587_p10 | hypothetical protein | singleton | unknown function | unknown function | 1 | 5161 | 5505 |
| NP_795577.1 | NC_004587_p37 | minor capsid protein | phrog_533 | portal protein | head and packaging | 1 | 17384 | 18886 |
| NP_795547.1 | NC_004587_p7 | hypothetical protein | phrog_4621 | unknown function | unknown function | 1 | 4413 | 4562 |